RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 PKHD1P08F94 4074 aa11.2□□□□□ -0.62
USHBP1-204ENST00000594190 DNAH17Q9UFH2 4485 aa11.2□□□□□ -0.62
USHBP1-204ENST00000594190 DEFB131BA0A096LNP1 70 aa11.19□□□□□ -0.62
USHBP1-204ENST00000594190 TRBV6-8A0A0A6YYG3 113 aa11.19□□□□□ -0.62
USHBP1-204ENST00000594190 PRSS1P07477 247 aa11.19□□□□□ -0.62
USHBP1-204ENST00000594190 LINC01545Q5VT33 79 aa11.19□□□□□ -0.62
USHBP1-204ENST00000594190 A0A0J9YY99 117 aa11.18□□□□□ -0.62
USHBP1-204ENST00000594190 UBE2L6O14933 153 aa11.18□□□□□ -0.62
USHBP1-204ENST00000594190 TCTAP57738 103 aa11.18□□□□□ -0.62
USHBP1-204ENST00000594190 TIRAPP58753 221 aa11.18□□□□□ -0.62
USHBP1-204ENST00000594190 PKIAP61925 76 aa11.18□□□□□ -0.62
USHBP1-204ENST00000594190 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
USHBP1-204ENST00000594190 MRPL52Q86TS9 123 aaKnown RBP11.18□□□□□ -0.62
USHBP1-204ENST00000594190 LINC00518Q8N0U6 118 aa11.18□□□□□ -0.62
USHBP1-204ENST00000594190 CSDC2Q9Y534 153 aaKnown RBP11.18□□□□□ -0.62
USHBP1-204ENST00000594190 ZNF25P17030 456 aaPredicted RBP11.17□□□□□ -0.62
USHBP1-204ENST00000594190 S100A12P80511 92 aa11.17□□□□□ -0.62
USHBP1-204ENST00000594190 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
USHBP1-204ENST00000594190 MRPS36P82909 103 aaKnown RBP11.16□□□□□ -0.62
USHBP1-204ENST00000594190 PMVKQ15126 192 aa11.16□□□□□ -0.62
USHBP1-204ENST00000594190 DGAT2L7PQ6IED9 249 aa11.16□□□□□ -0.62
USHBP1-204ENST00000594190 C15orf53Q8NAA6 179 aa11.16□□□□□ -0.62
USHBP1-204ENST00000594190 C12orf57Q99622 126 aa11.16□□□□□ -0.62
USHBP1-204ENST00000594190 UBE2D4Q9Y2X8 147 aa11.16□□□□□ -0.62
USHBP1-204ENST00000594190 Q8N976 141 aa11.15□□□□□ -0.62
USHBP1-204ENST00000594190 BAALCQ8WXS3 180 aa11.15□□□□□ -0.62
USHBP1-204ENST00000594190 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.14□□□□□ -0.63
USHBP1-204ENST00000594190 A0A087WX48 190 aa11.14□□□□□ -0.63
USHBP1-204ENST00000594190 A0A096LPF7 62 aa11.14□□□□□ -0.63
USHBP1-204ENST00000594190 IGKV2-29A2NJV5 120 aaPredicted RBP11.14□□□□□ -0.63
USHBP1-204ENST00000594190 H0Y8G0 127 aa11.14□□□□□ -0.63
USHBP1-204ENST00000594190 DEFB104AQ8WTQ1 72 aa11.14□□□□□ -0.63
USHBP1-204ENST00000594190 TMEM101Q96IK0 257 aa11.14□□□□□ -0.63
USHBP1-204ENST00000594190 IGLV4-3A0A075B6K6 122 aa11.13□□□□□ -0.63
USHBP1-204ENST00000594190 FGF6P10767 208 aa11.13□□□□□ -0.63
USHBP1-204ENST00000594190 PLNP26678 52 aa11.13□□□□□ -0.63
USHBP1-204ENST00000594190 ODF1Q14990 250 aa11.13□□□□□ -0.63
USHBP1-204ENST00000594190 AMMECR1LQ6DCA0 310 aa11.13□□□□□ -0.63
USHBP1-204ENST00000594190 TEX43Q6ZNM6 134 aa11.13□□□□□ -0.63
USHBP1-204ENST00000594190 CHCHD5Q9BSY4 110 aa11.13□□□□□ -0.63
USHBP1-204ENST00000594190 VCX2Q9H322 139 aa11.13□□□□□ -0.63
USHBP1-204ENST00000594190 PCLOQ9Y6V0 5065 aa11.13□□□□□ -0.63
USHBP1-204ENST00000594190 F8VRH5 84 aa11.12□□□□□ -0.63
USHBP1-204ENST00000594190 LELP1Q5T871 98 aa11.12□□□□□ -0.63
USHBP1-204ENST00000594190 OR5A1Q8NGJ0 315 aa11.12□□□□□ -0.63
USHBP1-204ENST00000594190 C2orf88Q9BSF0 95 aa11.12□□□□□ -0.63
USHBP1-204ENST00000594190 PKD1P98161 4303 aa11.12□□□□□ -0.63
USHBP1-204ENST00000594190 KIAA1109Q2LD37 5005 aa11.12□□□□□ -0.63
USHBP1-204ENST00000594190 IGLL5B9A064 214 aa11.11□□□□□ -0.63
USHBP1-204ENST00000594190 HSBP1L1C9JCN9 74 aa11.11□□□□□ -0.63
USHBP1-204ENST00000594190 DPM2O94777 84 aa11.11□□□□□ -0.63
USHBP1-204ENST00000594190 AMELXQ99217 191 aa11.11□□□□□ -0.63
USHBP1-204ENST00000594190 CST9LQ9H4G1 147 aa11.11□□□□□ -0.63
USHBP1-204ENST00000594190 CHTOPQ9Y3Y2 248 aaKnown RBP11.11□□□□□ -0.63
USHBP1-204ENST00000594190 DYNC1H1Q14204 4646 aaKnown RBP11.1□□□□□ -0.63
USHBP1-204ENST00000594190 A0A1B0GUV1 79 aa11.1□□□□□ -0.63
USHBP1-204ENST00000594190 PRSS29PA6NIE9 313 aa11.1□□□□□ -0.63
USHBP1-204ENST00000594190 VAMP8Q9BV40 100 aa11.1□□□□□ -0.63
USHBP1-204ENST00000594190 TRAV9-2A0A087WT02 112 aa11.09□□□□□ -0.63
USHBP1-204ENST00000594190 TRAV8-6A0A0B4J262 113 aa11.09□□□□□ -0.63
USHBP1-204ENST00000594190 IGKCP01834 107 aa11.09□□□□□ -0.63
USHBP1-204ENST00000594190 LYPD5Q6UWN5 251 aa11.08□□□□□ -0.64
USHBP1-204ENST00000594190 MRPL35Q9NZE8 188 aaKnown RBP11.08□□□□□ -0.64
USHBP1-204ENST00000594190 SEC11AP67812 179 aa11.07□□□□□ -0.64
USHBP1-204ENST00000594190 GAGE6Q13070 117 aa11.07□□□□□ -0.64
USHBP1-204ENST00000594190 ZNF664Q8N3J9 261 aa11.07□□□□□ -0.64
USHBP1-204ENST00000594190 CDC42SE2Q9NRR3 84 aa11.07□□□□□ -0.64
USHBP1-204ENST00000594190 Q6ZUT4 128 aa11.06□□□□□ -0.64
USHBP1-204ENST00000594190 TMEM262E9PQX1 116 aa11.05□□□□□ -0.64
USHBP1-204ENST00000594190 NFE4Q86UQ8 179 aa11.05□□□□□ -0.64
USHBP1-204ENST00000594190 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
USHBP1-204ENST00000594190 OPRPNQ99935 248 aaPredicted RBP11.05□□□□□ -0.64
USHBP1-204ENST00000594190 CCL25O15444 150 aa11.04□□□□□ -0.64
USHBP1-204ENST00000594190 IGLC3P0DOY3 106 aa11.04□□□□□ -0.64
USHBP1-204ENST00000594190 FAM19A3Q7Z5A8 133 aa11.04□□□□□ -0.64
USHBP1-204ENST00000594190 PMCHL2Q9BQD1 86 aa11.04□□□□□ -0.64
USHBP1-204ENST00000594190 A0A1B0GVY2 172 aa11.03□□□□□ -0.64
USHBP1-204ENST00000594190 RBX1P62877 108 aa11.03□□□□□ -0.64
USHBP1-204ENST00000594190 CDPF1Q6NVV7 123 aa11.03□□□□□ -0.64
USHBP1-204ENST00000594190 ATOH7Q8N100 152 aa11.03□□□□□ -0.64
USHBP1-204ENST00000594190 DNAH11Q96DT5 4516 aa11.03□□□□□ -0.64
USHBP1-204ENST00000594190 IGLV4-69A0A075B6H9 119 aa11.02□□□□□ -0.65
USHBP1-204ENST00000594190 TINCRA0A1B0GVN0 87 aa11.02□□□□□ -0.65
USHBP1-204ENST00000594190 TSTD3H0UI37 97 aa11.02□□□□□ -0.65
USHBP1-204ENST00000594190 UBE2D1P51668 147 aa11.02□□□□□ -0.65
USHBP1-204ENST00000594190 SPATA45Q537H7 98 aa11.02□□□□□ -0.65
USHBP1-204ENST00000594190 PAM16Q9Y3D7 125 aa11.02□□□□□ -0.65
USHBP1-204ENST00000594190 C11orf86A6NJI1 115 aa11.01□□□□□ -0.65
USHBP1-204ENST00000594190 CCL18P55774 89 aa11.01□□□□□ -0.65
USHBP1-204ENST00000594190 HERVK_113P61574 105 aa11.01□□□□□ -0.65
USHBP1-204ENST00000594190 CHAC1Q9BUX1 264 aa11.01□□□□□ -0.65
USHBP1-204ENST00000594190 HERVK_113P63121 156 aa11□□□□□ -0.65
USHBP1-204ENST00000594190 ESRGQ1W209 222 aa11□□□□□ -0.65
USHBP1-204ENST00000594190 MPV17L2Q567V2 206 aa11□□□□□ -0.65
USHBP1-204ENST00000594190 ZC2HC1BQ5TFG8 222 aa11□□□□□ -0.65
USHBP1-204ENST00000594190 LINC00336Q6ZUF6 198 aa11□□□□□ -0.65
USHBP1-204ENST00000594190 GEMIN7Q9H840 131 aaKnown RBP11□□□□□ -0.65
USHBP1-204ENST00000594190 IGLV4-60A0A075B6I1 120 aa10.99□□□□□ -0.65
USHBP1-204ENST00000594190 A0A0J9YXV3 536 aa10.98□□□□□ -0.65
USHBP1-204ENST00000594190 hDV102S1A0JD36 115 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms