RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 TNFRSF6BO95407 300 aa6.42□□□□□ -1.38
HIF3A-219ENST00000600879 NPYP01303 97 aa6.42□□□□□ -1.38
HIF3A-219ENST00000600879 LINC00694P0DN24 101 aa6.42□□□□□ -1.38
HIF3A-219ENST00000600879 UBE2D3P61077 147 aa6.42□□□□□ -1.38
HIF3A-219ENST00000600879 UBE2D2P62837 147 aa6.42□□□□□ -1.38
HIF3A-219ENST00000600879 NRACQ8N912 160 aa6.42□□□□□ -1.38
HIF3A-219ENST00000600879 UBE2WQ96B02 151 aa6.42□□□□□ -1.38
HIF3A-219ENST00000600879 TRBV6-5A0A0K0K1A5 114 aa6.41□□□□□ -1.38
HIF3A-219ENST00000600879 SDHAF1A6NFY7 115 aa6.41□□□□□ -1.38
HIF3A-219ENST00000600879 RAB5AP20339 215 aa6.41□□□□□ -1.38
HIF3A-219ENST00000600879 KRTAP9-2Q9BYQ4 174 aa6.41□□□□□ -1.38
HIF3A-219ENST00000600879 LAMTOR2Q9Y2Q5 125 aa6.41□□□□□ -1.38
HIF3A-219ENST00000600879 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.41□□□□□ -1.38
HIF3A-219ENST00000600879 PANO1I0J062 215 aa6.4□□□□□ -1.38
HIF3A-219ENST00000600879 PHOX2AO14813 284 aa6.4□□□□□ -1.38
HIF3A-219ENST00000600879 PMCHP20382 165 aa6.4□□□□□ -1.38
HIF3A-219ENST00000600879 SUMO2P61956 95 aaKnown RBP6.4□□□□□ -1.38
HIF3A-219ENST00000600879 Q6ZRU5 148 aa6.4□□□□□ -1.38
HIF3A-219ENST00000600879 C20orf78Q9BR46 151 aa6.4□□□□□ -1.38
HIF3A-219ENST00000600879 MAP1LC3AQ9H492 121 aa6.4□□□□□ -1.38
HIF3A-219ENST00000600879 LOC389332A0A1B0GUA5 103 aa6.39□□□□□ -1.39
HIF3A-219ENST00000600879 POLR2KP53803 58 aaKnown RBP6.39□□□□□ -1.39
HIF3A-219ENST00000600879 COTL1Q14019 142 aa6.39□□□□□ -1.39
HIF3A-219ENST00000600879 TMEM97Q5BJF2 176 aa6.39□□□□□ -1.39
HIF3A-219ENST00000600879 NIT1Q86X76 327 aa6.39□□□□□ -1.39
HIF3A-219ENST00000600879 ALKBH7Q9BT30 221 aaPredicted RBP6.39□□□□□ -1.39
HIF3A-219ENST00000600879 I3L3M4 83 aa6.38□□□□□ -1.39
HIF3A-219ENST00000600879 VCYO14598 125 aa6.38□□□□□ -1.39
HIF3A-219ENST00000600879 TRGC2P03986 189 aa6.38□□□□□ -1.39
HIF3A-219ENST00000600879 SMIM2Q9BVW6 85 aa6.38□□□□□ -1.39
HIF3A-219ENST00000600879 A0A087WX48 190 aa6.37□□□□□ -1.39
HIF3A-219ENST00000600879 TRBV6-8A0A0A6YYG3 113 aa6.37□□□□□ -1.39
HIF3A-219ENST00000600879 IGHV1-24A0A0C4DH33 117 aa6.37□□□□□ -1.39
HIF3A-219ENST00000600879 TRBV27A0A0K0K1C4 114 aa6.37□□□□□ -1.39
HIF3A-219ENST00000600879 PRSS47A8MTI9 375 aa6.37□□□□□ -1.39
HIF3A-219ENST00000600879 USP17L23D6RBM5 183 aa6.37□□□□□ -1.39
HIF3A-219ENST00000600879 FCER1GP30273 86 aa6.37□□□□□ -1.39
HIF3A-219ENST00000600879 RPL32P62910 135 aaKnown RBP6.37□□□□□ -1.39
HIF3A-219ENST00000600879 C14orf177Q52M58 125 aa6.37□□□□□ -1.39
HIF3A-219ENST00000600879 KIR2DL4Q99706 377 aa6.37□□□□□ -1.39
HIF3A-219ENST00000600879 TRBV25-1A0A075B6N4 114 aa6.36□□□□□ -1.39
HIF3A-219ENST00000600879 TSHBP01222 138 aa6.36□□□□□ -1.39
HIF3A-219ENST00000600879 PRSS1P07477 247 aa6.36□□□□□ -1.39
HIF3A-219ENST00000600879 AMTP48728 403 aa6.36□□□□□ -1.39
HIF3A-219ENST00000600879 IQCJQ1A5X6 159 aa6.36□□□□□ -1.39
HIF3A-219ENST00000600879 NTM-AS1Q6ZSK4 140 aa6.36□□□□□ -1.39
HIF3A-219ENST00000600879 Q8N8P6 123 aa6.36□□□□□ -1.39
HIF3A-219ENST00000600879 PRSS3P2Q8NHM4 247 aa6.36□□□□□ -1.39
HIF3A-219ENST00000600879 C1orf43Q9BWL3 253 aa6.36□□□□□ -1.39
HIF3A-219ENST00000600879 TCAPO15273 167 aa6.35□□□□□ -1.39
HIF3A-219ENST00000600879 IFI27P40305 119 aaPredicted RBP6.35□□□□□ -1.39
HIF3A-219ENST00000600879 C18orf32Q8TCD1 76 aa6.35□□□□□ -1.39
HIF3A-219ENST00000600879 CHCHD5Q9BSY4 110 aa6.35□□□□□ -1.39
HIF3A-219ENST00000600879 TMEM243Q9BU79 118 aa6.35□□□□□ -1.39
HIF3A-219ENST00000600879 NXT2Q9NPJ8 142 aaKnown RBP6.35□□□□□ -1.39
HIF3A-219ENST00000600879 TMEM262E9PQX1 116 aa6.34□□□□□ -1.39
HIF3A-219ENST00000600879 UBE2L6O14933 153 aa6.34□□□□□ -1.39
HIF3A-219ENST00000600879 GAGE6Q13070 117 aa6.34□□□□□ -1.39
HIF3A-219ENST00000600879 ENHOQ6UWT2 76 aa6.34□□□□□ -1.39
HIF3A-219ENST00000600879 FA2HQ7L5A8 372 aa6.34□□□□□ -1.39
HIF3A-219ENST00000600879 C9orf163Q8N9P6 203 aa6.34□□□□□ -1.39
HIF3A-219ENST00000600879 DPH3Q96FX2 82 aa6.34□□□□□ -1.39
HIF3A-219ENST00000600879 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.33□□□□□ -1.4
HIF3A-219ENST00000600879 IGKV2-29A2NJV5 120 aaPredicted RBP6.33□□□□□ -1.4
HIF3A-219ENST00000600879 C1orf196B1AJZ1 125 aa6.33□□□□□ -1.4
HIF3A-219ENST00000600879 CRPP02741 224 aa6.33□□□□□ -1.4
HIF3A-219ENST00000600879 CHTF8P0CG12 524 aa6.33□□□□□ -1.4
HIF3A-219ENST00000600879 Q0VG73 95 aa6.33□□□□□ -1.4
HIF3A-219ENST00000600879 CHCHD7Q9BUK0 85 aa6.33□□□□□ -1.4
HIF3A-219ENST00000600879 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
HIF3A-219ENST00000600879 K7EMI3 77 aa6.32□□□□□ -1.4
HIF3A-219ENST00000600879 LINC00614P0C842 121 aa6.32□□□□□ -1.4
HIF3A-219ENST00000600879 ESDP10768 282 aa6.32□□□□□ -1.4
HIF3A-219ENST00000600879 RAB5BP61020 215 aa6.32□□□□□ -1.4
HIF3A-219ENST00000600879 PKIAP61925 76 aa6.32□□□□□ -1.4
HIF3A-219ENST00000600879 ORMDL2Q53FV1 153 aa6.32□□□□□ -1.4
HIF3A-219ENST00000600879 CLPSL2Q6UWE3 100 aa6.32□□□□□ -1.4
HIF3A-219ENST00000600879 SDIM1Q6ZPB5 146 aa6.32□□□□□ -1.4
HIF3A-219ENST00000600879 BAGE3Q86Y29 109 aa6.32□□□□□ -1.4
HIF3A-219ENST00000600879 TMEM18Q96B42 140 aa6.32□□□□□ -1.4
HIF3A-219ENST00000600879 LPAP08519 4548 aa6.31□□□□□ -1.4
HIF3A-219ENST00000600879 H7C423 109 aa6.31□□□□□ -1.4
HIF3A-219ENST00000600879 ANGP03950 147 aaKnown RBP6.31□□□□□ -1.4
HIF3A-219ENST00000600879 MPV17L2Q567V2 206 aa6.31□□□□□ -1.4
HIF3A-219ENST00000600879 AMMECR1LQ6DCA0 310 aa6.31□□□□□ -1.4
HIF3A-219ENST00000600879 DGAT2L7PQ6IED9 249 aa6.31□□□□□ -1.4
HIF3A-219ENST00000600879 RNASEKQ6P5S7 137 aaKnown RBP6.31□□□□□ -1.4
HIF3A-219ENST00000600879 C20orf203Q8NBC4 194 aa6.31□□□□□ -1.4
HIF3A-219ENST00000600879 URB1-AS1Q96HZ7 61 aa6.31□□□□□ -1.4
HIF3A-219ENST00000600879 LINC01600Q96MT4 127 aa6.31□□□□□ -1.4
HIF3A-219ENST00000600879 A0A087WYN8 130 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 HIST1H2BKO60814 126 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 HIST1H2BJP06899 126 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 FGF6P10767 208 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 HIST1H2BOP23527 126 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 HIST1H2BBP33778 126 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 HIST1H2BDP58876 126 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 HIST1H2BCP62807 126 aa6.3□□□□□ -1.4
HIF3A-219ENST00000600879 RPL39P62891 51 aaKnown RBP6.3□□□□□ -1.4
HIF3A-219ENST00000600879 HIST2H2BEQ16778 126 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms