RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 MRAP2Q96G30 205 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 ST20Q9HBF5 79 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 MYCBP2O75592 4640 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 TRBV27A0A0K0K1C4 114 aa3.75□□□□□ -1.81
SSX4B-201ENST00000595235 SMIM27A0A1W2PRY6 76 aa3.75□□□□□ -1.81
SSX4B-201ENST00000595235 CNBPP62633 177 aaKnown RBP3.75□□□□□ -1.81
SSX4B-201ENST00000595235 HIGD2BQ4VC39 106 aa3.75□□□□□ -1.81
SSX4B-201ENST00000595235 SDIM1Q6ZPB5 146 aa3.75□□□□□ -1.81
SSX4B-201ENST00000595235 NRACQ8N912 160 aa3.75□□□□□ -1.81
SSX4B-201ENST00000595235 CLRN3Q8NCR9 226 aa3.75□□□□□ -1.81
SSX4B-201ENST00000595235 OR5A1Q8NGJ0 315 aa3.75□□□□□ -1.81
SSX4B-201ENST00000595235 CHCHD10Q8WYQ3 142 aaPredicted RBP3.75□□□□□ -1.81
SSX4B-201ENST00000595235 NAT8BQ9UHF3 227 aa3.75□□□□□ -1.81
SSX4B-201ENST00000595235 LINC00959A0A1B0GUT2 108 aa3.74□□□□□ -1.81
SSX4B-201ENST00000595235 C7orf77A4D0Y5 90 aa3.74□□□□□ -1.81
SSX4B-201ENST00000595235 CHTF8P0CG12 524 aa3.74□□□□□ -1.81
SSX4B-201ENST00000595235 ZNF25P17030 456 aaPredicted RBP3.74□□□□□ -1.81
SSX4B-201ENST00000595235 SUMO2P61956 95 aaKnown RBP3.74□□□□□ -1.81
SSX4B-201ENST00000595235 FOXI1Q12951 378 aa3.74□□□□□ -1.81
SSX4B-201ENST00000595235 CIRBPQ14011 172 aaKnown RBP3.74□□□□□ -1.81
SSX4B-201ENST00000595235 MRPL51Q4U2R6 128 aaKnown RBP3.74□□□□□ -1.81
SSX4B-201ENST00000595235 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
SSX4B-201ENST00000595235 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
SSX4B-201ENST00000595235 SMDT1Q9H4I9 107 aa3.74□□□□□ -1.81
SSX4B-201ENST00000595235 IGHV3-64A0A075B6Q5 118 aa3.73□□□□□ -1.81
SSX4B-201ENST00000595235 GVQW2A0A096LPI5 108 aaPredicted RBP3.73□□□□□ -1.81
SSX4B-201ENST00000595235 A0A1B0GXF2 115 aa3.73□□□□□ -1.81
SSX4B-201ENST00000595235 CCL25O15444 150 aa3.73□□□□□ -1.81
SSX4B-201ENST00000595235 XCL1P47992 114 aa3.73□□□□□ -1.81
SSX4B-201ENST00000595235 CAMPP49913 170 aa3.73□□□□□ -1.81
SSX4B-201ENST00000595235 HNRNPA3P51991 378 aaKnown RBP3.73□□□□□ -1.81
SSX4B-201ENST00000595235 RNASE13Q5GAN3 156 aaKnown RBP3.73□□□□□ -1.81
SSX4B-201ENST00000595235 FAM104BQ5XKR9 115 aa3.73□□□□□ -1.81
SSX4B-201ENST00000595235 MRPL54Q6P161 138 aaKnown RBP3.73□□□□□ -1.81
SSX4B-201ENST00000595235 MRPL52Q86TS9 123 aaKnown RBP3.73□□□□□ -1.81
SSX4B-201ENST00000595235 TMEM101Q96IK0 257 aa3.73□□□□□ -1.81
SSX4B-201ENST00000595235 BTF3L4Q96K17 158 aa3.73□□□□□ -1.81
SSX4B-201ENST00000595235 CDC42SE2Q9NRR3 84 aa3.73□□□□□ -1.81
SSX4B-201ENST00000595235 AP5S1Q9NUS5 200 aa3.73□□□□□ -1.81
SSX4B-201ENST00000595235 UBE2D4Q9Y2X8 147 aa3.73□□□□□ -1.81
SSX4B-201ENST00000595235 HERC1Q15751 4861 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.72□□□□□ -1.81
SSX4B-201ENST00000595235 KRTAP29-1A8MX34 341 aaPredicted RBP3.72□□□□□ -1.81
SSX4B-201ENST00000595235 D6R8Y8 96 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 VCYO14598 125 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 PPP1R2P9O14990 202 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 PPP1R17O96001 155 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 NPYP01303 97 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 FCER1GP30273 86 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 RPL37AP61513 92 aaKnown RBP3.72□□□□□ -1.81
SSX4B-201ENST00000595235 HBBP68871 147 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 CFAP161Q6P656 301 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 Q6ZUT4 128 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 ZNF664Q8N3J9 261 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 SPACA4Q8TDM5 124 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 LINC00526Q96FQ7 95 aa3.72□□□□□ -1.81
SSX4B-201ENST00000595235 TRBV24-1A0A075B6N3 115 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 A0A087WYN8 130 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 IGHV1-58A0A0C4DH39 117 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 A0A1B0GW15 77 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 LINC00862A6NCI5 91 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 TNFRSF6BO95407 300 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 CKS2P33552 79 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 RPL39P62891 51 aaKnown RBP3.71□□□□□ -1.82
SSX4B-201ENST00000595235 COX6A2Q02221 97 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 SS18Q15532 418 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 PRSS3P2Q8NHM4 247 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 FAM104AQ969W3 186 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 KIR2DL4Q99706 377 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 C20orf78Q9BR46 151 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 SMIM2Q9BVW6 85 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 CSDC2Q9Y534 153 aaKnown RBP3.71□□□□□ -1.82
SSX4B-201ENST00000595235 PKHD1L1Q86WI1 4243 aa3.71□□□□□ -1.82
SSX4B-201ENST00000595235 A0A096LNI7 61 aa3.7□□□□□ -1.82
SSX4B-201ENST00000595235 TRAV13-1A0A0B4J241 112 aa3.7□□□□□ -1.82
SSX4B-201ENST00000595235 IGKV2-24A0A0C4DH68 120 aa3.7□□□□□ -1.82
SSX4B-201ENST00000595235 F8W036 122 aa3.7□□□□□ -1.82
SSX4B-201ENST00000595235 TCAPO15273 167 aa3.7□□□□□ -1.82
SSX4B-201ENST00000595235 S100A8P05109 93 aa3.7□□□□□ -1.82
SSX4B-201ENST00000595235 RPL32P62910 135 aaKnown RBP3.7□□□□□ -1.82
SSX4B-201ENST00000595235 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
SSX4B-201ENST00000595235 CD164L2Q6UWJ8 174 aa3.7□□□□□ -1.82
SSX4B-201ENST00000595235 ATP5L2Q7Z4Y8 100 aa3.7□□□□□ -1.82
SSX4B-201ENST00000595235 PLAC8Q9NZF1 115 aa3.7□□□□□ -1.82
SSX4B-201ENST00000595235 FAT3Q8TDW7 4589 aa3.7□□□□□ -1.82
SSX4B-201ENST00000595235 IGLV4-69A0A075B6H9 119 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 C1orf196B1AJZ1 125 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 PHOX2AO14813 284 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 ADCYAP1P18509 176 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 LINC00310P59036 64 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 RAB14P61106 215 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 IFITM2Q01629 132 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 PNRC1Q12796 327 aaPredicted RBP3.69□□□□□ -1.82
SSX4B-201ENST00000595235 MAJINQ3KP22 176 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 CLLU1Q5K131 121 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 ORMDL3Q8N138 153 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 TMEM18Q96B42 140 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 CARD19Q96LW7 228 aa3.69□□□□□ -1.82
SSX4B-201ENST00000595235 OPRPNQ99935 248 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms