RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 TRAV8-4A0A0B4J246 113 aa13.03□□□□□ -0.32
SHKBP1-214ENST00000597396 PRSS47A8MTI9 375 aa13.03□□□□□ -0.32
SHKBP1-214ENST00000597396 LECT2O14960 151 aa13.03□□□□□ -0.32
SHKBP1-214ENST00000597396 MRPL18Q9H0U6 180 aaKnown RBP13.03□□□□□ -0.32
SHKBP1-214ENST00000597396 FABP9Q0Z7S8 132 aa13.02□□□□□ -0.33
SHKBP1-214ENST00000597396 Q8N8P6 123 aa13.02□□□□□ -0.33
SHKBP1-214ENST00000597396 WFDC2Q14508 124 aa13.01□□□□□ -0.33
SHKBP1-214ENST00000597396 Q8N814 137 aa13.01□□□□□ -0.33
SHKBP1-214ENST00000597396 PGPEP1Q9NXJ5 209 aa13.01□□□□□ -0.33
SHKBP1-214ENST00000597396 UBE2D4Q9Y2X8 147 aa13.01□□□□□ -0.33
SHKBP1-214ENST00000597396 PKHD1P08F94 4074 aa13.01□□□□□ -0.33
SHKBP1-214ENST00000597396 DNAH11Q96DT5 4516 aa13.01□□□□□ -0.33
SHKBP1-214ENST00000597396 FUSP35637 526 aaKnown RBP eCLIP13□□□□□ -0.33
SHKBP1-214ENST00000597396 RPL39P62891 51 aaKnown RBP13□□□□□ -0.33
SHKBP1-214ENST00000597396 NXT2Q9NPJ8 142 aaKnown RBP13□□□□□ -0.33
SHKBP1-214ENST00000597396 CDPF1Q6NVV7 123 aa12.99□□□□□ -0.33
SHKBP1-214ENST00000597396 ZNF664Q8N3J9 261 aa12.99□□□□□ -0.33
SHKBP1-214ENST00000597396 TIMM21Q9BVV7 248 aa12.99□□□□□ -0.33
SHKBP1-214ENST00000597396 CDC42SE2Q9NRR3 84 aa12.99□□□□□ -0.33
SHKBP1-214ENST00000597396 CSDC2Q9Y534 153 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-214ENST00000597396 TRAPPC1Q9Y5R8 145 aa12.99□□□□□ -0.33
SHKBP1-214ENST00000597396 KRTAP26-1Q6PEX3 210 aa12.98□□□□□ -0.33
SHKBP1-214ENST00000597396 SMCO4Q9NRQ5 59 aa12.98□□□□□ -0.33
SHKBP1-214ENST00000597396 IFI27P40305 119 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-214ENST00000597396 NTN5Q8WTR8 489 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-214ENST00000597396 ALKBH7Q9BT30 221 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-214ENST00000597396 IGLV5-52A0A0A0MRZ9 124 aa12.96□□□□□ -0.33
SHKBP1-214ENST00000597396 K7EMI3 77 aa12.96□□□□□ -0.33
SHKBP1-214ENST00000597396 C14orf177Q52M58 125 aa12.96□□□□□ -0.33
SHKBP1-214ENST00000597396 ORMDL2Q53FV1 153 aa12.96□□□□□ -0.33
SHKBP1-214ENST00000597396 CBLN2Q8IUK8 224 aa12.96□□□□□ -0.33
SHKBP1-214ENST00000597396 SPANXA1Q9NS26 97 aa12.96□□□□□ -0.33
SHKBP1-214ENST00000597396 DYNC1H1Q14204 4646 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-214ENST00000597396 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-214ENST00000597396 GAGE12HA6NDE8 117 aa12.95□□□□□ -0.34
SHKBP1-214ENST00000597396 RNASE13Q5GAN3 156 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-214ENST00000597396 Q6ZUT4 128 aa12.95□□□□□ -0.34
SHKBP1-214ENST00000597396 PRSS3P2Q8NHM4 247 aa12.95□□□□□ -0.34
SHKBP1-214ENST00000597396 CHCHD10Q8WYQ3 142 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-214ENST00000597396 PCLOQ9Y6V0 5065 aa12.94□□□□□ -0.34
SHKBP1-214ENST00000597396 LINC00959A0A1B0GUT2 108 aa12.94□□□□□ -0.34
SHKBP1-214ENST00000597396 USP17L23D6RBM5 183 aa12.94□□□□□ -0.34
SHKBP1-214ENST00000597396 SS18Q15532 418 aa12.94□□□□□ -0.34
SHKBP1-214ENST00000597396 YPEL4Q96NS1 127 aa12.94□□□□□ -0.34
SHKBP1-214ENST00000597396 CYSLTR1Q9Y271 337 aa12.93□□□□□ -0.34
SHKBP1-214ENST00000597396 C2orf66Q6UXQ4 117 aa12.92□□□□□ -0.34
SHKBP1-214ENST00000597396 CCL25O15444 150 aa12.91□□□□□ -0.34
SHKBP1-214ENST00000597396 G0S2P27469 103 aa12.91□□□□□ -0.34
SHKBP1-214ENST00000597396 XCL1P47992 114 aa12.91□□□□□ -0.34
SHKBP1-214ENST00000597396 MRPS36P82909 103 aaKnown RBP12.91□□□□□ -0.34
SHKBP1-214ENST00000597396 TRAV13-1A0A0B4J241 112 aa12.9□□□□□ -0.34
SHKBP1-214ENST00000597396 GCSHP23434 173 aa12.9□□□□□ -0.34
SHKBP1-214ENST00000597396 FA2HQ7L5A8 372 aa12.9□□□□□ -0.34
SHKBP1-214ENST00000597396 OPRPNQ99935 248 aaPredicted RBP12.9□□□□□ -0.34
SHKBP1-214ENST00000597396 PYGO1Q9Y3Y4 419 aa12.9□□□□□ -0.34
SHKBP1-214ENST00000597396 C1orf196B1AJZ1 125 aa12.88□□□□□ -0.35
SHKBP1-214ENST00000597396 FOXI1Q12951 378 aa12.87□□□□□ -0.35
SHKBP1-214ENST00000597396 CFAP161Q6P656 301 aa12.87□□□□□ -0.35
SHKBP1-214ENST00000597396 C18orf32Q8TCD1 76 aa12.87□□□□□ -0.35
SHKBP1-214ENST00000597396 FAM104AQ969W3 186 aa12.87□□□□□ -0.35
SHKBP1-214ENST00000597396 TMEM141Q96I45 108 aa12.87□□□□□ -0.35
SHKBP1-214ENST00000597396 IGLV4-3A0A075B6K6 122 aa12.86□□□□□ -0.35
SHKBP1-214ENST00000597396 IFITM10A6NMD0 228 aa12.86□□□□□ -0.35
SHKBP1-214ENST00000597396 PRSS1P07477 247 aa12.86□□□□□ -0.35
SHKBP1-214ENST00000597396 CD164L2Q6UWJ8 174 aa12.86□□□□□ -0.35
SHKBP1-214ENST00000597396 DNAH5Q8TE73 4624 aa12.85□□□□□ -0.35
SHKBP1-214ENST00000597396 hDV102S1A0JD36 115 aa12.85□□□□□ -0.35
SHKBP1-214ENST00000597396 KRTAP10-1P60331 282 aa12.85□□□□□ -0.35
SHKBP1-214ENST00000597396 Q6ZN92 141 aa12.85□□□□□ -0.35
SHKBP1-214ENST00000597396 LINC01546A6NGU7 62 aa12.84□□□□□ -0.35
SHKBP1-214ENST00000597396 TEX43Q6ZNM6 134 aa12.84□□□□□ -0.35
SHKBP1-214ENST00000597396 TOMM6Q96B49 74 aa12.84□□□□□ -0.35
SHKBP1-214ENST00000597396 AP5S1Q9NUS5 200 aa12.84□□□□□ -0.35
SHKBP1-214ENST00000597396 C15orf56Q8N910 161 aa12.83□□□□□ -0.36
SHKBP1-214ENST00000597396 LINC01549A6NIU2 74 aa12.82□□□□□ -0.36
SHKBP1-214ENST00000597396 IGIPA6NJ69 53 aa12.82□□□□□ -0.36
SHKBP1-214ENST00000597396 NPSP0C0P6 89 aa12.82□□□□□ -0.36
SHKBP1-214ENST00000597396 SCGB3A1Q96QR1 104 aa12.82□□□□□ -0.36
SHKBP1-214ENST00000597396 C2orf88Q9BSF0 95 aa12.82□□□□□ -0.36
SHKBP1-214ENST00000597396 RYR1P21817 5038 aa12.81□□□□□ -0.36
SHKBP1-214ENST00000597396 IGHV1-58A0A0C4DH39 117 aa12.81□□□□□ -0.36
SHKBP1-214ENST00000597396 COX7A2LO14548 114 aa12.81□□□□□ -0.36
SHKBP1-214ENST00000597396 LINC00614P0C842 121 aa12.81□□□□□ -0.36
SHKBP1-214ENST00000597396 MALP21145 153 aa12.81□□□□□ -0.36
SHKBP1-214ENST00000597396 RAB5BP61020 215 aa12.81□□□□□ -0.36
SHKBP1-214ENST00000597396 HIGD2BQ4VC39 106 aa12.81□□□□□ -0.36
SHKBP1-214ENST00000597396 PAPPA-AS1Q5QFB9 102 aa12.81□□□□□ -0.36
SHKBP1-214ENST00000597396 TIMM17AQ99595 171 aa12.81□□□□□ -0.36
SHKBP1-214ENST00000597396 KRTAP4-5Q9BYR2 181 aa12.81□□□□□ -0.36
SHKBP1-214ENST00000597396 VCX2Q9H322 139 aa12.81□□□□□ -0.36
SHKBP1-214ENST00000597396 LRP1BQ9NZR2 4599 aa12.81□□□□□ -0.36
SHKBP1-214ENST00000597396 CDK2AP2O75956 126 aa12.8□□□□□ -0.36
SHKBP1-214ENST00000597396 LINC01620Q4KN68 170 aa12.8□□□□□ -0.36
SHKBP1-214ENST00000597396 SCO1O75880 301 aa12.79□□□□□ -0.36
SHKBP1-214ENST00000597396 TRGC2P03986 189 aa12.79□□□□□ -0.36
SHKBP1-214ENST00000597396 ZC2HC1BQ5TFG8 222 aa12.79□□□□□ -0.36
SHKBP1-214ENST00000597396 ERASQ7Z444 233 aa12.79□□□□□ -0.36
SHKBP1-214ENST00000597396 C5orf38Q86SI9 138 aa12.79□□□□□ -0.36
SHKBP1-214ENST00000597396 GVQW2A0A096LPI5 108 aaPredicted RBP12.78□□□□□ -0.36
SHKBP1-214ENST00000597396 COLCA2A8K830 154 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms