RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 HSBP1O75506 76 aa9.56□□□□□ -0.88
IRF3-223ENST00000599223 SERF1AO75920 110 aa9.56□□□□□ -0.88
IRF3-223ENST00000599223 UBE2D3P61077 147 aa9.56□□□□□ -0.88
IRF3-223ENST00000599223 UBE2D2P62837 147 aa9.56□□□□□ -0.88
IRF3-223ENST00000599223 PDZD11Q5EBL8 140 aa9.56□□□□□ -0.88
IRF3-223ENST00000599223 RNASEKQ6P5S7 137 aaKnown RBP9.56□□□□□ -0.88
IRF3-223ENST00000599223 PRSS3P2Q8NHM4 247 aa9.56□□□□□ -0.88
IRF3-223ENST00000599223 CIRBP-AS1Q8TBR5 109 aa9.56□□□□□ -0.88
IRF3-223ENST00000599223 RMI2Q96E14 147 aa9.56□□□□□ -0.88
IRF3-223ENST00000599223 MAP1LC3AQ9H492 121 aa9.56□□□□□ -0.88
IRF3-223ENST00000599223 COX11Q9Y6N1 276 aa9.56□□□□□ -0.88
IRF3-223ENST00000599223 FA2HQ7L5A8 372 aa9.55□□□□□ -0.88
IRF3-223ENST00000599223 Q8N976 141 aa9.55□□□□□ -0.88
IRF3-223ENST00000599223 CHCHD1Q96BP2 118 aaKnown RBP9.55□□□□□ -0.88
IRF3-223ENST00000599223 RNF185Q96GF1 192 aa9.55□□□□□ -0.88
IRF3-223ENST00000599223 F5H697 171 aa9.54□□□□□ -0.88
IRF3-223ENST00000599223 ESDP10768 282 aa9.54□□□□□ -0.88
IRF3-223ENST00000599223 FABP4P15090 132 aa9.54□□□□□ -0.88
IRF3-223ENST00000599223 IQCJQ1A5X6 159 aa9.54□□□□□ -0.88
IRF3-223ENST00000599223 A0A087WX48 190 aa9.53□□□□□ -0.88
IRF3-223ENST00000599223 TRBV10-1A0A0K0K1A3 114 aa9.53□□□□□ -0.88
IRF3-223ENST00000599223 NCR2O95944 276 aa9.53□□□□□ -0.88
IRF3-223ENST00000599223 LINC00614P0C842 121 aa9.53□□□□□ -0.88
IRF3-223ENST00000599223 PMCHP20382 165 aa9.53□□□□□ -0.88
IRF3-223ENST00000599223 MPV17L2Q567V2 206 aa9.53□□□□□ -0.88
IRF3-223ENST00000599223 ENHOQ6UWT2 76 aa9.53□□□□□ -0.88
IRF3-223ENST00000599223 CHCHD7Q9BUK0 85 aa9.53□□□□□ -0.88
IRF3-223ENST00000599223 TRBV7-3A0A075B6L6 115 aa9.52□□□□□ -0.89
IRF3-223ENST00000599223 SMKR1H3BMG3 65 aa9.52□□□□□ -0.89
IRF3-223ENST00000599223 H7C1H1 209 aa9.52□□□□□ -0.89
IRF3-223ENST00000599223 TNFRSF6BO95407 300 aa9.52□□□□□ -0.89
IRF3-223ENST00000599223 AMTP48728 403 aa9.52□□□□□ -0.89
IRF3-223ENST00000599223 RPL36AP83881 106 aaKnown RBP9.52□□□□□ -0.89
IRF3-223ENST00000599223 ZNF56Q15929 161 aa9.52□□□□□ -0.89
IRF3-223ENST00000599223 UBR4Q5T4S7 5183 aa9.52□□□□□ -0.89
IRF3-223ENST00000599223 RPL36ALQ969Q0 106 aaKnown RBP9.52□□□□□ -0.89
IRF3-223ENST00000599223 PACRGQ96M98 296 aaPredicted RBP9.52□□□□□ -0.89
IRF3-223ENST00000599223 NXT2Q9NPJ8 142 aaKnown RBP9.52□□□□□ -0.89
IRF3-223ENST00000599223 LOC389332A0A1B0GUA5 103 aa9.51□□□□□ -0.89
IRF3-223ENST00000599223 NEXN-AS1Q8NBZ9 246 aa9.51□□□□□ -0.89
IRF3-223ENST00000599223 HIST1H2BLQ99880 126 aa9.51□□□□□ -0.89
IRF3-223ENST00000599223 AP5S1Q9NUS5 200 aa9.51□□□□□ -0.89
IRF3-223ENST00000599223 TRBV6-8A0A0A6YYG3 113 aa9.5□□□□□ -0.89
IRF3-223ENST00000599223 NPYP01303 97 aa9.5□□□□□ -0.89
IRF3-223ENST00000599223 HNRNPA3P51991 378 aaKnown RBP9.5□□□□□ -0.89
IRF3-223ENST00000599223 OR10D4PQ8NGN7 298 aa9.5□□□□□ -0.89
IRF3-223ENST00000599223 C20orf78Q9BR46 151 aa9.5□□□□□ -0.89
IRF3-223ENST00000599223 C1orf43Q9BWL3 253 aa9.5□□□□□ -0.89
IRF3-223ENST00000599223 TRAV26-2A0A0B4J265 109 aa9.49□□□□□ -0.89
IRF3-223ENST00000599223 USP17L23D6RBM5 183 aa9.49□□□□□ -0.89
IRF3-223ENST00000599223 KIF25-AS1Q9Y6Z4 181 aa9.49□□□□□ -0.89
IRF3-223ENST00000599223 TMEM262E9PQX1 116 aa9.48□□□□□ -0.89
IRF3-223ENST00000599223 IFI27P40305 119 aaPredicted RBP9.48□□□□□ -0.89
IRF3-223ENST00000599223 SUMO4Q6EEV6 95 aa9.48□□□□□ -0.89
IRF3-223ENST00000599223 CLPSL2Q6UWE3 100 aa9.48□□□□□ -0.89
IRF3-223ENST00000599223 NTM-AS1Q6ZSK4 140 aa9.48□□□□□ -0.89
IRF3-223ENST00000599223 ST20Q9HBF5 79 aa9.48□□□□□ -0.89
IRF3-223ENST00000599223 NUPR1O60356 82 aa9.47□□□□□ -0.89
IRF3-223ENST00000599223 CRPP02741 224 aa9.47□□□□□ -0.89
IRF3-223ENST00000599223 ANGP03950 147 aaKnown RBP9.47□□□□□ -0.89
IRF3-223ENST00000599223 PRSS1P07477 247 aa9.47□□□□□ -0.89
IRF3-223ENST00000599223 LINC00310P59036 64 aa9.47□□□□□ -0.89
IRF3-223ENST00000599223 SUMO2P61956 95 aaKnown RBP9.47□□□□□ -0.89
IRF3-223ENST00000599223 Q8N8P6 123 aa9.47□□□□□ -0.89
IRF3-223ENST00000599223 NRACQ8N912 160 aa9.47□□□□□ -0.89
IRF3-223ENST00000599223 IFITM10A6NMD0 228 aa9.46□□□□□ -0.9
IRF3-223ENST00000599223 PRSS47A8MTI9 375 aa9.46□□□□□ -0.9
IRF3-223ENST00000599223 PANO1I0J062 215 aa9.46□□□□□ -0.9
IRF3-223ENST00000599223 K7EMI3 77 aa9.46□□□□□ -0.9
IRF3-223ENST00000599223 SMIM6P0DI80 62 aa9.46□□□□□ -0.9
IRF3-223ENST00000599223 G0S2P27469 103 aa9.46□□□□□ -0.9
IRF3-223ENST00000599223 KRTAP26-1Q6PEX3 210 aa9.46□□□□□ -0.9
IRF3-223ENST00000599223 CHCHD5Q9BSY4 110 aa9.46□□□□□ -0.9
IRF3-223ENST00000599223 HSPB8Q9UJY1 196 aa9.46□□□□□ -0.9
IRF3-223ENST00000599223 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.46□□□□□ -0.9
IRF3-223ENST00000599223 TCAPO15273 167 aa9.45□□□□□ -0.9
IRF3-223ENST00000599223 OXTP01178 125 aa9.45□□□□□ -0.9
IRF3-223ENST00000599223 RPL37AP61513 92 aaKnown RBP9.45□□□□□ -0.9
IRF3-223ENST00000599223 C14orf177Q52M58 125 aa9.45□□□□□ -0.9
IRF3-223ENST00000599223 FAM19A2Q8N3H0 131 aa9.45□□□□□ -0.9
IRF3-223ENST00000599223 SMIM2Q9BVW6 85 aa9.45□□□□□ -0.9
IRF3-223ENST00000599223 NIT2Q9NQR4 276 aa9.45□□□□□ -0.9
IRF3-223ENST00000599223 IGHV1-24A0A0C4DH33 117 aa9.44□□□□□ -0.9
IRF3-223ENST00000599223 VCYO14598 125 aa9.44□□□□□ -0.9
IRF3-223ENST00000599223 LEPROTL1O95214 131 aa9.44□□□□□ -0.9
IRF3-223ENST00000599223 HBDP02042 147 aa9.44□□□□□ -0.9
IRF3-223ENST00000599223 RPL32P62910 135 aaKnown RBP9.44□□□□□ -0.9
IRF3-223ENST00000599223 ORMDL2Q53FV1 153 aa9.44□□□□□ -0.9
IRF3-223ENST00000599223 RPL39LQ96EH5 51 aaKnown RBP9.44□□□□□ -0.9
IRF3-223ENST00000599223 KIR2DL4Q99706 377 aa9.44□□□□□ -0.9
IRF3-223ENST00000599223 PRR34Q9NV39 138 aa9.44□□□□□ -0.9
IRF3-223ENST00000599223 TRBV6-5A0A0K0K1A5 114 aa9.43□□□□□ -0.9
IRF3-223ENST00000599223 M0QY20 66 aa9.43□□□□□ -0.9
IRF3-223ENST00000599223 RBX1P62877 108 aa9.43□□□□□ -0.9
IRF3-223ENST00000599223 GAGE6Q13070 117 aa9.43□□□□□ -0.9
IRF3-223ENST00000599223 MIAQ16674 131 aa9.43□□□□□ -0.9
IRF3-223ENST00000599223 SERTAD4-AS1Q5TG53 156 aa9.43□□□□□ -0.9
IRF3-223ENST00000599223 URB1-AS1Q96HZ7 61 aa9.43□□□□□ -0.9
IRF3-223ENST00000599223 LINC01546A6NGU7 62 aa9.42□□□□□ -0.9
IRF3-223ENST00000599223 GAS8-AS1O95177 125 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms