RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TIMM21Q9BVV7 248 aa9.08□□□□□ -0.96
VRK3-219ENST00000600137 TRAPPC1Q9Y5R8 145 aa9.08□□□□□ -0.96
VRK3-219ENST00000600137 DNAH8Q96JB1 4490 aa9.07□□□□□ -0.96
VRK3-219ENST00000600137 LINC01546A6NGU7 62 aa9.07□□□□□ -0.96
VRK3-219ENST00000600137 AMMECR1LQ6DCA0 310 aa9.07□□□□□ -0.96
VRK3-219ENST00000600137 COX11Q9Y6N1 276 aa9.07□□□□□ -0.96
VRK3-219ENST00000600137 COLCA2A8K830 154 aa9.06□□□□□ -0.96
VRK3-219ENST00000600137 CRPP02741 224 aa9.06□□□□□ -0.96
VRK3-219ENST00000600137 ZNF664Q8N3J9 261 aa9.06□□□□□ -0.96
VRK3-219ENST00000600137 OR5A1Q8NGJ0 315 aa9.06□□□□□ -0.96
VRK3-219ENST00000600137 BAALCQ8WXS3 180 aa9.06□□□□□ -0.96
VRK3-219ENST00000600137 RMI2Q96E14 147 aa9.06□□□□□ -0.96
VRK3-219ENST00000600137 URB1-AS1Q96HZ7 61 aa9.06□□□□□ -0.96
VRK3-219ENST00000600137 C1orf43Q9BWL3 253 aa9.06□□□□□ -0.96
VRK3-219ENST00000600137 NXT2Q9NPJ8 142 aaKnown RBP9.06□□□□□ -0.96
VRK3-219ENST00000600137 IGLV10-54A0A075B6I4 117 aa9.05□□□□□ -0.96
VRK3-219ENST00000600137 TRAV8-4A0A0B4J246 113 aa9.05□□□□□ -0.96
VRK3-219ENST00000600137 K7EMI3 77 aa9.05□□□□□ -0.96
VRK3-219ENST00000600137 PSCAO43653 123 aa9.05□□□□□ -0.96
VRK3-219ENST00000600137 SCO1O75880 301 aa9.05□□□□□ -0.96
VRK3-219ENST00000600137 RAB5AP20339 215 aa9.05□□□□□ -0.96
VRK3-219ENST00000600137 OPRPNQ99935 248 aaPredicted RBP9.05□□□□□ -0.96
VRK3-219ENST00000600137 KIAA1109Q2LD37 5005 aa9.05□□□□□ -0.96
VRK3-219ENST00000600137 FUSP35637 526 aaKnown RBP eCLIP9.04□□□□□ -0.96
VRK3-219ENST00000600137 Q6ZUT4 128 aa9.04□□□□□ -0.96
VRK3-219ENST00000600137 SPATA12Q7Z6I5 190 aa9.04□□□□□ -0.96
VRK3-219ENST00000600137 C18orf32Q8TCD1 76 aa9.04□□□□□ -0.96
VRK3-219ENST00000600137 TMEM18Q96B42 140 aa9.04□□□□□ -0.96
VRK3-219ENST00000600137 TMEM101Q96IK0 257 aa9.04□□□□□ -0.96
VRK3-219ENST00000600137 APOBP04114 4563 aaKnown RBP9.04□□□□□ -0.96
VRK3-219ENST00000600137 LINC00959A0A1B0GUT2 108 aa9.03□□□□□ -0.96
VRK3-219ENST00000600137 LECT2O14960 151 aa9.03□□□□□ -0.96
VRK3-219ENST00000600137 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
VRK3-219ENST00000600137 Q8N814 137 aa9.03□□□□□ -0.96
VRK3-219ENST00000600137 PYGO1Q9Y3Y4 419 aa9.03□□□□□ -0.96
VRK3-219ENST00000600137 IGKV3OR2-268A0A0C4DH90 116 aa9.02□□□□□ -0.97
VRK3-219ENST00000600137 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.97
VRK3-219ENST00000600137 RNASE13Q5GAN3 156 aaKnown RBP9.02□□□□□ -0.97
VRK3-219ENST00000600137 DGAT2L7PQ6IED9 249 aa9.02□□□□□ -0.97
VRK3-219ENST00000600137 C2orf66Q6UXQ4 117 aa9.02□□□□□ -0.97
VRK3-219ENST00000600137 PRSS3P2Q8NHM4 247 aa9.02□□□□□ -0.97
VRK3-219ENST00000600137 SPANXA1Q9NS26 97 aa9.02□□□□□ -0.97
VRK3-219ENST00000600137 IGIPA6NJ69 53 aa9.01□□□□□ -0.97
VRK3-219ENST00000600137 CHCHD10Q8WYQ3 142 aaPredicted RBP9.01□□□□□ -0.97
VRK3-219ENST00000600137 PGPEP1Q9NXJ5 209 aa9.01□□□□□ -0.97
VRK3-219ENST00000600137 RYR1P21817 5038 aa9.01□□□□□ -0.97
VRK3-219ENST00000600137 IGLV4-3A0A075B6K6 122 aa9□□□□□ -0.97
VRK3-219ENST00000600137 A0A096LNJ9 63 aa9□□□□□ -0.97
VRK3-219ENST00000600137 GAGE12HA6NDE8 117 aa9□□□□□ -0.97
VRK3-219ENST00000600137 TRGC2P03986 189 aa9□□□□□ -0.97
VRK3-219ENST00000600137 SMAGPQ0VAQ4 97 aa9□□□□□ -0.97
VRK3-219ENST00000600137 FOXI1Q12951 378 aa9□□□□□ -0.97
VRK3-219ENST00000600137 NTN5Q8WTR8 489 aaPredicted RBP9□□□□□ -0.97
VRK3-219ENST00000600137 USP17L23D6RBM5 183 aa8.99□□□□□ -0.97
VRK3-219ENST00000600137 EREGO14944 169 aa8.99□□□□□ -0.97
VRK3-219ENST00000600137 LINC00173Q6ZV60 143 aa8.99□□□□□ -0.97
VRK3-219ENST00000600137 TOMM6Q96B49 74 aa8.99□□□□□ -0.97
VRK3-219ENST00000600137 CYSLTR1Q9Y271 337 aa8.99□□□□□ -0.97
VRK3-219ENST00000600137 CCL25O15444 150 aa8.98□□□□□ -0.97
VRK3-219ENST00000600137 LINC00614P0C842 121 aa8.98□□□□□ -0.97
VRK3-219ENST00000600137 ZC2HC1BQ5TFG8 222 aa8.98□□□□□ -0.97
VRK3-219ENST00000600137 AMELXQ99217 191 aa8.98□□□□□ -0.97
VRK3-219ENST00000600137 PRSS1P07477 247 aa8.97□□□□□ -0.97
VRK3-219ENST00000600137 C15orf56Q8N910 161 aa8.97□□□□□ -0.97
VRK3-219ENST00000600137 HERC2O95714 4834 aa8.97□□□□□ -0.97
VRK3-219ENST00000600137 TRAV13-1A0A0B4J241 112 aa8.96□□□□□ -0.98
VRK3-219ENST00000600137 C16orf90A8MZG2 172 aa8.96□□□□□ -0.98
VRK3-219ENST00000600137 C1orf196B1AJZ1 125 aa8.96□□□□□ -0.98
VRK3-219ENST00000600137 NPSP0C0P6 89 aa8.96□□□□□ -0.98
VRK3-219ENST00000600137 XCL1P47992 114 aa8.96□□□□□ -0.98
VRK3-219ENST00000600137 SS18Q15532 418 aa8.96□□□□□ -0.98
VRK3-219ENST00000600137 CDPF1Q6NVV7 123 aa8.96□□□□□ -0.98
VRK3-219ENST00000600137 CD164L2Q6UWJ8 174 aa8.96□□□□□ -0.98
VRK3-219ENST00000600137 FA2HQ7L5A8 372 aa8.96□□□□□ -0.98
VRK3-219ENST00000600137 TMEM141Q96I45 108 aa8.96□□□□□ -0.98
VRK3-219ENST00000600137 TIMM17AQ99595 171 aa8.96□□□□□ -0.98
VRK3-219ENST00000600137 ATP6V1G1O75348 118 aa8.95□□□□□ -0.98
VRK3-219ENST00000600137 SLPIP03973 132 aa8.95□□□□□ -0.98
VRK3-219ENST00000600137 G0S2P27469 103 aa8.95□□□□□ -0.98
VRK3-219ENST00000600137 KRTAP10-1P60331 282 aa8.95□□□□□ -0.98
VRK3-219ENST00000600137 ERASQ7Z444 233 aa8.95□□□□□ -0.98
VRK3-219ENST00000600137 AP5S1Q9NUS5 200 aa8.95□□□□□ -0.98
VRK3-219ENST00000600137 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.94□□□□□ -0.98
VRK3-219ENST00000600137 IGHV3OR16-9A0A0B4J2B5 98 aa8.94□□□□□ -0.98
VRK3-219ENST00000600137 LINC00310P59036 64 aa8.94□□□□□ -0.98
VRK3-219ENST00000600137 HSPG2P98160 4391 aa8.94□□□□□ -0.98
VRK3-219ENST00000600137 S100A1P23297 94 aa8.93□□□□□ -0.98
VRK3-219ENST00000600137 UBE2D1P51668 147 aa8.93□□□□□ -0.98
VRK3-219ENST00000600137 COX6A2Q02221 97 aa8.93□□□□□ -0.98
VRK3-219ENST00000600137 PDZD11Q5EBL8 140 aa8.93□□□□□ -0.98
VRK3-219ENST00000600137 LINC00242Q5T6M2 205 aa8.93□□□□□ -0.98
VRK3-219ENST00000600137 FAM19A3Q7Z5A8 133 aa8.93□□□□□ -0.98
VRK3-219ENST00000600137 SCGB3A1Q96QR1 104 aa8.93□□□□□ -0.98
VRK3-219ENST00000600137 IGLV5-52A0A0A0MRZ9 124 aa8.92□□□□□ -0.98
VRK3-219ENST00000600137 IFITM10A6NMD0 228 aa8.92□□□□□ -0.98
VRK3-219ENST00000600137 PMCHL1Q16048 86 aa8.92□□□□□ -0.98
VRK3-219ENST00000600137 C14orf177Q52M58 125 aa8.92□□□□□ -0.98
VRK3-219ENST00000600137 VCX2Q9H322 139 aa8.92□□□□□ -0.98
VRK3-219ENST00000600137 LINC01549A6NIU2 74 aa8.91□□□□□ -0.98
VRK3-219ENST00000600137 NUPR1O60356 82 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms