RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 COX19Q49B96 90 aa11.91□□□□□ -0.5
IRF3-216ENST00000597180 TMEM18Q96B42 140 aa11.91□□□□□ -0.5
IRF3-216ENST00000597180 MAP1LC3AQ9H492 121 aa11.91□□□□□ -0.5
IRF3-216ENST00000597180 CDC42SE2Q9NRR3 84 aa11.91□□□□□ -0.5
IRF3-216ENST00000597180 UBE2D4Q9Y2X8 147 aa11.91□□□□□ -0.5
IRF3-216ENST00000597180 DNAH5Q8TE73 4624 aa11.91□□□□□ -0.5
IRF3-216ENST00000597180 IGLV5-52A0A0A0MRZ9 124 aa11.9□□□□□ -0.5
IRF3-216ENST00000597180 TIMM21Q9BVV7 248 aa11.9□□□□□ -0.5
IRF3-216ENST00000597180 ZNF664Q8N3J9 261 aa11.89□□□□□ -0.51
IRF3-216ENST00000597180 LRP1BQ9NZR2 4599 aa11.88□□□□□ -0.51
IRF3-216ENST00000597180 IGKV3OR2-268A0A0C4DH90 116 aa11.88□□□□□ -0.51
IRF3-216ENST00000597180 USP17L23D6RBM5 183 aa11.88□□□□□ -0.51
IRF3-216ENST00000597180 C14orf177Q52M58 125 aa11.88□□□□□ -0.51
IRF3-216ENST00000597180 Q8N8P6 123 aa11.88□□□□□ -0.51
IRF3-216ENST00000597180 LOC389332A0A1B0GUA5 103 aa11.87□□□□□ -0.51
IRF3-216ENST00000597180 CDK2AP2O75956 126 aa11.87□□□□□ -0.51
IRF3-216ENST00000597180 MT-ND6P03923 174 aa11.87□□□□□ -0.51
IRF3-216ENST00000597180 RAB5AP20339 215 aa11.87□□□□□ -0.51
IRF3-216ENST00000597180 GCSHP23434 173 aa11.87□□□□□ -0.51
IRF3-216ENST00000597180 KIAA1644Q3SXP7 199 aa11.87□□□□□ -0.51
IRF3-216ENST00000597180 DGAT2L7PQ6IED9 249 aa11.87□□□□□ -0.51
IRF3-216ENST00000597180 SLC7A5P1Q8MH63 180 aa11.87□□□□□ -0.51
IRF3-216ENST00000597180 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.86□□□□□ -0.51
IRF3-216ENST00000597180 KRTAP10-1P60331 282 aa11.86□□□□□ -0.51
IRF3-216ENST00000597180 RPL39P62891 51 aaKnown RBP11.86□□□□□ -0.51
IRF3-216ENST00000597180 CHCHD10Q8WYQ3 142 aaPredicted RBP11.86□□□□□ -0.51
IRF3-216ENST00000597180 LINC00959A0A1B0GUT2 108 aa11.85□□□□□ -0.51
IRF3-216ENST00000597180 NXT2Q9NPJ8 142 aaKnown RBP11.85□□□□□ -0.51
IRF3-216ENST00000597180 SPANXA1Q9NS26 97 aa11.85□□□□□ -0.51
IRF3-216ENST00000597180 TGIF2-C20orf24A0A0A6YYL0 155 aa11.84□□□□□ -0.51
IRF3-216ENST00000597180 GAGE12HA6NDE8 117 aa11.84□□□□□ -0.51
IRF3-216ENST00000597180 K7EMI3 77 aa11.84□□□□□ -0.51
IRF3-216ENST00000597180 MRPL18Q9H0U6 180 aaKnown RBP11.84□□□□□ -0.51
IRF3-216ENST00000597180 Q6ZUT4 128 aa11.83□□□□□ -0.52
IRF3-216ENST00000597180 FAM104AQ969W3 186 aa11.83□□□□□ -0.52
IRF3-216ENST00000597180 ALKBH7Q9BT30 221 aaPredicted RBP11.83□□□□□ -0.52
IRF3-216ENST00000597180 KIAA1109Q2LD37 5005 aa11.82□□□□□ -0.52
IRF3-216ENST00000597180 PRSS1P07477 247 aa11.82□□□□□ -0.52
IRF3-216ENST00000597180 IFI27P40305 119 aaPredicted RBP11.82□□□□□ -0.52
IRF3-216ENST00000597180 MRPS36P82909 103 aaKnown RBP11.82□□□□□ -0.52
IRF3-216ENST00000597180 SS18Q15532 418 aa11.82□□□□□ -0.52
IRF3-216ENST00000597180 CCL25O15444 150 aa11.81□□□□□ -0.52
IRF3-216ENST00000597180 FABP9Q0Z7S8 132 aa11.81□□□□□ -0.52
IRF3-216ENST00000597180 FOXI1Q12951 378 aa11.81□□□□□ -0.52
IRF3-216ENST00000597180 ORMDL2Q53FV1 153 aa11.81□□□□□ -0.52
IRF3-216ENST00000597180 RNASE13Q5GAN3 156 aaKnown RBP11.81□□□□□ -0.52
IRF3-216ENST00000597180 YPEL4Q96NS1 127 aa11.81□□□□□ -0.52
IRF3-216ENST00000597180 PYGO1Q9Y3Y4 419 aa11.81□□□□□ -0.52
IRF3-216ENST00000597180 XCL1P47992 114 aa11.8□□□□□ -0.52
IRF3-216ENST00000597180 CD164L2Q6UWJ8 174 aa11.79□□□□□ -0.52
IRF3-216ENST00000597180 C15orf56Q8N910 161 aa11.79□□□□□ -0.52
IRF3-216ENST00000597180 CYSLTR1Q9Y271 337 aa11.79□□□□□ -0.52
IRF3-216ENST00000597180 TRAPPC1Q9Y5R8 145 aa11.79□□□□□ -0.52
IRF3-216ENST00000597180 C1orf196B1AJZ1 125 aa11.78□□□□□ -0.52
IRF3-216ENST00000597180 CFAP161Q6P656 301 aa11.78□□□□□ -0.52
IRF3-216ENST00000597180 C2orf66Q6UXQ4 117 aa11.78□□□□□ -0.52
IRF3-216ENST00000597180 OPRPNQ99935 248 aaPredicted RBP11.78□□□□□ -0.52
IRF3-216ENST00000597180 APOBP04114 4563 aaKnown RBP11.77□□□□□ -0.52
IRF3-216ENST00000597180 LINC01546A6NGU7 62 aa11.77□□□□□ -0.53
IRF3-216ENST00000597180 PRSS3P2Q8NHM4 247 aa11.77□□□□□ -0.53
IRF3-216ENST00000597180 IGLV4-3A0A075B6K6 122 aa11.76□□□□□ -0.53
IRF3-216ENST00000597180 TRAV13-1A0A0B4J241 112 aa11.76□□□□□ -0.53
IRF3-216ENST00000597180 hDV102S1A0JD36 115 aa11.76□□□□□ -0.53
IRF3-216ENST00000597180 G0S2P27469 103 aa11.76□□□□□ -0.53
IRF3-216ENST00000597180 SMCO4Q9NRQ5 59 aa11.76□□□□□ -0.53
IRF3-216ENST00000597180 HSPG2P98160 4391 aa11.76□□□□□ -0.53
IRF3-216ENST00000597180 NPSP0C0P6 89 aa11.75□□□□□ -0.53
IRF3-216ENST00000597180 XGP55808 180 aa11.75□□□□□ -0.53
IRF3-216ENST00000597180 CNBPP62633 177 aaKnown RBP11.75□□□□□ -0.53
IRF3-216ENST00000597180 LINC01620Q4KN68 170 aa11.75□□□□□ -0.53
IRF3-216ENST00000597180 CBLN2Q8IUK8 224 aa11.75□□□□□ -0.53
IRF3-216ENST00000597180 HERC2O95714 4834 aa11.74□□□□□ -0.53
IRF3-216ENST00000597180 GVQW2A0A096LPI5 108 aaPredicted RBP11.74□□□□□ -0.53
IRF3-216ENST00000597180 Q6ZSA8 131 aa11.74□□□□□ -0.53
IRF3-216ENST00000597180 TMEM141Q96I45 108 aa11.74□□□□□ -0.53
IRF3-216ENST00000597180 IGIPA6NJ69 53 aa11.73□□□□□ -0.53
IRF3-216ENST00000597180 C9orf163Q8N9P6 203 aa11.73□□□□□ -0.53
IRF3-216ENST00000597180 TOMM6Q96B49 74 aa11.73□□□□□ -0.53
IRF3-216ENST00000597180 AP5S1Q9NUS5 200 aa11.73□□□□□ -0.53
IRF3-216ENST00000597180 FAM30AQ9NZY2 134 aa11.73□□□□□ -0.53
IRF3-216ENST00000597180 RYR1P21817 5038 aa11.73□□□□□ -0.53
IRF3-216ENST00000597180 IGHV1-58A0A0C4DH39 117 aa11.72□□□□□ -0.53
IRF3-216ENST00000597180 IFITM10A6NMD0 228 aa11.72□□□□□ -0.53
IRF3-216ENST00000597180 SLPIP03973 132 aa11.72□□□□□ -0.53
IRF3-216ENST00000597180 C18orf32Q8TCD1 76 aa11.72□□□□□ -0.53
IRF3-216ENST00000597180 COX7A2LO14548 114 aa11.71□□□□□ -0.53
IRF3-216ENST00000597180 HIGD2BQ4VC39 106 aa11.71□□□□□ -0.53
IRF3-216ENST00000597180 TEX43Q6ZNM6 134 aa11.71□□□□□ -0.53
IRF3-216ENST00000597180 FA2HQ7L5A8 372 aa11.71□□□□□ -0.53
IRF3-216ENST00000597180 AMELXQ99217 191 aa11.71□□□□□ -0.53
IRF3-216ENST00000597180 Q6ZN92 141 aa11.7□□□□□ -0.54
IRF3-216ENST00000597180 LINC00173Q6ZV60 143 aa11.7□□□□□ -0.54
IRF3-216ENST00000597180 TIMM17AQ99595 171 aa11.7□□□□□ -0.54
IRF3-216ENST00000597180 KRTAP17-1Q9BYP8 105 aa11.7□□□□□ -0.54
IRF3-216ENST00000597180 DNAH8Q96JB1 4490 aa11.69□□□□□ -0.54
IRF3-216ENST00000597180 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.69□□□□□ -0.54
IRF3-216ENST00000597180 IGHV3OR16-9A0A0B4J2B5 98 aa11.69□□□□□ -0.54
IRF3-216ENST00000597180 LINC01549A6NIU2 74 aa11.69□□□□□ -0.54
IRF3-216ENST00000597180 ERASQ7Z444 233 aa11.68□□□□□ -0.54
IRF3-216ENST00000597180 URB1-AS1Q96HZ7 61 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms