RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 FAM104AQ969W3 186 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 ORMDL1Q9P0S3 153 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 PTPRQQ9UMZ3 2332 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 NBASA2RRP1 2371 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 COL27A1Q8IZC6 1860 aaPredicted RBP7.12□□□□□ -1.27
NFKB1-212ENST00000600343 A0A087WZ39 114 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 IBA57-AS1B1ANH7 110 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 H0YGX0 51 aa7.11□□□□□ -1.27
NFKB1-212ENST00000600343 UNQ9165/PRO28630Q6UXU0 137 aa7.11□□□□□ -1.27
NFKB1-212ENST00000600343 CCL17Q92583 94 aa7.11□□□□□ -1.27
NFKB1-212ENST00000600343 IGKV2-29A2NJV5 120 aaPredicted RBP7.1□□□□□ -1.27
NFKB1-212ENST00000600343 C9orf106Q8NAJ2 232 aa7.1□□□□□ -1.27
NFKB1-212ENST00000600343 F6UB75 175 aa7.1□□□□□ -1.27
NFKB1-212ENST00000600343 SMIM11BQ8TCY0 68 aa7.1□□□□□ -1.27
NFKB1-212ENST00000600343 ITLN2Q8WWU7 325 aaPredicted RBP7.1□□□□□ -1.27
NFKB1-212ENST00000600343 RPL36AP83881 106 aaKnown RBP7.09□□□□□ -1.27
NFKB1-212ENST00000600343 RPL36ALQ969Q0 106 aaKnown RBP7.09□□□□□ -1.27
NFKB1-212ENST00000600343 C11orf68Q9H3H3 251 aaKnown RBP7.09□□□□□ -1.27
NFKB1-212ENST00000600343 LINC00337Q8N6G1 96 aa7.09□□□□□ -1.27
NFKB1-212ENST00000600343 C11orf72Q8NBR9 251 aa7.09□□□□□ -1.27
NFKB1-212ENST00000600343 EPOPA6NHQ4 379 aa7.09□□□□□ -1.28
NFKB1-212ENST00000600343 PCNX1Q96RV3 2341 aa7.09□□□□□ -1.28
NFKB1-212ENST00000600343 JMJD7-PLA2G4BH0Y9G9 81 aa7.08□□□□□ -1.28
NFKB1-212ENST00000600343 STHQ8IWL8 128 aa7.08□□□□□ -1.28
NFKB1-212ENST00000600343 KLK9Q9UKQ9 250 aa7.08□□□□□ -1.28
NFKB1-212ENST00000600343 IGHV1OR15-1A0A075B7D0 117 aa7.08□□□□□ -1.28
NFKB1-212ENST00000600343 CLEC19AQ6UXS0 136 aa7.08□□□□□ -1.28
NFKB1-212ENST00000600343 C6orf223Q8N319 242 aa7.08□□□□□ -1.28
NFKB1-212ENST00000600343 MED13LQ71F56 2210 aa7.08□□□□□ -1.28
NFKB1-212ENST00000600343 NPBQ8NG41 125 aa7.07□□□□□ -1.28
NFKB1-212ENST00000600343 TRANK1O15050 2925 aa7.07□□□□□ -1.28
NFKB1-212ENST00000600343 TM2D3Q9BRN9 247 aa7.07□□□□□ -1.28
NFKB1-212ENST00000600343 ZZEF1O43149 2961 aa7.06□□□□□ -1.28
NFKB1-212ENST00000600343 TRBV7-4A0A0J9YYF1 115 aa7.06□□□□□ -1.28
NFKB1-212ENST00000600343 HAMPP81172 84 aa7.06□□□□□ -1.28
NFKB1-212ENST00000600343 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.06□□□□□ -1.28
NFKB1-212ENST00000600343 SPTAN1Q13813 2472 aaKnown RBP7.06□□□□□ -1.28
NFKB1-212ENST00000600343 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.06□□□□□ -1.28
NFKB1-212ENST00000600343 TMEM254Q8TBM7 123 aa7.05□□□□□ -1.28
NFKB1-212ENST00000600343 SND1-IT1Q9HBX3 110 aa7.05□□□□□ -1.28
NFKB1-212ENST00000600343 ABCA4P78363 2273 aa7.05□□□□□ -1.28
NFKB1-212ENST00000600343 IGLV5-39A0A0G2JS06 123 aa7.05□□□□□ -1.28
NFKB1-212ENST00000600343 DYNLRB2Q8TF09 96 aa7.05□□□□□ -1.28
NFKB1-212ENST00000600343 RIF1Q5UIP0 2472 aaKnown RBP7.05□□□□□ -1.28
NFKB1-212ENST00000600343 FUSP35637 526 aaKnown RBP eCLIP7.05□□□□□ -1.28
NFKB1-212ENST00000600343 DEFB123Q8N688 67 aa7.05□□□□□ -1.28
NFKB1-212ENST00000600343 CACNA1BQ00975 2339 aa7.05□□□□□ -1.28
NFKB1-212ENST00000600343 IGKV2-28A0A075B6P5 120 aa7.04□□□□□ -1.28
NFKB1-212ENST00000600343 IGLV5-45A0A087WSX0 123 aa7.04□□□□□ -1.28
NFKB1-212ENST00000600343 PATE3B3GLJ2 98 aa7.04□□□□□ -1.28
NFKB1-212ENST00000600343 IGKV2D-28P01615 120 aa7.04□□□□□ -1.28
NFKB1-212ENST00000600343 COX6A2Q02221 97 aa7.04□□□□□ -1.28
NFKB1-212ENST00000600343 RBM12B-AS1Q9P1G2 102 aa7.04□□□□□ -1.28
NFKB1-212ENST00000600343 LINC01547P58512 204 aaPredicted RBP7.04□□□□□ -1.28
NFKB1-212ENST00000600343 Q6ZTI0 123 aa7.04□□□□□ -1.28
NFKB1-212ENST00000600343 ECSCRQ19T08 205 aa7.04□□□□□ -1.28
NFKB1-212ENST00000600343 KALRNO60229 2985 aa7.03□□□□□ -1.28
NFKB1-212ENST00000600343 Q8N3U1 123 aa7.03□□□□□ -1.28
NFKB1-212ENST00000600343 CCDC140Q96MF4 163 aa7.03□□□□□ -1.28
NFKB1-212ENST00000600343 CREBBPQ92793 2442 aa7.03□□□□□ -1.28
NFKB1-212ENST00000600343 IGKV3-7A0A075B6H7 116 aa7.03□□□□□ -1.28
NFKB1-212ENST00000600343 NREPQ16612 68 aa7.03□□□□□ -1.28
NFKB1-212ENST00000600343 DGAT2L7PQ6IED9 249 aa7.03□□□□□ -1.28
NFKB1-212ENST00000600343 KAAG1Q9UBP8 84 aa7.03□□□□□ -1.28
NFKB1-212ENST00000600343 DSPP15924 2871 aaKnown RBP7.02□□□□□ -1.29
NFKB1-212ENST00000600343 IGHV3-38A0A0C4DH36 116 aa7.02□□□□□ -1.29
NFKB1-212ENST00000600343 RNASE1P07998 156 aaKnown RBP7.02□□□□□ -1.29
NFKB1-212ENST00000600343 DPM3Q9P2X0 92 aa7.02□□□□□ -1.29
NFKB1-212ENST00000600343 IGHV3-73A0A0B4J1V6 119 aa7.02□□□□□ -1.29
NFKB1-212ENST00000600343 IGHV3-16A0A0C4DH30 117 aa7.02□□□□□ -1.29
NFKB1-212ENST00000600343 SMIM1B2RUZ4 78 aa7.02□□□□□ -1.29
NFKB1-212ENST00000600343 CHCHD7Q9BUK0 85 aa7.02□□□□□ -1.29
NFKB1-212ENST00000600343 LINC00467Q9BRT7 94 aa7.01□□□□□ -1.29
NFKB1-212ENST00000600343 Q9UF83 564 aa7.01□□□□□ -1.29
NFKB1-212ENST00000600343 LRCOL1A6NCL2 159 aa7.01□□□□□ -1.29
NFKB1-212ENST00000600343 KLLNB2CW77 178 aa7.01□□□□□ -1.29
NFKB1-212ENST00000600343 PRYO14603 147 aa7.01□□□□□ -1.29
NFKB1-212ENST00000600343 PSPHP1O15172 72 aa7.01□□□□□ -1.29
NFKB1-212ENST00000600343 NOTCH3Q9UM47 2321 aa7.01□□□□□ -1.29
NFKB1-212ENST00000600343 TMEM256-PLSCR3K7ERE1 68 aa7□□□□□ -1.29
NFKB1-212ENST00000600343 PRB1P04280 392 aa7□□□□□ -1.29
NFKB1-212ENST00000600343 ADORA2A-AS1P86434 159 aa7□□□□□ -1.29
NFKB1-212ENST00000600343 C11orf45Q8TAV5 145 aa7□□□□□ -1.29
NFKB1-212ENST00000600343 IGHV7-81A0A0B4J1V7 117 aa6.99□□□□□ -1.29
NFKB1-212ENST00000600343 E7EQL1 145 aa6.99□□□□□ -1.29
NFKB1-212ENST00000600343 Q6ZTC4 211 aa6.99□□□□□ -1.29
NFKB1-212ENST00000600343 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
NFKB1-212ENST00000600343 BBC3Q96PG8 261 aaPredicted RBP6.99□□□□□ -1.29
NFKB1-212ENST00000600343 Q1T7F1 81 aa6.99□□□□□ -1.29
NFKB1-212ENST00000600343 LINC00242Q5T6M2 205 aa6.99□□□□□ -1.29
NFKB1-212ENST00000600343 Q6ZVQ6 151 aa6.99□□□□□ -1.29
NFKB1-212ENST00000600343 ACACAQ13085 2346 aa6.99□□□□□ -1.29
NFKB1-212ENST00000600343 PRRC2CQ9Y520 2896 aaKnown RBP6.99□□□□□ -1.29
NFKB1-212ENST00000600343 ZFHX3Q15911 3703 aa6.99□□□□□ -1.29
NFKB1-212ENST00000600343 Q6ZRP5 223 aa6.98□□□□□ -1.29
NFKB1-212ENST00000600343 PROK1P58294 105 aa6.98□□□□□ -1.29
NFKB1-212ENST00000600343 LINC00158P58513 81 aa6.98□□□□□ -1.29
NFKB1-212ENST00000600343 IGHV3OR16-12A0A075B7B8 117 aa6.98□□□□□ -1.29
NFKB1-212ENST00000600343 TRBV10-1A0A0K0K1A3 114 aa6.98□□□□□ -1.29
NFKB1-212ENST00000600343 ERC2-IT1O76042 136 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms