RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 PPDPFQ9H3Y8 114 aa14□□□□□ -0.17
ARHGEF1-218ENST00000599589 Q8N2B8 174 aa14□□□□□ -0.17
ARHGEF1-218ENST00000599589 DAZ2Q13117 558 aaKnown RBP13.99□□□□□ -0.17
ARHGEF1-218ENST00000599589 C10orf99Q6UWK7 81 aa13.99□□□□□ -0.17
ARHGEF1-218ENST00000599589 DAZ4Q86SG3 579 aaKnown RBP13.99□□□□□ -0.17
ARHGEF1-218ENST00000599589 Q9H8V8 135 aa13.99□□□□□ -0.17
ARHGEF1-218ENST00000599589 DAZ3Q9NR90 486 aaKnown RBP13.99□□□□□ -0.17
ARHGEF1-218ENST00000599589 A0A096LNT2 108 aa13.99□□□□□ -0.17
ARHGEF1-218ENST00000599589 C9orf153Q5TBE3 101 aa13.99□□□□□ -0.17
ARHGEF1-218ENST00000599589 COX6A2Q02221 97 aa13.98□□□□□ -0.17
ARHGEF1-218ENST00000599589 LINC00643Q86TS7 51 aa13.98□□□□□ -0.17
ARHGEF1-218ENST00000599589 J3QLI3 93 aa13.98□□□□□ -0.17
ARHGEF1-218ENST00000599589 ZNF462Q96JM2 2506 aa13.98□□□□□ -0.17
ARHGEF1-218ENST00000599589 C3orf22Q8N5N4 141 aa13.97□□□□□ -0.17
ARHGEF1-218ENST00000599589 SOSTDC1Q6X4U4 206 aa13.97□□□□□ -0.17
ARHGEF1-218ENST00000599589 ZFYVE26Q68DK2 2539 aa13.97□□□□□ -0.17
ARHGEF1-218ENST00000599589 IGLV5-45A0A087WSX0 123 aa13.96□□□□□ -0.17
ARHGEF1-218ENST00000599589 LINC00694P0DN24 101 aa13.96□□□□□ -0.17
ARHGEF1-218ENST00000599589 BAALC-AS2P0C853 105 aa13.95□□□□□ -0.18
ARHGEF1-218ENST00000599589 SYNJ2BPP57105 145 aa13.95□□□□□ -0.18
ARHGEF1-218ENST00000599589 TIRAPP58753 221 aa13.95□□□□□ -0.18
ARHGEF1-218ENST00000599589 DEFB112Q30KQ8 113 aa13.95□□□□□ -0.18
ARHGEF1-218ENST00000599589 CRYBG3Q68DQ2 2970 aa13.95□□□□□ -0.18
ARHGEF1-218ENST00000599589 PSMB8P28062 276 aa13.95□□□□□ -0.18
ARHGEF1-218ENST00000599589 BEAN1Q3B7T3 259 aa13.95□□□□□ -0.18
ARHGEF1-218ENST00000599589 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.94□□□□□ -0.185e-7■■■□□ 15.7
ARHGEF1-218ENST00000599589 NDUFA7O95182 113 aa13.94□□□□□ -0.18
ARHGEF1-218ENST00000599589 C22orf24Q9Y442 160 aa13.94□□□□□ -0.18
ARHGEF1-218ENST00000599589 UTP20O75691 2785 aaKnown RBP13.93□□□□□ -0.18
ARHGEF1-218ENST00000599589 IGHV4-59P01825 116 aa13.93□□□□□ -0.18
ARHGEF1-218ENST00000599589 DGAT2L7PQ6IED9 249 aa13.93□□□□□ -0.18
ARHGEF1-218ENST00000599589 RNF152Q8N8N0 203 aa13.93□□□□□ -0.18
ARHGEF1-218ENST00000599589 MAPK1IP1LQ8NDC0 245 aa13.93□□□□□ -0.18
ARHGEF1-218ENST00000599589 FAM218AQ96MZ4 157 aa13.93□□□□□ -0.18
ARHGEF1-218ENST00000599589 UQCRQO14949 82 aa13.93□□□□□ -0.18
ARHGEF1-218ENST00000599589 IGHV3OR16-12A0A075B7B8 117 aa13.92□□□□□ -0.18
ARHGEF1-218ENST00000599589 TRACP01848 142 aa13.92□□□□□ -0.18
ARHGEF1-218ENST00000599589 SDIM1Q6ZPB5 146 aa13.92□□□□□ -0.18
ARHGEF1-218ENST00000599589 FAM208BQ5VWN6 2430 aa13.92□□□□□ -0.18
ARHGEF1-218ENST00000599589 IGLV5-39A0A0G2JS06 123 aa13.92□□□□□ -0.18
ARHGEF1-218ENST00000599589 CELSR2Q9HCU4 2923 aa13.91□□□□□ -0.18
ARHGEF1-218ENST00000599589 PEMTQ9UBM1 199 aa13.91□□□□□ -0.18
ARHGEF1-218ENST00000599589 LINC00242Q5T6M2 205 aa13.91□□□□□ -0.18
ARHGEF1-218ENST00000599589 KRTAP10-9P60411 292 aa13.9□□□□□ -0.18
ARHGEF1-218ENST00000599589 LINC00526Q96FQ7 95 aa13.9□□□□□ -0.18
ARHGEF1-218ENST00000599589 KLK5Q9Y337 293 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF1-218ENST00000599589 HERVK_113P63121 156 aa13.9□□□□□ -0.18
ARHGEF1-218ENST00000599589 GAGE2AQ6NT46 116 aa13.9□□□□□ -0.18
ARHGEF1-218ENST00000599589 MAP1AP78559 2803 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF1-218ENST00000599589 UBR5O95071 2799 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF1-218ENST00000599589 C5orf38Q86SI9 138 aa13.89□□□□□ -0.19
ARHGEF1-218ENST00000599589 ZNF415Q09FC8 603 aa13.89□□□□□ -0.19
ARHGEF1-218ENST00000599589 PRIMA1Q86XR5 153 aa13.89□□□□□ -0.19
ARHGEF1-218ENST00000599589 SMIM1B2RUZ4 78 aa13.88□□□□□ -0.19
ARHGEF1-218ENST00000599589 IGHV3-53P01767 116 aa13.88□□□□□ -0.19
ARHGEF1-218ENST00000599589 DEFB113Q30KQ7 82 aa13.88□□□□□ -0.19
ARHGEF1-218ENST00000599589 DNAJC30Q96LL9 226 aa13.88□□□□□ -0.19
ARHGEF1-218ENST00000599589 Q9HAA7 133 aa13.88□□□□□ -0.19
ARHGEF1-218ENST00000599589 CSPG4Q6UVK1 2322 aa13.88□□□□□ -0.19
ARHGEF1-218ENST00000599589 RBMY1BA6NDE4 496 aaKnown RBP13.88□□□□□ -0.19
ARHGEF1-218ENST00000599589 RBMY1EA6NEQ0 496 aaKnown RBP13.88□□□□□ -0.19
ARHGEF1-218ENST00000599589 RBMY1DP0C7P1 496 aaKnown RBP13.88□□□□□ -0.19
ARHGEF1-218ENST00000599589 IGHV4-31P0DP07 118 aa13.88□□□□□ -0.19
ARHGEF1-218ENST00000599589 DEFB131AP59861 70 aa13.88□□□□□ -0.19
ARHGEF1-218ENST00000599589 COPS9Q8WXC6 57 aa13.88□□□□□ -0.19
ARHGEF1-218ENST00000599589 LRRK2Q5S007 2527 aa13.87□□□□□ -0.19
ARHGEF1-218ENST00000599589 LOC107984640A0A0U1RRK4 108 aa13.87□□□□□ -0.19
ARHGEF1-218ENST00000599589 CXCL5P42830 114 aa13.87□□□□□ -0.19
ARHGEF1-218ENST00000599589 LRRC75A-AS1Q8N1F1 130 aa13.87□□□□□ -0.19
ARHGEF1-218ENST00000599589 ANKRD17O75179 2603 aaKnown RBP13.87□□□□□ -0.19
ARHGEF1-218ENST00000599589 ATP5G1P05496 136 aa13.87□□□□□ -0.19
ARHGEF1-218ENST00000599589 PIK3CD-AS1Q5SR53 167 aa13.87□□□□□ -0.19
ARHGEF1-218ENST00000599589 FBN2P35556 2912 aa13.87□□□□□ -0.19
ARHGEF1-218ENST00000599589 FSHBP01225 129 aa13.86□□□□□ -0.19
ARHGEF1-218ENST00000599589 TRAV13-1A0A0B4J241 112 aa13.85□□□□□ -0.19
ARHGEF1-218ENST00000599589 TMEM89A2RUT3 159 aa13.85□□□□□ -0.19
ARHGEF1-218ENST00000599589 COX7CP15954 63 aa13.85□□□□□ -0.19
ARHGEF1-218ENST00000599589 USP9YO00507 2555 aaPredicted RBP13.84□□□□□ -0.19
ARHGEF1-218ENST00000599589 INAFM2P0DMQ5 153 aa13.84□□□□□ -0.19
ARHGEF1-218ENST00000599589 HOXD3P31249 432 aaPredicted RBP13.84□□□□□ -0.19
ARHGEF1-218ENST00000599589 FAM222AQ5U5X8 452 aa13.84□□□□□ -0.19
ARHGEF1-218ENST00000599589 Q6YL49 198 aa13.84□□□□□ -0.19
ARHGEF1-218ENST00000599589 CSMD2Q7Z408 3487 aa13.84□□□□□ -0.19
ARHGEF1-218ENST00000599589 MALP21145 153 aa13.83□□□□□ -0.2
ARHGEF1-218ENST00000599589 C2orf48Q96LS8 159 aa13.83□□□□□ -0.2
ARHGEF1-218ENST00000599589 C11orf72Q8NBR9 251 aa13.82□□□□□ -0.2
ARHGEF1-218ENST00000599589 POLQO75417 2590 aa13.82□□□□□ -0.2
ARHGEF1-218ENST00000599589 HIST2H2BCQ6DN03 193 aa13.81□□□□□ -0.2
ARHGEF1-218ENST00000599589 HIST2H2BDQ6DRA6 164 aa13.81□□□□□ -0.2
ARHGEF1-218ENST00000599589 CSDC2Q9Y534 153 aaKnown RBP13.81□□□□□ -0.2
ARHGEF1-218ENST00000599589 Q96MF0 132 aa13.8□□□□□ -0.2
ARHGEF1-218ENST00000599589 PTPN13Q12923 2485 aa13.79□□□□□ -0.2
ARHGEF1-218ENST00000599589 RS1O15537 224 aa13.79□□□□□ -0.2
ARHGEF1-218ENST00000599589 HIST1H4AP62805 103 aaKnown RBP13.79□□□□□ -0.2
ARHGEF1-218ENST00000599589 F5H768 121 aa13.79□□□□□ -0.2
ARHGEF1-218ENST00000599589 FAM19A3Q7Z5A8 133 aa13.79□□□□□ -0.2
ARHGEF1-218ENST00000599589 CREBBPQ92793 2442 aa13.79□□□□□ -0.2
ARHGEF1-218ENST00000599589 C9orf129Q5T035 196 aaKnown RBP13.78□□□□□ -0.2
ARHGEF1-218ENST00000599589 EPG5Q9HCE0 2579 aa13.78□□□□□ -0.2
ARHGEF1-218ENST00000599589 A8MTW9 85 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms