RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 MRPL52Q86TS9 123 aaKnown RBP9.06□□□□□ -0.96
SHKBP1-207ENST00000595631 TMEM101Q96IK0 257 aa9.06□□□□□ -0.96
SHKBP1-207ENST00000595631 MAP1LC3AQ9H492 121 aa9.06□□□□□ -0.96
SHKBP1-207ENST00000595631 UBE2D4Q9Y2X8 147 aa9.06□□□□□ -0.96
SHKBP1-207ENST00000595631 IGLV5-52A0A0A0MRZ9 124 aa9.05□□□□□ -0.96
SHKBP1-207ENST00000595631 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
SHKBP1-207ENST00000595631 KRTAP10-1P60331 282 aa9.05□□□□□ -0.96
SHKBP1-207ENST00000595631 RNASE13Q5GAN3 156 aaKnown RBP9.05□□□□□ -0.96
SHKBP1-207ENST00000595631 CDPF1Q6NVV7 123 aa9.05□□□□□ -0.96
SHKBP1-207ENST00000595631 LAMTOR2Q9Y2Q5 125 aa9.05□□□□□ -0.96
SHKBP1-207ENST00000595631 TRAV8-4A0A0B4J246 113 aa9.04□□□□□ -0.96
SHKBP1-207ENST00000595631 PRSS47A8MTI9 375 aa9.04□□□□□ -0.96
SHKBP1-207ENST00000595631 Q6ZUT4 128 aa9.04□□□□□ -0.96
SHKBP1-207ENST00000595631 ZNF664Q8N3J9 261 aa9.04□□□□□ -0.96
SHKBP1-207ENST00000595631 GNB1LQ9BYB4 327 aa9.04□□□□□ -0.96
SHKBP1-207ENST00000595631 CDC42SE2Q9NRR3 84 aa9.04□□□□□ -0.96
SHKBP1-207ENST00000595631 GAGE12HA6NDE8 117 aa9.03□□□□□ -0.96
SHKBP1-207ENST00000595631 DGAT2L7PQ6IED9 249 aa9.03□□□□□ -0.96
SHKBP1-207ENST00000595631 Q8N8P6 123 aa9.03□□□□□ -0.96
SHKBP1-207ENST00000595631 NTN5Q8WTR8 489 aaPredicted RBP9.03□□□□□ -0.96
SHKBP1-207ENST00000595631 CHCHD10Q8WYQ3 142 aaPredicted RBP9.03□□□□□ -0.96
SHKBP1-207ENST00000595631 LRP1BQ9NZR2 4599 aa9.03□□□□□ -0.96
SHKBP1-207ENST00000595631 GCSHP23434 173 aa9.02□□□□□ -0.97
SHKBP1-207ENST00000595631 LINC01620Q4KN68 170 aa9.02□□□□□ -0.97
SHKBP1-207ENST00000595631 FAM104AQ969W3 186 aa9.02□□□□□ -0.97
SHKBP1-207ENST00000595631 OPRPNQ99935 248 aaPredicted RBP9.02□□□□□ -0.97
SHKBP1-207ENST00000595631 MRPL18Q9H0U6 180 aaKnown RBP9.02□□□□□ -0.97
SHKBP1-207ENST00000595631 LINC00959A0A1B0GUT2 108 aa9.01□□□□□ -0.97
SHKBP1-207ENST00000595631 PRSS1P07477 247 aa9.01□□□□□ -0.97
SHKBP1-207ENST00000595631 RAB5AP20339 215 aa9.01□□□□□ -0.97
SHKBP1-207ENST00000595631 IFI27P40305 119 aaPredicted RBP9.01□□□□□ -0.97
SHKBP1-207ENST00000595631 TMEM18Q96B42 140 aa9.01□□□□□ -0.97
SHKBP1-207ENST00000595631 TIMM21Q9BVV7 248 aa9.01□□□□□ -0.97
SHKBP1-207ENST00000595631 CCL25O15444 150 aa9□□□□□ -0.97
SHKBP1-207ENST00000595631 XCL1P47992 114 aa9□□□□□ -0.97
SHKBP1-207ENST00000595631 FABP9Q0Z7S8 132 aa9□□□□□ -0.97
SHKBP1-207ENST00000595631 COX19Q49B96 90 aa9□□□□□ -0.97
SHKBP1-207ENST00000595631 YPEL4Q96NS1 127 aa9□□□□□ -0.97
SHKBP1-207ENST00000595631 ALKBH7Q9BT30 221 aaPredicted RBP9□□□□□ -0.97
SHKBP1-207ENST00000595631 CSDC2Q9Y534 153 aaKnown RBP9□□□□□ -0.97
SHKBP1-207ENST00000595631 MT-ND6P03923 174 aa8.99□□□□□ -0.97
SHKBP1-207ENST00000595631 SMAGPQ0VAQ4 97 aa8.99□□□□□ -0.97
SHKBP1-207ENST00000595631 FOXI1Q12951 378 aa8.99□□□□□ -0.97
SHKBP1-207ENST00000595631 CBLN2Q8IUK8 224 aa8.99□□□□□ -0.97
SHKBP1-207ENST00000595631 KRTAP17-1Q9BYP8 105 aa8.99□□□□□ -0.97
SHKBP1-207ENST00000595631 CDK2AP2O75956 126 aa8.98□□□□□ -0.97
SHKBP1-207ENST00000595631 HAMPP81172 84 aa8.98□□□□□ -0.97
SHKBP1-207ENST00000595631 SS18Q15532 418 aa8.98□□□□□ -0.97
SHKBP1-207ENST00000595631 C14orf177Q52M58 125 aa8.98□□□□□ -0.97
SHKBP1-207ENST00000595631 C15orf56Q8N910 161 aa8.98□□□□□ -0.97
SHKBP1-207ENST00000595631 NXT2Q9NPJ8 142 aaKnown RBP8.98□□□□□ -0.97
SHKBP1-207ENST00000595631 SPANXA1Q9NS26 97 aa8.98□□□□□ -0.97
SHKBP1-207ENST00000595631 TRAPPC1Q9Y5R8 145 aa8.98□□□□□ -0.97
SHKBP1-207ENST00000595631 KIAA1109Q2LD37 5005 aa8.97□□□□□ -0.97
SHKBP1-207ENST00000595631 TRAV13-1A0A0B4J241 112 aa8.97□□□□□ -0.97
SHKBP1-207ENST00000595631 APOBP04114 4563 aaKnown RBP8.97□□□□□ -0.97
SHKBP1-207ENST00000595631 IGLV4-3A0A075B6K6 122 aa8.96□□□□□ -0.98
SHKBP1-207ENST00000595631 hDV102S1A0JD36 115 aa8.96□□□□□ -0.98
SHKBP1-207ENST00000595631 HIGD2BQ4VC39 106 aa8.96□□□□□ -0.98
SHKBP1-207ENST00000595631 ORMDL2Q53FV1 153 aa8.96□□□□□ -0.98
SHKBP1-207ENST00000595631 C2orf66Q6UXQ4 117 aa8.96□□□□□ -0.98
SHKBP1-207ENST00000595631 PRSS3P2Q8NHM4 247 aa8.96□□□□□ -0.98
SHKBP1-207ENST00000595631 FAM30AQ9NZY2 134 aa8.96□□□□□ -0.98
SHKBP1-207ENST00000595631 HSPG2P98160 4391 aa8.96□□□□□ -0.98
SHKBP1-207ENST00000595631 SLPIP03973 132 aa8.95□□□□□ -0.98
SHKBP1-207ENST00000595631 XGP55808 180 aa8.95□□□□□ -0.98
SHKBP1-207ENST00000595631 MRPS36P82909 103 aaKnown RBP8.95□□□□□ -0.98
SHKBP1-207ENST00000595631 ZC2HC1BQ5TFG8 222 aa8.95□□□□□ -0.98
SHKBP1-207ENST00000595631 SMCO4Q9NRQ5 59 aa8.95□□□□□ -0.98
SHKBP1-207ENST00000595631 CYSLTR1Q9Y271 337 aa8.95□□□□□ -0.98
SHKBP1-207ENST00000595631 K7EMI3 77 aa8.94□□□□□ -0.98
SHKBP1-207ENST00000595631 CD164L2Q6UWJ8 174 aa8.94□□□□□ -0.98
SHKBP1-207ENST00000595631 PYGO1Q9Y3Y4 419 aa8.94□□□□□ -0.98
SHKBP1-207ENST00000595631 IFITM10A6NMD0 228 aa8.93□□□□□ -0.98
SHKBP1-207ENST00000595631 C1orf196B1AJZ1 125 aa8.93□□□□□ -0.98
SHKBP1-207ENST00000595631 LINC00526Q96FQ7 95 aa8.93□□□□□ -0.98
SHKBP1-207ENST00000595631 LINC00173Q6ZV60 143 aa8.92□□□□□ -0.98
SHKBP1-207ENST00000595631 C5orf38Q86SI9 138 aa8.92□□□□□ -0.98
SHKBP1-207ENST00000595631 C18orf32Q8TCD1 76 aa8.92□□□□□ -0.98
SHKBP1-207ENST00000595631 URB1-AS1Q96HZ7 61 aa8.92□□□□□ -0.98
SHKBP1-207ENST00000595631 TMEM141Q96I45 108 aa8.92□□□□□ -0.98
SHKBP1-207ENST00000595631 GVQW2A0A096LPI5 108 aaPredicted RBP8.91□□□□□ -0.98
SHKBP1-207ENST00000595631 LINC01546A6NGU7 62 aa8.91□□□□□ -0.98
SHKBP1-207ENST00000595631 IGIPA6NJ69 53 aa8.91□□□□□ -0.98
SHKBP1-207ENST00000595631 CFAP161Q6P656 301 aa8.91□□□□□ -0.98
SHKBP1-207ENST00000595631 FA2HQ7L5A8 372 aa8.91□□□□□ -0.98
SHKBP1-207ENST00000595631 TOMM6Q96B49 74 aa8.91□□□□□ -0.98
SHKBP1-207ENST00000595631 DNAH8Q96JB1 4490 aa8.91□□□□□ -0.98
SHKBP1-207ENST00000595631 IGHV1-58A0A0C4DH39 117 aa8.9□□□□□ -0.98
SHKBP1-207ENST00000595631 COX7A2LO14548 114 aa8.9□□□□□ -0.98
SHKBP1-207ENST00000595631 SCO1O75880 301 aa8.9□□□□□ -0.98
SHKBP1-207ENST00000595631 CNBPP62633 177 aaKnown RBP8.9□□□□□ -0.98
SHKBP1-207ENST00000595631 Q6ZSA8 131 aa8.9□□□□□ -0.98
SHKBP1-207ENST00000595631 C9orf163Q8N9P6 203 aa8.9□□□□□ -0.98
SHKBP1-207ENST00000595631 KRTAP4-5Q9BYR2 181 aa8.9□□□□□ -0.98
SHKBP1-207ENST00000595631 AP5S1Q9NUS5 200 aa8.9□□□□□ -0.98
SHKBP1-207ENST00000595631 HERC2O95714 4834 aa8.89□□□□□ -0.99
SHKBP1-207ENST00000595631 COX6A2Q02221 97 aa8.89□□□□□ -0.99
SHKBP1-207ENST00000595631 TEX43Q6ZNM6 134 aa8.89□□□□□ -0.99
SHKBP1-207ENST00000595631 MALP21145 153 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms