RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 RPL39LQ96EH5 51 aaKnown RBP9.42□□□□□ -0.9
SSBP4-214ENST00000607020 CARHSP1Q9Y2V2 147 aaKnown RBP9.42□□□□□ -0.9
SSBP4-214ENST00000607020 hDV102S1A0JD36 115 aa9.41□□□□□ -0.9
SSBP4-214ENST00000607020 S100A8P05109 93 aa9.41□□□□□ -0.9
SSBP4-214ENST00000607020 FAM104BQ5XKR9 115 aa9.41□□□□□ -0.9
SSBP4-214ENST00000607020 MRAP2Q96G30 205 aa9.41□□□□□ -0.9
SSBP4-214ENST00000607020 CTDSP1Q9GZU7 261 aa9.41□□□□□ -0.9
SSBP4-214ENST00000607020 AP5S1Q9NUS5 200 aa9.41□□□□□ -0.9
SSBP4-214ENST00000607020 TRAV8-4A0A0B4J246 113 aa9.4□□□□□ -0.9
SSBP4-214ENST00000607020 TRBV25-1A0A075B6N4 114 aa9.39□□□□□ -0.91
SSBP4-214ENST00000607020 TRBV6-5A0A0K0K1A5 114 aa9.39□□□□□ -0.91
SSBP4-214ENST00000607020 PRR3P79522 188 aaKnown RBP9.39□□□□□ -0.91
SSBP4-214ENST00000607020 IQCJQ1A5X6 159 aa9.39□□□□□ -0.91
SSBP4-214ENST00000607020 IMMP2LQ96T52 175 aa9.39□□□□□ -0.91
SSBP4-214ENST00000607020 IGHV1-24A0A0C4DH33 117 aa9.38□□□□□ -0.91
SSBP4-214ENST00000607020 SDHAF1A6NFY7 115 aa9.38□□□□□ -0.91
SSBP4-214ENST00000607020 SMKR1H3BMG3 65 aa9.38□□□□□ -0.91
SSBP4-214ENST00000607020 NCR2O95944 276 aa9.38□□□□□ -0.91
SSBP4-214ENST00000607020 RPS10P46783 165 aaKnown RBP9.38□□□□□ -0.91
SSBP4-214ENST00000607020 REG3AQ06141 175 aa9.38□□□□□ -0.91
SSBP4-214ENST00000607020 MRPL51Q4U2R6 128 aaKnown RBP9.38□□□□□ -0.91
SSBP4-214ENST00000607020 CLPSL2Q6UWE3 100 aa9.38□□□□□ -0.91
SSBP4-214ENST00000607020 SPINK6Q6UWN8 80 aa9.38□□□□□ -0.91
SSBP4-214ENST00000607020 BTF3L4Q96K17 158 aa9.38□□□□□ -0.91
SSBP4-214ENST00000607020 GAGE6Q13070 117 aa9.37□□□□□ -0.91
SSBP4-214ENST00000607020 COTL1Q14019 142 aa9.37□□□□□ -0.91
SSBP4-214ENST00000607020 RHEBQ15382 184 aa9.37□□□□□ -0.91
SSBP4-214ENST00000607020 REG3GQ6UW15 175 aa9.37□□□□□ -0.91
SSBP4-214ENST00000607020 ST20Q9HBF5 79 aa9.37□□□□□ -0.91
SSBP4-214ENST00000607020 TMEM242Q9NWH2 141 aa9.37□□□□□ -0.91
SSBP4-214ENST00000607020 C7orf77A4D0Y5 90 aa9.36□□□□□ -0.91
SSBP4-214ENST00000607020 PPP1R17O96001 155 aa9.36□□□□□ -0.91
SSBP4-214ENST00000607020 SRSF9Q13242 221 aaKnown RBP eCLIP9.36□□□□□ -0.91
SSBP4-214ENST00000607020 NRACQ8N912 160 aa9.36□□□□□ -0.91
SSBP4-214ENST00000607020 IGLV10-54A0A075B6I4 117 aa9.35□□□□□ -0.91
SSBP4-214ENST00000607020 A0A1B0GUV1 79 aa9.35□□□□□ -0.91
SSBP4-214ENST00000607020 APOC3P02656 99 aa9.35□□□□□ -0.91
SSBP4-214ENST00000607020 CKS2P33552 79 aa9.35□□□□□ -0.91
SSBP4-214ENST00000607020 NDUFA5Q16718 116 aa9.35□□□□□ -0.91
SSBP4-214ENST00000607020 C20orf203Q8NBC4 194 aa9.35□□□□□ -0.91
SSBP4-214ENST00000607020 TMEM243Q9BU79 118 aa9.35□□□□□ -0.91
SSBP4-214ENST00000607020 TRAV9-1A0A075B6T8 112 aa9.34□□□□□ -0.91
SSBP4-214ENST00000607020 I3L3M4 83 aa9.34□□□□□ -0.91
SSBP4-214ENST00000607020 S100PP25815 95 aa9.34□□□□□ -0.91
SSBP4-214ENST00000607020 AMTP48728 403 aa9.34□□□□□ -0.91
SSBP4-214ENST00000607020 POLR2KP53803 58 aaKnown RBP9.34□□□□□ -0.91
SSBP4-214ENST00000607020 COX6A2Q02221 97 aa9.34□□□□□ -0.91
SSBP4-214ENST00000607020 SVBPQ8N300 66 aa9.34□□□□□ -0.91
SSBP4-214ENST00000607020 RPS10P5Q9NQ39 176 aa9.34□□□□□ -0.91
SSBP4-214ENST00000607020 TRBV27A0A0K0K1C4 114 aa9.33□□□□□ -0.92
SSBP4-214ENST00000607020 D6R8Y8 96 aa9.33□□□□□ -0.92
SSBP4-214ENST00000607020 APCSP02743 223 aa9.33□□□□□ -0.92
SSBP4-214ENST00000607020 PPBPP02775 128 aa9.33□□□□□ -0.92
SSBP4-214ENST00000607020 PMCHP20382 165 aa9.33□□□□□ -0.92
SSBP4-214ENST00000607020 SUMO2P61956 95 aaKnown RBP9.33□□□□□ -0.92
SSBP4-214ENST00000607020 TRBV24-1A0A075B6N3 115 aa9.32□□□□□ -0.92
SSBP4-214ENST00000607020 SNAPINO95295 136 aa9.32□□□□□ -0.92
SSBP4-214ENST00000607020 TSHBP01222 138 aa9.32□□□□□ -0.92
SSBP4-214ENST00000607020 MAJINQ3KP22 176 aa9.32□□□□□ -0.92
SSBP4-214ENST00000607020 CFAP161Q6P656 301 aa9.32□□□□□ -0.92
SSBP4-214ENST00000607020 PRSS3P2Q8NHM4 247 aa9.32□□□□□ -0.92
SSBP4-214ENST00000607020 C20orf78Q9BR46 151 aa9.32□□□□□ -0.92
SSBP4-214ENST00000607020 VCYO14598 125 aa9.31□□□□□ -0.92
SSBP4-214ENST00000607020 UBE2L6O14933 153 aa9.31□□□□□ -0.92
SSBP4-214ENST00000607020 TNFRSF6BO95407 300 aa9.31□□□□□ -0.92
SSBP4-214ENST00000607020 ORMDL3Q8N138 153 aa9.31□□□□□ -0.92
SSBP4-214ENST00000607020 STPG4Q8N801 248 aa9.31□□□□□ -0.92
SSBP4-214ENST00000607020 IGLV4-60A0A075B6I1 120 aa9.3□□□□□ -0.92
SSBP4-214ENST00000607020 RPL32P62910 135 aaKnown RBP9.3□□□□□ -0.92
SSBP4-214ENST00000607020 TMEM136Q6ZRR5 245 aa9.3□□□□□ -0.92
SSBP4-214ENST00000607020 SLC7A5P1Q8MH63 180 aa9.3□□□□□ -0.92
SSBP4-214ENST00000607020 C15orf56Q8N910 161 aa9.3□□□□□ -0.92
SSBP4-214ENST00000607020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.29□□□□□ -0.92
SSBP4-214ENST00000607020 IGKV2-29A2NJV5 120 aaPredicted RBP9.29□□□□□ -0.92
SSBP4-214ENST00000607020 NPYP01303 97 aa9.29□□□□□ -0.92
SSBP4-214ENST00000607020 PRELID3AQ96N28 172 aa9.29□□□□□ -0.92
SSBP4-214ENST00000607020 KIR2DL4Q99706 377 aa9.29□□□□□ -0.92
SSBP4-214ENST00000607020 LINC00474Q9P2X8 69 aa9.29□□□□□ -0.92
SSBP4-214ENST00000607020 LPAP08519 4548 aa9.29□□□□□ -0.92
SSBP4-214ENST00000607020 H7C423 109 aa9.28□□□□□ -0.92
SSBP4-214ENST00000607020 ESDP10768 282 aa9.28□□□□□ -0.92
SSBP4-214ENST00000607020 FCER1GP30273 86 aa9.28□□□□□ -0.92
SSBP4-214ENST00000607020 SMIM2Q9BVW6 85 aa9.28□□□□□ -0.92
SSBP4-214ENST00000607020 KRTAP9-2Q9BYQ4 174 aa9.28□□□□□ -0.92
SSBP4-214ENST00000607020 LAMTOR2Q9Y2Q5 125 aa9.28□□□□□ -0.92
SSBP4-214ENST00000607020 IGKV2-24A0A0C4DH68 120 aa9.27□□□□□ -0.93
SSBP4-214ENST00000607020 Q6ZRP5 223 aa9.27□□□□□ -0.93
SSBP4-214ENST00000607020 FGF6P10767 208 aa9.26□□□□□ -0.93
SSBP4-214ENST00000607020 AMMECR1LQ6DCA0 310 aa9.26□□□□□ -0.93
SSBP4-214ENST00000607020 GNB1LQ9BYB4 327 aa9.26□□□□□ -0.93
SSBP4-214ENST00000607020 MUC2Q02817 5179 aa9.25□□□□□ -0.93
SSBP4-214ENST00000607020 GVQW2A0A096LPI5 108 aaPredicted RBP9.25□□□□□ -0.93
SSBP4-214ENST00000607020 GAGE12HA6NDE8 117 aa9.25□□□□□ -0.93
SSBP4-214ENST00000607020 TCAPO15273 167 aa9.25□□□□□ -0.93
SSBP4-214ENST00000607020 ZNF25P17030 456 aaPredicted RBP9.25□□□□□ -0.93
SSBP4-214ENST00000607020 COX19Q49B96 90 aa9.25□□□□□ -0.93
SSBP4-214ENST00000607020 A0A096LNI7 61 aa9.24□□□□□ -0.93
SSBP4-214ENST00000607020 TGIF2-C20orf24A0A0A6YYL0 155 aa9.24□□□□□ -0.93
SSBP4-214ENST00000607020 PRSS47A8MTI9 375 aa9.24□□□□□ -0.93
SSBP4-214ENST00000607020 MT-ND6P03923 174 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms