RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 HERVK_113P63121 156 aa10.98□□□□□ -0.65
LYSMD4-211ENST00000604213 CRYBG3Q68DQ2 2970 aa10.98□□□□□ -0.65
LYSMD4-211ENST00000604213 DGAT2L7PQ6IED9 249 aa10.98□□□□□ -0.65
LYSMD4-211ENST00000604213 SMIM1B2RUZ4 78 aa10.97□□□□□ -0.65
LYSMD4-211ENST00000604213 RS1O15537 224 aa10.97□□□□□ -0.65
LYSMD4-211ENST00000604213 TRACP01848 142 aa10.97□□□□□ -0.65
LYSMD4-211ENST00000604213 ATP5J2P56134 94 aa10.97□□□□□ -0.65
LYSMD4-211ENST00000604213 DAZ2Q13117 558 aaKnown RBP10.97□□□□□ -0.65
LYSMD4-211ENST00000604213 DAZ4Q86SG3 579 aaKnown RBP10.97□□□□□ -0.65
LYSMD4-211ENST00000604213 LINC00643Q86TS7 51 aa10.97□□□□□ -0.65
LYSMD4-211ENST00000604213 DAZ3Q9NR90 486 aaKnown RBP10.97□□□□□ -0.65
LYSMD4-211ENST00000604213 C22orf24Q9Y442 160 aa10.97□□□□□ -0.65
LYSMD4-211ENST00000604213 MAP1AP78559 2803 aaPredicted RBP10.96□□□□□ -0.65
LYSMD4-211ENST00000604213 CSPG4Q6UVK1 2322 aa10.96□□□□□ -0.65
LYSMD4-211ENST00000604213 SDIM1Q6ZPB5 146 aa10.96□□□□□ -0.65
LYSMD4-211ENST00000604213 C3orf56Q8N813 242 aa10.96□□□□□ -0.65
LYSMD4-211ENST00000604213 COPS9Q8WXC6 57 aa10.96□□□□□ -0.65
LYSMD4-211ENST00000604213 LY6DQ14210 128 aa10.96□□□□□ -0.66
LYSMD4-211ENST00000604213 FAM19A3Q7Z5A8 133 aa10.96□□□□□ -0.66
LYSMD4-211ENST00000604213 TMEM126AQ9H061 195 aa10.96□□□□□ -0.66
LYSMD4-211ENST00000604213 CREBBPQ92793 2442 aa10.95□□□□□ -0.66
LYSMD4-211ENST00000604213 B4DSR2 109 aa10.95□□□□□ -0.66
LYSMD4-211ENST00000604213 BAALC-AS2P0C853 105 aa10.95□□□□□ -0.66
LYSMD4-211ENST00000604213 NDUFA7O95182 113 aa10.95□□□□□ -0.66
LYSMD4-211ENST00000604213 LINC00694P0DN24 101 aa10.95□□□□□ -0.66
LYSMD4-211ENST00000604213 UBE2E2Q96LR5 201 aa10.95□□□□□ -0.66
LYSMD4-211ENST00000604213 FAM218AQ96MZ4 157 aa10.94□□□□□ -0.66
LYSMD4-211ENST00000604213 SLURP1P55000 103 aa10.94□□□□□ -0.66
LYSMD4-211ENST00000604213 PRIMA1Q86XR5 153 aa10.94□□□□□ -0.66
LYSMD4-211ENST00000604213 GNLYP22749 145 aa10.93□□□□□ -0.66
LYSMD4-211ENST00000604213 CELSR2Q9HCU4 2923 aa10.92□□□□□ -0.66
LYSMD4-211ENST00000604213 F5H768 121 aa10.92□□□□□ -0.66
LYSMD4-211ENST00000604213 FAM222AQ5U5X8 452 aa10.92□□□□□ -0.66
LYSMD4-211ENST00000604213 PEMTQ9UBM1 199 aa10.92□□□□□ -0.66
LYSMD4-211ENST00000604213 TRAV13-1A0A0B4J241 112 aa10.91□□□□□ -0.66
LYSMD4-211ENST00000604213 C18orf65Q6ZTR6 163 aa10.91□□□□□ -0.66
LYSMD4-211ENST00000604213 DEFB136Q30KP8 78 aa10.91□□□□□ -0.66
LYSMD4-211ENST00000604213 ZNF702PQ9H963 129 aa10.91□□□□□ -0.66
LYSMD4-211ENST00000604213 CSDC2Q9Y534 153 aaKnown RBP10.91□□□□□ -0.66
LYSMD4-211ENST00000604213 PPDPFQ9H3Y8 114 aa10.9□□□□□ -0.66
LYSMD4-211ENST00000604213 MAP6D1Q9H9H5 199 aa10.9□□□□□ -0.66
LYSMD4-211ENST00000604213 SPG11Q96JI7 2443 aa10.9□□□□□ -0.66
LYSMD4-211ENST00000604213 INSP01308 110 aa10.9□□□□□ -0.66
LYSMD4-211ENST00000604213 NTM-AS1Q6ZSK4 140 aa10.9□□□□□ -0.66
LYSMD4-211ENST00000604213 C5orf38Q86SI9 138 aa10.9□□□□□ -0.66
LYSMD4-211ENST00000604213 C3orf22Q8N5N4 141 aa10.9□□□□□ -0.66
LYSMD4-211ENST00000604213 CXCL5P42830 114 aa10.88□□□□□ -0.67
LYSMD4-211ENST00000604213 HIST2H2BCQ6DN03 193 aa10.88□□□□□ -0.67
LYSMD4-211ENST00000604213 HIST2H2BDQ6DRA6 164 aa10.88□□□□□ -0.67
LYSMD4-211ENST00000604213 CDC42SE2Q9NRR3 84 aa10.88□□□□□ -0.67
LYSMD4-211ENST00000604213 VPREB3Q9UKI3 123 aa10.88□□□□□ -0.67
LYSMD4-211ENST00000604213 C9orf153Q5TBE3 101 aa10.88□□□□□ -0.67
LYSMD4-211ENST00000604213 Q96MF0 132 aa10.88□□□□□ -0.67
LYSMD4-211ENST00000604213 ATP5G1P05496 136 aa10.87□□□□□ -0.67
LYSMD4-211ENST00000604213 INAFM2P0DMQ5 153 aa10.87□□□□□ -0.67
LYSMD4-211ENST00000604213 RPL28P46779 137 aaKnown RBP10.87□□□□□ -0.67
LYSMD4-211ENST00000604213 Q9HAA7 133 aa10.87□□□□□ -0.67
LYSMD4-211ENST00000604213 UQCRQO14949 82 aa10.87□□□□□ -0.67
LYSMD4-211ENST00000604213 MALP21145 153 aa10.87□□□□□ -0.67
LYSMD4-211ENST00000604213 GAGE2AQ6NT46 116 aa10.86□□□□□ -0.67
LYSMD4-211ENST00000604213 LINC00526Q96FQ7 95 aa10.86□□□□□ -0.67
LYSMD4-211ENST00000604213 TRAV13-2A0A0B4J235 113 aa10.85□□□□□ -0.67
LYSMD4-211ENST00000604213 PF4P02776 101 aa10.85□□□□□ -0.67
LYSMD4-211ENST00000604213 RPL36AP83881 106 aaKnown RBP10.85□□□□□ -0.67
LYSMD4-211ENST00000604213 IL17DQ8TAD2 202 aa10.85□□□□□ -0.67
LYSMD4-211ENST00000604213 RPL36ALQ969Q0 106 aaKnown RBP10.85□□□□□ -0.67
LYSMD4-211ENST00000604213 LINC01356Q8N9X3 169 aa10.85□□□□□ -0.67
LYSMD4-211ENST00000604213 XCL2Q9UBD3 114 aa10.85□□□□□ -0.67
LYSMD4-211ENST00000604213 TRGV1A0A0A0MS02 117 aa10.84□□□□□ -0.67
LYSMD4-211ENST00000604213 TRBV10-1A0A0K0K1A3 114 aa10.84□□□□□ -0.67
LYSMD4-211ENST00000604213 K7EQD1 137 aa10.84□□□□□ -0.67
LYSMD4-211ENST00000604213 LINC00337Q8N6G1 96 aa10.84□□□□□ -0.67
LYSMD4-211ENST00000604213 IGKV2-28A0A075B6P5 120 aa10.83□□□□□ -0.68
LYSMD4-211ENST00000604213 IGKV2D-28P01615 120 aa10.83□□□□□ -0.68
LYSMD4-211ENST00000604213 CRPP02741 224 aa10.83□□□□□ -0.68
LYSMD4-211ENST00000604213 C1orf158Q8N1D5 194 aa10.83□□□□□ -0.68
LYSMD4-211ENST00000604213 HIST1H4AP62805 103 aaKnown RBP10.82□□□□□ -0.68
LYSMD4-211ENST00000604213 DEFB114Q30KQ6 69 aa10.82□□□□□ -0.68
LYSMD4-211ENST00000604213 Q6YL49 198 aa10.82□□□□□ -0.68
LYSMD4-211ENST00000604213 DYNLRB2Q8TF09 96 aa10.82□□□□□ -0.68
LYSMD4-211ENST00000604213 ITPR1Q14643 2758 aa10.82□□□□□ -0.68
LYSMD4-211ENST00000604213 CFAP161Q6P656 301 aa10.82□□□□□ -0.68
LYSMD4-211ENST00000604213 MIR7-3HGQ8N6C7 128 aa10.82□□□□□ -0.68
LYSMD4-211ENST00000604213 C2orf48Q96LS8 159 aa10.82□□□□□ -0.68
LYSMD4-211ENST00000604213 SPTBN4Q9H254 2564 aa10.81□□□□□ -0.68
LYSMD4-211ENST00000604213 A0A087WYN8 130 aa10.81□□□□□ -0.68
LYSMD4-211ENST00000604213 J3QLI3 93 aa10.81□□□□□ -0.68
LYSMD4-211ENST00000604213 COX7CP15954 63 aa10.81□□□□□ -0.68
LYSMD4-211ENST00000604213 DSCR9P59020 149 aa10.81□□□□□ -0.68
LYSMD4-211ENST00000604213 C9orf129Q5T035 196 aaKnown RBP10.81□□□□□ -0.68
LYSMD4-211ENST00000604213 Q6ZTI0 123 aa10.81□□□□□ -0.68
LYSMD4-211ENST00000604213 SND1-IT1Q9HBX3 110 aa10.81□□□□□ -0.68
LYSMD4-211ENST00000604213 NCOR2Q9Y618 2525 aa10.8□□□□□ -0.68
LYSMD4-211ENST00000604213 SMIM11BQ8TCY0 68 aa10.8□□□□□ -0.68
LYSMD4-211ENST00000604213 COX7B2Q8TF08 81 aa10.8□□□□□ -0.68
LYSMD4-211ENST00000604213 NRGNQ92686 78 aa10.8□□□□□ -0.68
LYSMD4-211ENST00000604213 OVOL2Q9BRP0 275 aa10.8□□□□□ -0.68
LYSMD4-211ENST00000604213 A0A096LNT2 108 aa10.79□□□□□ -0.68
LYSMD4-211ENST00000604213 ODF3L2Q3SX64 289 aa10.79□□□□□ -0.68
LYSMD4-211ENST00000604213 TMEM243Q9BU79 118 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms