RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 Q8N814 137 aa10.62□□□□□ -0.71
PPFIA3-213ENST00000602905 Q8N8P6 123 aa10.62□□□□□ -0.71
PPFIA3-213ENST00000602905 MRPL18Q9H0U6 180 aaKnown RBP10.62□□□□□ -0.71
PPFIA3-213ENST00000602905 PKD1P98161 4303 aa10.61□□□□□ -0.71
PPFIA3-213ENST00000602905 LECT2O14960 151 aa10.61□□□□□ -0.71
PPFIA3-213ENST00000602905 MAPKAPK5-AS1Q8N8E1 139 aa10.61□□□□□ -0.71
PPFIA3-213ENST00000602905 NTN5Q8WTR8 489 aaPredicted RBP10.61□□□□□ -0.71
PPFIA3-213ENST00000602905 NXT2Q9NPJ8 142 aaKnown RBP10.61□□□□□ -0.71
PPFIA3-213ENST00000602905 CSDC2Q9Y534 153 aaKnown RBP10.61□□□□□ -0.71
PPFIA3-213ENST00000602905 K7EMI3 77 aa10.6□□□□□ -0.71
PPFIA3-213ENST00000602905 ZNF664Q8N3J9 261 aa10.6□□□□□ -0.71
PPFIA3-213ENST00000602905 TIMM21Q9BVV7 248 aa10.6□□□□□ -0.71
PPFIA3-213ENST00000602905 CDC42SE2Q9NRR3 84 aa10.6□□□□□ -0.71
PPFIA3-213ENST00000602905 UBE2D4Q9Y2X8 147 aa10.6□□□□□ -0.71
PPFIA3-213ENST00000602905 TRAPPC1Q9Y5R8 145 aa10.6□□□□□ -0.71
PPFIA3-213ENST00000602905 G0S2P27469 103 aa10.59□□□□□ -0.71
PPFIA3-213ENST00000602905 SS18Q15532 418 aa10.59□□□□□ -0.71
PPFIA3-213ENST00000602905 ORMDL2Q53FV1 153 aa10.59□□□□□ -0.71
PPFIA3-213ENST00000602905 SMCO4Q9NRQ5 59 aa10.59□□□□□ -0.71
PPFIA3-213ENST00000602905 IGLV5-52A0A0A0MRZ9 124 aa10.58□□□□□ -0.72
PPFIA3-213ENST00000602905 PRSS3P2Q8NHM4 247 aa10.58□□□□□ -0.72
PPFIA3-213ENST00000602905 SPANXA1Q9NS26 97 aa10.58□□□□□ -0.72
PPFIA3-213ENST00000602905 IFI27P40305 119 aaPredicted RBP10.57□□□□□ -0.72
PPFIA3-213ENST00000602905 RPL39P62891 51 aaKnown RBP10.57□□□□□ -0.72
PPFIA3-213ENST00000602905 WFDC2Q14508 124 aa10.57□□□□□ -0.72
PPFIA3-213ENST00000602905 ALKBH7Q9BT30 221 aaPredicted RBP10.57□□□□□ -0.72
PPFIA3-213ENST00000602905 BIRC6Q9NR09 4857 aa10.57□□□□□ -0.72
PPFIA3-213ENST00000602905 PKHD1P08F94 4074 aa10.57□□□□□ -0.72
PPFIA3-213ENST00000602905 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.56□□□□□ -0.72
PPFIA3-213ENST00000602905 LINC00959A0A1B0GUT2 108 aa10.56□□□□□ -0.72
PPFIA3-213ENST00000602905 GAGE12HA6NDE8 117 aa10.56□□□□□ -0.72
PPFIA3-213ENST00000602905 USP17L23D6RBM5 183 aa10.56□□□□□ -0.72
PPFIA3-213ENST00000602905 CHCHD10Q8WYQ3 142 aaPredicted RBP10.56□□□□□ -0.72
PPFIA3-213ENST00000602905 CCL25O15444 150 aa10.55□□□□□ -0.72
PPFIA3-213ENST00000602905 FUSP35637 526 aaKnown RBP eCLIP10.55□□□□□ -0.72
PPFIA3-213ENST00000602905 CFAP161Q6P656 301 aa10.55□□□□□ -0.72
PPFIA3-213ENST00000602905 KRTAP26-1Q6PEX3 210 aa10.55□□□□□ -0.72
PPFIA3-213ENST00000602905 CYSLTR1Q9Y271 337 aa10.55□□□□□ -0.72
PPFIA3-213ENST00000602905 DNAH11Q96DT5 4516 aa10.54□□□□□ -0.72
PPFIA3-213ENST00000602905 GCSHP23434 173 aa10.54□□□□□ -0.72
PPFIA3-213ENST00000602905 Q6ZUT4 128 aa10.54□□□□□ -0.72
PPFIA3-213ENST00000602905 C1orf196B1AJZ1 125 aa10.53□□□□□ -0.72
PPFIA3-213ENST00000602905 XCL1P47992 114 aa10.53□□□□□ -0.72
PPFIA3-213ENST00000602905 MRPS36P82909 103 aaKnown RBP10.53□□□□□ -0.72
PPFIA3-213ENST00000602905 RNASE13Q5GAN3 156 aaKnown RBP10.53□□□□□ -0.72
PPFIA3-213ENST00000602905 C2orf66Q6UXQ4 117 aa10.53□□□□□ -0.72
PPFIA3-213ENST00000602905 FA2HQ7L5A8 372 aa10.53□□□□□ -0.72
PPFIA3-213ENST00000602905 CBLN2Q8IUK8 224 aa10.53□□□□□ -0.72
PPFIA3-213ENST00000602905 PYGO1Q9Y3Y4 419 aa10.53□□□□□ -0.72
PPFIA3-213ENST00000602905 TRAV13-1A0A0B4J241 112 aa10.52□□□□□ -0.73
PPFIA3-213ENST00000602905 Q6ZN92 141 aa10.51□□□□□ -0.73
PPFIA3-213ENST00000602905 YPEL4Q96NS1 127 aa10.51□□□□□ -0.73
PPFIA3-213ENST00000602905 AP5S1Q9NUS5 200 aa10.51□□□□□ -0.73
PPFIA3-213ENST00000602905 hDV102S1A0JD36 115 aa10.5□□□□□ -0.73
PPFIA3-213ENST00000602905 LINC01549A6NIU2 74 aa10.5□□□□□ -0.73
PPFIA3-213ENST00000602905 IFITM10A6NMD0 228 aa10.5□□□□□ -0.73
PPFIA3-213ENST00000602905 CD164L2Q6UWJ8 174 aa10.5□□□□□ -0.73
PPFIA3-213ENST00000602905 TMEM141Q96I45 108 aa10.5□□□□□ -0.73
PPFIA3-213ENST00000602905 PRSS1P07477 247 aa10.49□□□□□ -0.73
PPFIA3-213ENST00000602905 NPSP0C0P6 89 aa10.49□□□□□ -0.73
PPFIA3-213ENST00000602905 FOXI1Q12951 378 aa10.49□□□□□ -0.73
PPFIA3-213ENST00000602905 PAPPA-AS1Q5QFB9 102 aa10.49□□□□□ -0.73
PPFIA3-213ENST00000602905 TEX43Q6ZNM6 134 aa10.49□□□□□ -0.73
PPFIA3-213ENST00000602905 OPRPNQ99935 248 aaPredicted RBP10.49□□□□□ -0.73
PPFIA3-213ENST00000602905 C2orf88Q9BSF0 95 aa10.49□□□□□ -0.73
PPFIA3-213ENST00000602905 DYNC1H1Q14204 4646 aaKnown RBP10.48□□□□□ -0.73
PPFIA3-213ENST00000602905 IGLV4-3A0A075B6K6 122 aa10.48□□□□□ -0.73
PPFIA3-213ENST00000602905 RAB5BP61020 215 aa10.48□□□□□ -0.73
PPFIA3-213ENST00000602905 LINC01546A6NGU7 62 aa10.47□□□□□ -0.73
PPFIA3-213ENST00000602905 CDK2AP2O75956 126 aa10.47□□□□□ -0.73
PPFIA3-213ENST00000602905 MALP21145 153 aa10.47□□□□□ -0.73
PPFIA3-213ENST00000602905 C18orf32Q8TCD1 76 aa10.47□□□□□ -0.73
PPFIA3-213ENST00000602905 TOMM6Q96B49 74 aa10.47□□□□□ -0.73
PPFIA3-213ENST00000602905 VCX2Q9H322 139 aa10.47□□□□□ -0.73
PPFIA3-213ENST00000602905 IGHV1-58A0A0C4DH39 117 aa10.46□□□□□ -0.73
PPFIA3-213ENST00000602905 COX7A2LO14548 114 aa10.46□□□□□ -0.73
PPFIA3-213ENST00000602905 KRTAP10-1P60331 282 aa10.46□□□□□ -0.73
PPFIA3-213ENST00000602905 SCGB3A1Q96QR1 104 aa10.46□□□□□ -0.73
PPFIA3-213ENST00000602905 TIMM17AQ99595 171 aa10.46□□□□□ -0.73
PPFIA3-213ENST00000602905 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.45□□□□□ -0.74
PPFIA3-213ENST00000602905 IGIPA6NJ69 53 aa10.45□□□□□ -0.74
PPFIA3-213ENST00000602905 LINC00614P0C842 121 aa10.45□□□□□ -0.74
PPFIA3-213ENST00000602905 FAM104AQ969W3 186 aa10.45□□□□□ -0.74
PPFIA3-213ENST00000602905 APOMO95445 188 aa10.44□□□□□ -0.74
PPFIA3-213ENST00000602905 HIGD2BQ4VC39 106 aa10.44□□□□□ -0.74
PPFIA3-213ENST00000602905 ERASQ7Z444 233 aa10.44□□□□□ -0.74
PPFIA3-213ENST00000602905 C15orf56Q8N910 161 aa10.44□□□□□ -0.74
PPFIA3-213ENST00000602905 DNAH5Q8TE73 4624 aa10.43□□□□□ -0.74
PPFIA3-213ENST00000602905 GVQW2A0A096LPI5 108 aaPredicted RBP10.42□□□□□ -0.74
PPFIA3-213ENST00000602905 ZNF561-AS1K7EIQ3 104 aa10.42□□□□□ -0.74
PPFIA3-213ENST00000602905 CNBPP62633 177 aaKnown RBP10.42□□□□□ -0.74
PPFIA3-213ENST00000602905 C5orf38Q86SI9 138 aa10.42□□□□□ -0.74
PPFIA3-213ENST00000602905 AMELXQ99217 191 aa10.42□□□□□ -0.74
PPFIA3-213ENST00000602905 TRGC2P03986 189 aa10.41□□□□□ -0.74
PPFIA3-213ENST00000602905 SEC11AP67812 179 aa10.41□□□□□ -0.74
PPFIA3-213ENST00000602905 LRP1BQ9NZR2 4599 aa10.4□□□□□ -0.74
PPFIA3-213ENST00000602905 COLCA2A8K830 154 aa10.4□□□□□ -0.74
PPFIA3-213ENST00000602905 HBDP02042 147 aa10.4□□□□□ -0.74
PPFIA3-213ENST00000602905 UBE2D1P51668 147 aa10.4□□□□□ -0.74
PPFIA3-213ENST00000602905 LINC01620Q4KN68 170 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms