RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 SLC7A5P1Q8MH63 180 aa7.32□□□□□ -1.24
LIG1-211ENST00000596457 SVBPQ8N300 66 aa7.32□□□□□ -1.24
LIG1-211ENST00000596457 TMEM18Q96B42 140 aa7.32□□□□□ -1.24
LIG1-211ENST00000596457 MAP1LC3AQ9H492 121 aa7.32□□□□□ -1.24
LIG1-211ENST00000596457 TRAV8-4A0A0B4J246 113 aa7.31□□□□□ -1.24
LIG1-211ENST00000596457 ZNF25P17030 456 aaPredicted RBP7.31□□□□□ -1.24
LIG1-211ENST00000596457 RAB5AP20339 215 aa7.31□□□□□ -1.24
LIG1-211ENST00000596457 RPL32P62910 135 aaKnown RBP7.31□□□□□ -1.24
LIG1-211ENST00000596457 PKHD1P08F94 4074 aa7.31□□□□□ -1.24
LIG1-211ENST00000596457 GAGE12HA6NDE8 117 aa7.3□□□□□ -1.24
LIG1-211ENST00000596457 USP17L23D6RBM5 183 aa7.3□□□□□ -1.24
LIG1-211ENST00000596457 GCSHP23434 173 aa7.3□□□□□ -1.24
LIG1-211ENST00000596457 RPL39P62891 51 aaKnown RBP7.3□□□□□ -1.24
LIG1-211ENST00000596457 SMAGPQ0VAQ4 97 aa7.3□□□□□ -1.24
LIG1-211ENST00000596457 RNASE13Q5GAN3 156 aaKnown RBP7.3□□□□□ -1.24
LIG1-211ENST00000596457 CDPF1Q6NVV7 123 aa7.3□□□□□ -1.24
LIG1-211ENST00000596457 ZNF664Q8N3J9 261 aa7.3□□□□□ -1.24
LIG1-211ENST00000596457 DNAH11Q96DT5 4516 aa7.3□□□□□ -1.24
LIG1-211ENST00000596457 DMBT1Q9UGM3 2413 aaPredicted RBP7.29□□□□□ -1.24
LIG1-211ENST00000596457 TGIF2-C20orf24A0A0A6YYL0 155 aa7.29□□□□□ -1.24
LIG1-211ENST00000596457 FABP9Q0Z7S8 132 aa7.29□□□□□ -1.24
LIG1-211ENST00000596457 KRTAP26-1Q6PEX3 210 aa7.29□□□□□ -1.24
LIG1-211ENST00000596457 MRPL52Q86TS9 123 aaKnown RBP7.29□□□□□ -1.24
LIG1-211ENST00000596457 NTN5Q8WTR8 489 aaPredicted RBP7.29□□□□□ -1.24
LIG1-211ENST00000596457 GNB1LQ9BYB4 327 aa7.29□□□□□ -1.24
LIG1-211ENST00000596457 CDC42SE2Q9NRR3 84 aa7.29□□□□□ -1.24
LIG1-211ENST00000596457 LAMTOR2Q9Y2Q5 125 aa7.29□□□□□ -1.24
LIG1-211ENST00000596457 UBE2D4Q9Y2X8 147 aa7.29□□□□□ -1.24
LIG1-211ENST00000596457 KRTAP10-1P60331 282 aa7.28□□□□□ -1.24
LIG1-211ENST00000596457 SS18Q15532 418 aa7.28□□□□□ -1.24
LIG1-211ENST00000596457 COX19Q49B96 90 aa7.28□□□□□ -1.24
LIG1-211ENST00000596457 C14orf177Q52M58 125 aa7.28□□□□□ -1.24
LIG1-211ENST00000596457 Q8N8P6 123 aa7.28□□□□□ -1.24
LIG1-211ENST00000596457 CHCHD10Q8WYQ3 142 aaPredicted RBP7.28□□□□□ -1.24
LIG1-211ENST00000596457 MRPL18Q9H0U6 180 aaKnown RBP7.28□□□□□ -1.24
LIG1-211ENST00000596457 DYNC1H1Q14204 4646 aaKnown RBP7.28□□□□□ -1.24
LIG1-211ENST00000596457 LINC00959A0A1B0GUT2 108 aa7.27□□□□□ -1.25
LIG1-211ENST00000596457 PRSS47A8MTI9 375 aa7.27□□□□□ -1.25
LIG1-211ENST00000596457 CCL25O15444 150 aa7.27□□□□□ -1.25
LIG1-211ENST00000596457 IFI27P40305 119 aaPredicted RBP7.27□□□□□ -1.25
LIG1-211ENST00000596457 XCL1P47992 114 aa7.27□□□□□ -1.25
LIG1-211ENST00000596457 LINC01620Q4KN68 170 aa7.27□□□□□ -1.25
LIG1-211ENST00000596457 Q6ZUT4 128 aa7.27□□□□□ -1.25
LIG1-211ENST00000596457 OPRPNQ99935 248 aaPredicted RBP7.27□□□□□ -1.25
LIG1-211ENST00000596457 PRSS1P07477 247 aa7.26□□□□□ -1.25
LIG1-211ENST00000596457 PRSS3P2Q8NHM4 247 aa7.26□□□□□ -1.25
LIG1-211ENST00000596457 TRAPPC1Q9Y5R8 145 aa7.26□□□□□ -1.25
LIG1-211ENST00000596457 TRAV13-1A0A0B4J241 112 aa7.25□□□□□ -1.25
LIG1-211ENST00000596457 hDV102S1A0JD36 115 aa7.25□□□□□ -1.25
LIG1-211ENST00000596457 MT-ND6P03923 174 aa7.25□□□□□ -1.25
LIG1-211ENST00000596457 ALKBH7Q9BT30 221 aaPredicted RBP7.25□□□□□ -1.25
LIG1-211ENST00000596457 TIMM21Q9BVV7 248 aa7.25□□□□□ -1.25
LIG1-211ENST00000596457 NXT2Q9NPJ8 142 aaKnown RBP7.25□□□□□ -1.25
LIG1-211ENST00000596457 CSDC2Q9Y534 153 aaKnown RBP7.25□□□□□ -1.25
LIG1-211ENST00000596457 HAMPP81172 84 aa7.24□□□□□ -1.25
LIG1-211ENST00000596457 HIGD2BQ4VC39 106 aa7.24□□□□□ -1.25
LIG1-211ENST00000596457 ORMDL2Q53FV1 153 aa7.24□□□□□ -1.25
LIG1-211ENST00000596457 SPANXA1Q9NS26 97 aa7.24□□□□□ -1.25
LIG1-211ENST00000596457 FOXI1Q12951 378 aa7.23□□□□□ -1.25
LIG1-211ENST00000596457 CFAP161Q6P656 301 aa7.23□□□□□ -1.25
LIG1-211ENST00000596457 C2orf66Q6UXQ4 117 aa7.23□□□□□ -1.25
LIG1-211ENST00000596457 Q8N1X5 172 aa7.23□□□□□ -1.25
LIG1-211ENST00000596457 AP5S1Q9NUS5 200 aa7.23□□□□□ -1.25
LIG1-211ENST00000596457 CYSLTR1Q9Y271 337 aa7.23□□□□□ -1.25
LIG1-211ENST00000596457 IFITM10A6NMD0 228 aa7.22□□□□□ -1.25
LIG1-211ENST00000596457 C1orf196B1AJZ1 125 aa7.22□□□□□ -1.25
LIG1-211ENST00000596457 FA2HQ7L5A8 372 aa7.22□□□□□ -1.25
LIG1-211ENST00000596457 CBLN2Q8IUK8 224 aa7.22□□□□□ -1.25
LIG1-211ENST00000596457 SMCO4Q9NRQ5 59 aa7.22□□□□□ -1.25
LIG1-211ENST00000596457 MALP21145 153 aa7.21□□□□□ -1.26
LIG1-211ENST00000596457 MRPS36P82909 103 aaKnown RBP7.21□□□□□ -1.26
LIG1-211ENST00000596457 ZC2HC1BQ5TFG8 222 aa7.21□□□□□ -1.26
LIG1-211ENST00000596457 CD164L2Q6UWJ8 174 aa7.21□□□□□ -1.26
LIG1-211ENST00000596457 C5orf38Q86SI9 138 aa7.21□□□□□ -1.26
LIG1-211ENST00000596457 C15orf56Q8N910 161 aa7.21□□□□□ -1.26
LIG1-211ENST00000596457 FAM30AQ9NZY2 134 aa7.21□□□□□ -1.26
LIG1-211ENST00000596457 HSPG2P98160 4391 aa7.21□□□□□ -1.26
LIG1-211ENST00000596457 IGLV4-3A0A075B6K6 122 aa7.2□□□□□ -1.26
LIG1-211ENST00000596457 K7EMI3 77 aa7.2□□□□□ -1.26
LIG1-211ENST00000596457 XGP55808 180 aa7.2□□□□□ -1.26
LIG1-211ENST00000596457 FAM104AQ969W3 186 aa7.2□□□□□ -1.26
LIG1-211ENST00000596457 LINC00526Q96FQ7 95 aa7.2□□□□□ -1.26
LIG1-211ENST00000596457 TMEM141Q96I45 108 aa7.2□□□□□ -1.26
LIG1-211ENST00000596457 PYGO1Q9Y3Y4 419 aa7.2□□□□□ -1.26
LIG1-211ENST00000596457 IGHV1-58A0A0C4DH39 117 aa7.19□□□□□ -1.26
LIG1-211ENST00000596457 COX7A2LO14548 114 aa7.19□□□□□ -1.26
LIG1-211ENST00000596457 G0S2P27469 103 aa7.19□□□□□ -1.26
LIG1-211ENST00000596457 Q6ZN92 141 aa7.19□□□□□ -1.26
LIG1-211ENST00000596457 TEX43Q6ZNM6 134 aa7.19□□□□□ -1.26
LIG1-211ENST00000596457 VCX2Q9H322 139 aa7.19□□□□□ -1.26
LIG1-211ENST00000596457 DNAH5Q8TE73 4624 aa7.18□□□□□ -1.26
LIG1-211ENST00000596457 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.18□□□□□ -1.26
LIG1-211ENST00000596457 ZNF561-AS1K7EIQ3 104 aa7.18□□□□□ -1.26
LIG1-211ENST00000596457 SMR3BP02814 79 aaPredicted RBP7.18□□□□□ -1.26
LIG1-211ENST00000596457 SLPIP03973 132 aa7.18□□□□□ -1.26
LIG1-211ENST00000596457 C9orf163Q8N9P6 203 aa7.18□□□□□ -1.26
LIG1-211ENST00000596457 C18orf32Q8TCD1 76 aa7.18□□□□□ -1.26
LIG1-211ENST00000596457 TOMM6Q96B49 74 aa7.18□□□□□ -1.26
LIG1-211ENST00000596457 YPEL4Q96NS1 127 aa7.18□□□□□ -1.26
LIG1-211ENST00000596457 SCGB3A1Q96QR1 104 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms