RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 MALP21145 153 aa7.01□□□□□ -1.29
PDLIM1P1-201ENST00000604187 RPL35P42766 123 aaKnown RBP7.01□□□□□ -1.29
PDLIM1P1-201ENST00000604187 EIF5AL1Q6IS14 154 aaKnown RBP7.01□□□□□ -1.29
PDLIM1P1-201ENST00000604187 LYZL1Q6UWQ5 148 aa7.01□□□□□ -1.29
PDLIM1P1-201ENST00000604187 TMUB2Q71RG4 321 aa7.01□□□□□ -1.29
PDLIM1P1-201ENST00000604187 RPL39LQ96EH5 51 aaKnown RBP7.01□□□□□ -1.29
PDLIM1P1-201ENST00000604187 OPRPNQ99935 248 aaPredicted RBP7.01□□□□□ -1.29
PDLIM1P1-201ENST00000604187 FXYD6-FXYD2A0A087WZ82 144 aa7□□□□□ -1.29
PDLIM1P1-201ENST00000604187 FAM168BA1KXE4 195 aa7□□□□□ -1.29
PDLIM1P1-201ENST00000604187 BCL2L11O43521 198 aa7□□□□□ -1.29
PDLIM1P1-201ENST00000604187 LINC00299Q6ZSB3 139 aa7□□□□□ -1.29
PDLIM1P1-201ENST00000604187 ALG5Q9Y673 324 aa7□□□□□ -1.29
PDLIM1P1-201ENST00000604187 SDHAF1A6NFY7 115 aa6.99□□□□□ -1.29
PDLIM1P1-201ENST00000604187 COX7A2LO14548 114 aa6.99□□□□□ -1.29
PDLIM1P1-201ENST00000604187 ANKRD39Q53RE8 183 aa6.99□□□□□ -1.29
PDLIM1P1-201ENST00000604187 CENPWQ5EE01 88 aa6.99□□□□□ -1.29
PDLIM1P1-201ENST00000604187 FAM19A5Q7Z5A7 132 aaPredicted RBP6.99□□□□□ -1.29
PDLIM1P1-201ENST00000604187 TSKUQ8WUA8 353 aa6.99□□□□□ -1.29
PDLIM1P1-201ENST00000604187 SFT2D1Q8WV19 159 aa6.99□□□□□ -1.29
PDLIM1P1-201ENST00000604187 CRCT1Q9UGL9 99 aa6.99□□□□□ -1.29
PDLIM1P1-201ENST00000604187 XKRY2A2RUG3 117 aa6.98□□□□□ -1.29
PDLIM1P1-201ENST00000604187 C19orf71A6NCJ1 209 aa6.98□□□□□ -1.29
PDLIM1P1-201ENST00000604187 IFNA1P01562 189 aa6.98□□□□□ -1.29
PDLIM1P1-201ENST00000604187 TWIST1Q15672 202 aa6.98□□□□□ -1.29
PDLIM1P1-201ENST00000604187 C2orf48Q96LS8 159 aa6.98□□□□□ -1.29
PDLIM1P1-201ENST00000604187 CDC42SE2Q9NRR3 84 aa6.98□□□□□ -1.29
PDLIM1P1-201ENST00000604187 CTRLP40313 264 aa6.97□□□□□ -1.29
PDLIM1P1-201ENST00000604187 MRAP2Q96G30 205 aa6.97□□□□□ -1.29
PDLIM1P1-201ENST00000604187 CARHSP1Q9Y2V2 147 aaKnown RBP6.97□□□□□ -1.29
PDLIM1P1-201ENST00000604187 I3L3M4 83 aa6.96□□□□□ -1.3
PDLIM1P1-201ENST00000604187 PMCHP20382 165 aa6.96□□□□□ -1.3
PDLIM1P1-201ENST00000604187 SPAG11BQ08648 103 aa6.96□□□□□ -1.3
PDLIM1P1-201ENST00000604187 MRPL52Q86TS9 123 aaKnown RBP6.96□□□□□ -1.3
PDLIM1P1-201ENST00000604187 C9orf62Q8N4C0 152 aa6.96□□□□□ -1.3
PDLIM1P1-201ENST00000604187 KCNRGQ8N5I3 272 aa6.96□□□□□ -1.3
PDLIM1P1-201ENST00000604187 FAM213BQ8TBF2 198 aa6.96□□□□□ -1.3
PDLIM1P1-201ENST00000604187 TMEM242Q9NWH2 141 aa6.96□□□□□ -1.3
PDLIM1P1-201ENST00000604187 NDUFA13Q9P0J0 144 aa6.96□□□□□ -1.3
PDLIM1P1-201ENST00000604187 C1orf196B1AJZ1 125 aa6.95□□□□□ -1.3
PDLIM1P1-201ENST00000604187 TSHBP01222 138 aa6.95□□□□□ -1.3
PDLIM1P1-201ENST00000604187 ESDP10768 282 aa6.95□□□□□ -1.3
PDLIM1P1-201ENST00000604187 UBE2BP63146 152 aa6.95□□□□□ -1.3
PDLIM1P1-201ENST00000604187 RNF151Q2KHN1 245 aa6.95□□□□□ -1.3
PDLIM1P1-201ENST00000604187 MBD3L1Q8WWY6 194 aa6.95□□□□□ -1.3
PDLIM1P1-201ENST00000604187 CYTL1Q9NRR1 136 aa6.95□□□□□ -1.3
PDLIM1P1-201ENST00000604187 M0QXV9 152 aa6.94□□□□□ -1.3
PDLIM1P1-201ENST00000604187 GIPP09681 153 aaPredicted RBP6.94□□□□□ -1.3
PDLIM1P1-201ENST00000604187 FOXA3P55318 350 aaPredicted RBP6.94□□□□□ -1.3
PDLIM1P1-201ENST00000604187 C5orf38Q86SI9 138 aa6.94□□□□□ -1.3
PDLIM1P1-201ENST00000604187 C11orf52Q96A22 123 aa6.94□□□□□ -1.3
PDLIM1P1-201ENST00000604187 CNFNQ9BYD5 112 aa6.94□□□□□ -1.3
PDLIM1P1-201ENST00000604187 TRAV13-1A0A0B4J241 112 aa6.93□□□□□ -1.3
PDLIM1P1-201ENST00000604187 RAB19A4D1S5 217 aa6.93□□□□□ -1.3
PDLIM1P1-201ENST00000604187 G3V3Q6 166 aa6.93□□□□□ -1.3
PDLIM1P1-201ENST00000604187 GNG4P50150 75 aa6.93□□□□□ -1.3
PDLIM1P1-201ENST00000604187 RNASE13Q5GAN3 156 aaKnown RBP6.93□□□□□ -1.3
PDLIM1P1-201ENST00000604187 TEX261Q6UWH6 196 aa6.93□□□□□ -1.3
PDLIM1P1-201ENST00000604187 KRTAP7-1Q8IUC3 87 aa6.93□□□□□ -1.3
PDLIM1P1-201ENST00000604187 IMMP2LQ96T52 175 aa6.93□□□□□ -1.3
PDLIM1P1-201ENST00000604187 CDIP1Q9H305 208 aa6.93□□□□□ -1.3
PDLIM1P1-201ENST00000604187 MRPL35Q9NZE8 188 aaKnown RBP6.93□□□□□ -1.3
PDLIM1P1-201ENST00000604187 TRBV6-5A0A0K0K1A5 114 aa6.92□□□□□ -1.3
PDLIM1P1-201ENST00000604187 SMIM15Q7Z3B0 74 aa6.92□□□□□ -1.3
PDLIM1P1-201ENST00000604187 RETNLBQ9BQ08 111 aa6.92□□□□□ -1.3
PDLIM1P1-201ENST00000604187 RNASE7Q9H1E1 156 aaKnown RBP6.92□□□□□ -1.3
PDLIM1P1-201ENST00000604187 RPP21Q9H633 154 aaKnown RBP6.92□□□□□ -1.3
PDLIM1P1-201ENST00000604187 A0A087X002 238 aa6.91□□□□□ -1.3
PDLIM1P1-201ENST00000604187 C7orf77A4D0Y5 90 aa6.91□□□□□ -1.3
PDLIM1P1-201ENST00000604187 ARPC5O15511 151 aa6.91□□□□□ -1.3
PDLIM1P1-201ENST00000604187 GAGE2EQ4V326 116 aa6.91□□□□□ -1.3
PDLIM1P1-201ENST00000604187 C10orf25Q5T742 122 aa6.91□□□□□ -1.3
PDLIM1P1-201ENST00000604187 OR10D4PQ8NGN7 298 aa6.91□□□□□ -1.3
PDLIM1P1-201ENST00000604187 SMIM12Q96EX1 92 aa6.91□□□□□ -1.3
PDLIM1P1-201ENST00000604187 GNG13Q9P2W3 67 aa6.91□□□□□ -1.3
PDLIM1P1-201ENST00000604187 GAGE2DQ9UEU5 116 aa6.91□□□□□ -1.3
PDLIM1P1-201ENST00000604187 TRBV20OR9-2A0A075B6H5 130 aa6.9□□□□□ -1.3
PDLIM1P1-201ENST00000604187 UMAD1C9J7I0 102 aa6.9□□□□□ -1.3
PDLIM1P1-201ENST00000604187 ZNF861PO60384 105 aa6.9□□□□□ -1.3
PDLIM1P1-201ENST00000604187 CCL20P78556 96 aa6.9□□□□□ -1.3
PDLIM1P1-201ENST00000604187 NUDT10Q8NFP7 164 aa6.9□□□□□ -1.3
PDLIM1P1-201ENST00000604187 ORAOV1Q8WV07 137 aa6.9□□□□□ -1.3
PDLIM1P1-201ENST00000604187 NUDT11Q96G61 164 aa6.9□□□□□ -1.3
PDLIM1P1-201ENST00000604187 ST20Q9HBF5 79 aa6.9□□□□□ -1.3
PDLIM1P1-201ENST00000604187 NDUFA1O15239 70 aa6.89□□□□□ -1.31
PDLIM1P1-201ENST00000604187 TYMSOSQ8TAI1 123 aa6.89□□□□□ -1.31
PDLIM1P1-201ENST00000604187 SMDT1Q9H4I9 107 aa6.89□□□□□ -1.31
PDLIM1P1-201ENST00000604187 MANBALQ9NQG1 85 aa6.89□□□□□ -1.31
PDLIM1P1-201ENST00000604187 C6orf48Q9UBA6 75 aa6.89□□□□□ -1.31
PDLIM1P1-201ENST00000604187 TLX1NBP0CAT3 122 aa6.88□□□□□ -1.31
PDLIM1P1-201ENST00000604187 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
PDLIM1P1-201ENST00000604187 UNQ6190/PRO20217Q6UXQ8 127 aa6.88□□□□□ -1.31
PDLIM1P1-201ENST00000604187 Q6ZUT4 128 aa6.88□□□□□ -1.31
PDLIM1P1-201ENST00000604187 FAM210AQ96ND0 272 aa6.88□□□□□ -1.31
PDLIM1P1-201ENST00000604187 BIN3Q9NQY0 253 aa6.88□□□□□ -1.31
PDLIM1P1-201ENST00000604187 TRBV27A0A0K0K1C4 114 aa6.87□□□□□ -1.31
PDLIM1P1-201ENST00000604187 CRYGAP11844 174 aa6.87□□□□□ -1.31
PDLIM1P1-201ENST00000604187 UBE2D4Q9Y2X8 147 aa6.87□□□□□ -1.31
PDLIM1P1-201ENST00000604187 F8WDY8 70 aa6.86□□□□□ -1.31
PDLIM1P1-201ENST00000604187 FCER1GP30273 86 aa6.86□□□□□ -1.31
PDLIM1P1-201ENST00000604187 POLR2KP53803 58 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms