RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 G3V3Q6 166 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 HMGB3O15347 200 aaKnown RBP2.23□□□□□ -2.05
HERC3-213ENST00000598772 OR5AL1P0C617 328 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 TLX1NBP0CAT3 122 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 TAS2R45P59539 299 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 TAS2R30P59541 319 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 UBE2G2P60604 165 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 NCS1P62166 190 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 KHDC3LQ587J8 217 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 RNASE13Q5GAN3 156 aaKnown RBP2.23□□□□□ -2.05
HERC3-213ENST00000598772 RASL11AQ6T310 242 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 CBLN2Q8IUK8 224 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 C15orf40Q8WUR7 153 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 PLEKHB2Q96CS7 222 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 C20orf166-AS1Q96NR2 134 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 HIGD2AQ9BW72 106 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 NPCDR1Q9BY65 106 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 LSM5Q9Y4Y9 91 aaKnown RBP2.23□□□□□ -2.05
HERC3-213ENST00000598772 IGLV9-49A0A0B4J1Y8 123 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 FAM236DA0A1B0GTK5 79 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 SERTM2A0A1B0GWG4 89 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 NDUFC2-KCTD14E9PQ53 114 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 H3BS24 57 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 TMEM127O75204 238 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 SFT2D2O95562 160 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 APCSP02743 223 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 FAM236CP0DP71 79 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 SPRR2DP22532 72 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 S100A11P31949 105 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 CRIP1P50238 77 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 RPL32P62910 135 aaKnown RBP2.22□□□□□ -2.05
HERC3-213ENST00000598772 TMEM128Q5BJH2 165 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 DNLZQ5SXM8 178 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 Q6ZNX1 250 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 MCFD2Q8NI22 146 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 CCDC32Q9BV29 185 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 TPPP3Q9BW30 176 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 NIT2Q9NQR4 276 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 ARL2-SNX15V9GYD0 113 aa2.22□□□□□ -2.05
HERC3-213ENST00000598772 IGKV2-28A0A075B6P5 120 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 ATP5HO75947 161 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 IGKV2D-28P01615 120 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 NPSP0C0P6 89 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 RPL37P61927 97 aaKnown RBP2.21□□□□□ -2.06
HERC3-213ENST00000598772 SUMO1P63165 101 aaKnown RBP2.21□□□□□ -2.06
HERC3-213ENST00000598772 HBG1P69891 147 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 HBG2P69892 147 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 PNRC1Q12796 327 aaPredicted RBP2.21□□□□□ -2.06
HERC3-213ENST00000598772 IL18Q14116 193 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 C2orf82Q6UX34 121 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 Q86TA4 180 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 KRTAP13-1Q8IUC0 172 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 C5orf17Q8NAS9 161 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 OR10D4PQ8NGN7 298 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 AP3S1Q92572 193 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 AP1S3Q96PC3 154 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 SPRR2FQ96RM1 72 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 TIMM17AQ99595 171 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 MED28Q9H204 178 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 VCXQ9H320 206 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 CYTL1Q9NRR1 136 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 TP73-AS1Q9UF72 201 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 EPDR1Q9UM22 224 aa2.21□□□□□ -2.06
HERC3-213ENST00000598772 TRBV20-1A0A075B6N2 111 aa2.2□□□□□ -2.06
HERC3-213ENST00000598772 A0A1W2PPV4 95 aa2.2□□□□□ -2.06
HERC3-213ENST00000598772 ZNF727A8MUV8 499 aa2.2□□□□□ -2.06
HERC3-213ENST00000598772 FAM25EA8MYX2 175 aa2.2□□□□□ -2.06
HERC3-213ENST00000598772 F8WDY8 70 aa2.2□□□□□ -2.06
HERC3-213ENST00000598772 H7C423 109 aa2.2□□□□□ -2.06
HERC3-213ENST00000598772 CTDSP2O14595 271 aa2.2□□□□□ -2.06
HERC3-213ENST00000598772 ZNF25P17030 456 aaPredicted RBP2.2□□□□□ -2.06
HERC3-213ENST00000598772 PMCHP20382 165 aa2.2□□□□□ -2.06
HERC3-213ENST00000598772 MOBPQ13875 183 aa2.2□□□□□ -2.06
HERC3-213ENST00000598772 STX12Q86Y82 276 aa2.2□□□□□ -2.06
HERC3-213ENST00000598772 Q8N9P0 234 aaPredicted RBP2.2□□□□□ -2.06
HERC3-213ENST00000598772 MRPS26Q9BYN8 205 aaKnown RBP2.2□□□□□ -2.06
HERC3-213ENST00000598772 CDC42SE2Q9NRR3 84 aa2.2□□□□□ -2.06
HERC3-213ENST00000598772 RSL24D1Q9UHA3 163 aaKnown RBP2.2□□□□□ -2.06
HERC3-213ENST00000598772 BLOC1S6Q9UL45 172 aa2.2□□□□□ -2.06
HERC3-213ENST00000598772 IGSF23A1L1A6 192 aa2.19□□□□□ -2.06
HERC3-213ENST00000598772 C17orf112F2Z3M2 114 aa2.19□□□□□ -2.06
HERC3-213ENST00000598772 UPK1BO75841 260 aa2.19□□□□□ -2.06
HERC3-213ENST00000598772 SCO1O75880 301 aa2.19□□□□□ -2.06
HERC3-213ENST00000598772 SULT1A1P50225 295 aa2.19□□□□□ -2.06
HERC3-213ENST00000598772 FOXA3P55318 350 aaPredicted RBP2.19□□□□□ -2.06
HERC3-213ENST00000598772 ATP6V1FQ16864 119 aa2.19□□□□□ -2.06
HERC3-213ENST00000598772 MZT2AQ6P582 158 aa2.19□□□□□ -2.06
HERC3-213ENST00000598772 NKAPP1Q8N9T2 125 aa2.19□□□□□ -2.06
HERC3-213ENST00000598772 CNBD2Q96M20 576 aa2.19□□□□□ -2.06
HERC3-213ENST00000598772 SPRR4Q96PI1 79 aa2.19□□□□□ -2.06
HERC3-213ENST00000598772 TMEM238C9JI98 176 aa2.18□□□□□ -2.06
HERC3-213ENST00000598772 ARL14EPLP0DKL9 152 aa2.18□□□□□ -2.06
HERC3-213ENST00000598772 PVALBP20472 110 aaPredicted RBP2.18□□□□□ -2.06
HERC3-213ENST00000598772 HRCT1Q6UXD1 115 aa2.18□□□□□ -2.06
HERC3-213ENST00000598772 GNB1LQ9BYB4 327 aa2.18□□□□□ -2.06
HERC3-213ENST00000598772 KCNIP2Q9NS61 270 aa2.18□□□□□ -2.06
HERC3-213ENST00000598772 CHTOPQ9Y3Y2 248 aaKnown RBP2.18□□□□□ -2.06
HERC3-213ENST00000598772 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
HERC3-213ENST00000598772 TRBV30A0A0K0K1B3 111 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms