RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ESDP10768 282 aa8.26□□□□□ -1.09
SHKBP1-213ENST00000597325 LINC00310P59036 64 aa8.26□□□□□ -1.09
SHKBP1-213ENST00000597325 PMCHL1Q16048 86 aa8.26□□□□□ -1.09
SHKBP1-213ENST00000597325 AMMECR1LQ6DCA0 310 aa8.26□□□□□ -1.09
SHKBP1-213ENST00000597325 C20orf203Q8NBC4 194 aa8.26□□□□□ -1.09
SHKBP1-213ENST00000597325 MRPS16Q9Y3D3 137 aaKnown RBP8.26□□□□□ -1.09
SHKBP1-213ENST00000597325 GAGE6Q13070 117 aa8.25□□□□□ -1.09
SHKBP1-213ENST00000597325 C2orf66Q6UXQ4 117 aa8.25□□□□□ -1.09
SHKBP1-213ENST00000597325 A0A087WX48 190 aa8.24□□□□□ -1.09
SHKBP1-213ENST00000597325 TMEM262E9PQX1 116 aa8.24□□□□□ -1.09
SHKBP1-213ENST00000597325 S100A2P29034 98 aa8.24□□□□□ -1.09
SHKBP1-213ENST00000597325 RPL39P62891 51 aaKnown RBP8.24□□□□□ -1.09
SHKBP1-213ENST00000597325 PDZD11Q5EBL8 140 aa8.24□□□□□ -1.09
SHKBP1-213ENST00000597325 FAM19A2Q8N3H0 131 aa8.24□□□□□ -1.09
SHKBP1-213ENST00000597325 TOMM6Q96B49 74 aa8.24□□□□□ -1.09
SHKBP1-213ENST00000597325 TMEM101Q96IK0 257 aa8.24□□□□□ -1.09
SHKBP1-213ENST00000597325 SPANXA1Q9NS26 97 aa8.24□□□□□ -1.09
SHKBP1-213ENST00000597325 LINC00588Q9Y4M8 146 aa8.24□□□□□ -1.09
SHKBP1-213ENST00000597325 NUPR1O60356 82 aa8.23□□□□□ -1.09
SHKBP1-213ENST00000597325 FGF6P10767 208 aa8.23□□□□□ -1.09
SHKBP1-213ENST00000597325 ZNF25P17030 456 aaPredicted RBP8.23□□□□□ -1.09
SHKBP1-213ENST00000597325 DGAT2L7PQ6IED9 249 aa8.23□□□□□ -1.09
SHKBP1-213ENST00000597325 SCGB3A1Q96QR1 104 aa8.23□□□□□ -1.09
SHKBP1-213ENST00000597325 SNRPEP62304 92 aaKnown RBP8.22□□□□□ -1.09
SHKBP1-213ENST00000597325 MRPL52Q86TS9 123 aaKnown RBP8.22□□□□□ -1.09
SHKBP1-213ENST00000597325 WFDC10BQ8IUB3 73 aa8.22□□□□□ -1.09
SHKBP1-213ENST00000597325 OR5A1Q8NGJ0 315 aa8.22□□□□□ -1.09
SHKBP1-213ENST00000597325 UPK3BQ9BT76 320 aa8.22□□□□□ -1.09
SHKBP1-213ENST00000597325 TIMM21Q9BVV7 248 aa8.22□□□□□ -1.09
SHKBP1-213ENST00000597325 HSPB8Q9UJY1 196 aa8.22□□□□□ -1.09
SHKBP1-213ENST00000597325 UBE2D4Q9Y2X8 147 aa8.22□□□□□ -1.09
SHKBP1-213ENST00000597325 A0A096LNJ9 63 aa8.21□□□□□ -1.1
SHKBP1-213ENST00000597325 SIVA1O15304 175 aa8.21□□□□□ -1.1
SHKBP1-213ENST00000597325 ATP5LO75964 103 aa8.21□□□□□ -1.1
SHKBP1-213ENST00000597325 LEPROTL1O95214 131 aa8.21□□□□□ -1.1
SHKBP1-213ENST00000597325 Q6ZN92 141 aa8.21□□□□□ -1.1
SHKBP1-213ENST00000597325 ERASQ7Z444 233 aa8.21□□□□□ -1.1
SHKBP1-213ENST00000597325 HIST3H2BBQ8N257 126 aa8.21□□□□□ -1.1
SHKBP1-213ENST00000597325 TMEM141Q96I45 108 aa8.21□□□□□ -1.1
SHKBP1-213ENST00000597325 C5orf52A6NGY3 159 aa8.2□□□□□ -1.1
SHKBP1-213ENST00000597325 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.2□□□□□ -1.1
SHKBP1-213ENST00000597325 FABP4P15090 132 aa8.2□□□□□ -1.1
SHKBP1-213ENST00000597325 RBX1P62877 108 aa8.2□□□□□ -1.1
SHKBP1-213ENST00000597325 MPV17L2Q567V2 206 aa8.2□□□□□ -1.1
SHKBP1-213ENST00000597325 PAPPA-AS1Q5QFB9 102 aa8.2□□□□□ -1.1
SHKBP1-213ENST00000597325 TIMM17AQ99595 171 aa8.2□□□□□ -1.1
SHKBP1-213ENST00000597325 PYGO1Q9Y3Y4 419 aa8.2□□□□□ -1.1
SHKBP1-213ENST00000597325 CSDC2Q9Y534 153 aaKnown RBP8.2□□□□□ -1.1
SHKBP1-213ENST00000597325 A0A1B0GUV1 79 aa8.19□□□□□ -1.1
SHKBP1-213ENST00000597325 C16orf90A8MZG2 172 aa8.19□□□□□ -1.1
SHKBP1-213ENST00000597325 IGHV3-30P01768 117 aa8.19□□□□□ -1.1
SHKBP1-213ENST00000597325 IGHV3-33P01772 117 aa8.19□□□□□ -1.1
SHKBP1-213ENST00000597325 ANGP03950 147 aaKnown RBP8.19□□□□□ -1.1
SHKBP1-213ENST00000597325 NPSP0C0P6 89 aa8.19□□□□□ -1.1
SHKBP1-213ENST00000597325 IGHV3-30-3P0DP02 117 aa8.19□□□□□ -1.1
SHKBP1-213ENST00000597325 IGHV3-30-5P0DP03 117 aa8.19□□□□□ -1.1
SHKBP1-213ENST00000597325 LINC01556Q5JQF7 62 aa8.19□□□□□ -1.1
SHKBP1-213ENST00000597325 PACRGQ96M98 296 aaPredicted RBP8.19□□□□□ -1.1
SHKBP1-213ENST00000597325 IGLV4-3A0A075B6K6 122 aa8.18□□□□□ -1.1
SHKBP1-213ENST00000597325 IGIPA6NJ69 53 aa8.18□□□□□ -1.1
SHKBP1-213ENST00000597325 DNAH10OSP0CZ25 163 aa8.18□□□□□ -1.1
SHKBP1-213ENST00000597325 MRPS36P82909 103 aaKnown RBP8.18□□□□□ -1.1
SHKBP1-213ENST00000597325 Q6ZUT4 128 aa8.18□□□□□ -1.1
SHKBP1-213ENST00000597325 Q8N976 141 aa8.18□□□□□ -1.1
SHKBP1-213ENST00000597325 IFI27L1Q96BM0 104 aa8.18□□□□□ -1.1
SHKBP1-213ENST00000597325 Q9H8V8 135 aa8.18□□□□□ -1.1
SHKBP1-213ENST00000597325 FLG2Q5D862 2391 aaPredicted RBP8.18□□□□□ -1.1
SHKBP1-213ENST00000597325 IGLV4-60A0A075B6I1 120 aa8.17□□□□□ -1.1
SHKBP1-213ENST00000597325 TRAV9-2A0A087WT02 112 aa8.17□□□□□ -1.1
SHKBP1-213ENST00000597325 M0R2N4 97 aa8.17□□□□□ -1.1
SHKBP1-213ENST00000597325 CRPP02741 224 aa8.17□□□□□ -1.1
SHKBP1-213ENST00000597325 INAFM2P0DMQ5 153 aa8.17□□□□□ -1.1
SHKBP1-213ENST00000597325 TEX43Q6ZNM6 134 aa8.17□□□□□ -1.1
SHKBP1-213ENST00000597325 ZNF664Q8N3J9 261 aa8.17□□□□□ -1.1
SHKBP1-213ENST00000597325 Q8N3U1 123 aa8.17□□□□□ -1.1
SHKBP1-213ENST00000597325 HIST1H2BLQ99880 126 aa8.17□□□□□ -1.1
SHKBP1-213ENST00000597325 C2orf88Q9BSF0 95 aa8.17□□□□□ -1.1
SHKBP1-213ENST00000597325 MAP1LC3CQ9BXW4 147 aa8.17□□□□□ -1.1
SHKBP1-213ENST00000597325 PRSS1P07477 247 aa8.16□□□□□ -1.1
SHKBP1-213ENST00000597325 RNASE13Q5GAN3 156 aaKnown RBP8.16□□□□□ -1.1
SHKBP1-213ENST00000597325 C10orf126Q8N4M7 172 aa8.16□□□□□ -1.1
SHKBP1-213ENST00000597325 OPRPNQ99935 248 aaPredicted RBP8.16□□□□□ -1.1
SHKBP1-213ENST00000597325 VCX2Q9H322 139 aa8.16□□□□□ -1.1
SHKBP1-213ENST00000597325 CDC42SE2Q9NRR3 84 aa8.16□□□□□ -1.1
SHKBP1-213ENST00000597325 KLK12Q9UKR0 248 aa8.16□□□□□ -1.1
SHKBP1-213ENST00000597325 IFITM10A6NMD0 228 aa8.15□□□□□ -1.1
SHKBP1-213ENST00000597325 H0Y8G0 127 aa8.15□□□□□ -1.1
SHKBP1-213ENST00000597325 K7EP13 123 aa8.15□□□□□ -1.1
SHKBP1-213ENST00000597325 TTC32Q5I0X7 151 aa8.15□□□□□ -1.1
SHKBP1-213ENST00000597325 CLPSL2Q6UWE3 100 aa8.15□□□□□ -1.1
SHKBP1-213ENST00000597325 LINC00173Q6ZV60 143 aa8.15□□□□□ -1.1
SHKBP1-213ENST00000597325 LINC00269Q8N2A0 174 aa8.15□□□□□ -1.1
SHKBP1-213ENST00000597325 BAALCQ8WXS3 180 aa8.15□□□□□ -1.1
SHKBP1-213ENST00000597325 IGKV3OR2-268A0A0C4DH90 116 aa8.14□□□□□ -1.11
SHKBP1-213ENST00000597325 KRTDAPP60985 99 aa8.14□□□□□ -1.11
SHKBP1-213ENST00000597325 PMVKQ15126 192 aa8.14□□□□□ -1.11
SHKBP1-213ENST00000597325 RNF213Q63HN8 5207 aa8.14□□□□□ -1.11
SHKBP1-213ENST00000597325 EPM2AB3EWF7 344 aa8.13□□□□□ -1.11
SHKBP1-213ENST00000597325 REG3AQ06141 175 aa8.13□□□□□ -1.11
SHKBP1-213ENST00000597325 Q6ZR54 194 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms