RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 GCSHP23434 173 aa9.36□□□□□ -0.91
VRK3-205ENST00000593919 PMVKQ15126 192 aa9.36□□□□□ -0.91
VRK3-205ENST00000593919 DEFB121Q5J5C9 76 aa9.36□□□□□ -0.91
VRK3-205ENST00000593919 IGLV4-69A0A075B6H9 119 aa9.35□□□□□ -0.91
VRK3-205ENST00000593919 C11orf86A6NJI1 115 aa9.35□□□□□ -0.91
VRK3-205ENST00000593919 OPRPNQ99935 248 aaPredicted RBP9.35□□□□□ -0.91
VRK3-205ENST00000593919 CST9LQ9H4G1 147 aa9.35□□□□□ -0.91
VRK3-205ENST00000593919 COL7A1Q02388 2944 aa9.34□□□□□ -0.91
VRK3-205ENST00000593919 K7EQD1 137 aa9.34□□□□□ -0.91
VRK3-205ENST00000593919 SLC25A29Q8N8R3 303 aa9.34□□□□□ -0.91
VRK3-205ENST00000593919 PRADC1Q9BSG0 188 aa9.34□□□□□ -0.91
VRK3-205ENST00000593919 TNFRSF18Q9Y5U5 241 aa9.34□□□□□ -0.91
VRK3-205ENST00000593919 TRGV4A0A0C4DH28 118 aa9.33□□□□□ -0.92
VRK3-205ENST00000593919 FXYD2P54710 66 aa9.33□□□□□ -0.92
VRK3-205ENST00000593919 OCIAD2Q56VL3 154 aa9.33□□□□□ -0.92
VRK3-205ENST00000593919 AMMECR1LQ6DCA0 310 aa9.33□□□□□ -0.92
VRK3-205ENST00000593919 C20orf203Q8NBC4 194 aa9.33□□□□□ -0.92
VRK3-205ENST00000593919 MRAPQ8TCY5 172 aa9.33□□□□□ -0.92
VRK3-205ENST00000593919 RAB37Q96AX2 223 aa9.33□□□□□ -0.92
VRK3-205ENST00000593919 MYMXA0A1B0GTQ4 84 aa9.33□□□□□ -0.92
VRK3-205ENST00000593919 E9PLD3 99 aa9.33□□□□□ -0.92
VRK3-205ENST00000593919 H3BRM9 83 aa9.33□□□□□ -0.92
VRK3-205ENST00000593919 FHL2Q14192 279 aa9.33□□□□□ -0.92
VRK3-205ENST00000593919 NAA38Q9BRA0 125 aaKnown RBP9.33□□□□□ -0.92
VRK3-205ENST00000593919 SPART-AS1P0CW21 52 aa9.32□□□□□ -0.92
VRK3-205ENST00000593919 DAD1P61803 113 aa9.32□□□□□ -0.92
VRK3-205ENST00000593919 PAPPA-AS1Q5QFB9 102 aa9.32□□□□□ -0.92
VRK3-205ENST00000593919 CEND1Q8N111 149 aa9.32□□□□□ -0.92
VRK3-205ENST00000593919 DNAJC30Q96LL9 226 aa9.32□□□□□ -0.92
VRK3-205ENST00000593919 VPS25Q9BRG1 176 aa9.32□□□□□ -0.92
VRK3-205ENST00000593919 TM2D3Q9BRN9 247 aa9.32□□□□□ -0.92
VRK3-205ENST00000593919 TRBV10-1A0A0K0K1A3 114 aa9.31□□□□□ -0.92
VRK3-205ENST00000593919 TRBV6-4A0A1B0GX49 114 aa9.31□□□□□ -0.92
VRK3-205ENST00000593919 C9orf118A6NHY6 69 aa9.31□□□□□ -0.92
VRK3-205ENST00000593919 HERVK_113P61574 105 aa9.31□□□□□ -0.92
VRK3-205ENST00000593919 TMEM170BQ5T4T1 132 aa9.31□□□□□ -0.92
VRK3-205ENST00000593919 SPATA25Q9BR10 227 aa9.31□□□□□ -0.92
VRK3-205ENST00000593919 C11orf68Q9H3H3 251 aaKnown RBP9.31□□□□□ -0.92
VRK3-205ENST00000593919 HUWE1Q7Z6Z7 4374 aaKnown RBP9.31□□□□□ -0.92
VRK3-205ENST00000593919 TRBV7-3A0A075B6L6 115 aa9.3□□□□□ -0.92
VRK3-205ENST00000593919 ZNF815PA8K554 130 aa9.3□□□□□ -0.92
VRK3-205ENST00000593919 H3BUT2 72 aa9.3□□□□□ -0.92
VRK3-205ENST00000593919 ZNRF2Q8NHG8 242 aa9.3□□□□□ -0.92
VRK3-205ENST00000593919 HIST1H4GQ99525 98 aa9.3□□□□□ -0.92
VRK3-205ENST00000593919 IGLV4-3A0A075B6K6 122 aa9.3□□□□□ -0.92
VRK3-205ENST00000593919 LOC100131303A0A0U1RQF7 123 aa9.3□□□□□ -0.92
VRK3-205ENST00000593919 SMIM13P0DJ93 91 aa9.3□□□□□ -0.92
VRK3-205ENST00000593919 IGHV3-38A0A0C4DH36 116 aa9.29□□□□□ -0.92
VRK3-205ENST00000593919 TEX48A0A1B0GUV7 120 aa9.29□□□□□ -0.92
VRK3-205ENST00000593919 K7ERJ3 54 aa9.29□□□□□ -0.92
VRK3-205ENST00000593919 RPL36AP83881 106 aaKnown RBP9.29□□□□□ -0.92
VRK3-205ENST00000593919 PHLDA1Q8WV24 401 aaPredicted RBP9.29□□□□□ -0.92
VRK3-205ENST00000593919 RPL36ALQ969Q0 106 aaKnown RBP9.29□□□□□ -0.92
VRK3-205ENST00000593919 NHP2Q9NX24 153 aaKnown RBP9.29□□□□□ -0.92
VRK3-205ENST00000593919 A0A0J9YWU9 116 aa9.28□□□□□ -0.92
VRK3-205ENST00000593919 GAGE12JA6NER3 117 aa9.28□□□□□ -0.92
VRK3-205ENST00000593919 TIRAPP58753 221 aa9.28□□□□□ -0.92
VRK3-205ENST00000593919 GAGE4Q13068 117 aa9.28□□□□□ -0.92
VRK3-205ENST00000593919 GAGE5Q13069 117 aa9.28□□□□□ -0.92
VRK3-205ENST00000593919 TAL2Q16559 108 aa9.28□□□□□ -0.92
VRK3-205ENST00000593919 GAGE13Q4V321 117 aa9.28□□□□□ -0.92
VRK3-205ENST00000593919 TM2D2Q9BX73 214 aa9.28□□□□□ -0.92
VRK3-205ENST00000593919 MEGF8Q7Z7M0 2845 aa9.28□□□□□ -0.92
VRK3-205ENST00000593919 ATP5G1P05496 136 aa9.28□□□□□ -0.92
VRK3-205ENST00000593919 CEMP1Q6PRD7 247 aaPredicted RBP9.28□□□□□ -0.92
VRK3-205ENST00000593919 PLEKHB2Q96CS7 222 aa9.28□□□□□ -0.92
VRK3-205ENST00000593919 PRKDCP78527 4128 aaKnown RBP9.27□□□□□ -0.92
VRK3-205ENST00000593919 STAB2Q8WWQ8 2551 aa9.27□□□□□ -0.92
VRK3-205ENST00000593919 CRYBA4P53673 196 aa9.27□□□□□ -0.93
VRK3-205ENST00000593919 UBE2D3P61077 147 aa9.27□□□□□ -0.93
VRK3-205ENST00000593919 UBE2D2P62837 147 aa9.27□□□□□ -0.93
VRK3-205ENST00000593919 C12orf74Q32Q52 190 aa9.27□□□□□ -0.93
VRK3-205ENST00000593919 SCGB1D4Q6XE38 83 aa9.27□□□□□ -0.93
VRK3-205ENST00000593919 PRO0255Q9UI72 69 aa9.27□□□□□ -0.93
VRK3-205ENST00000593919 DNAH9Q9NYC9 4486 aa9.26□□□□□ -0.93
VRK3-205ENST00000593919 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.26□□□□□ -0.93
VRK3-205ENST00000593919 A0A0J9YXV3 536 aa9.26□□□□□ -0.93
VRK3-205ENST00000593919 IGKV2-29A2NJV5 120 aaPredicted RBP9.26□□□□□ -0.93
VRK3-205ENST00000593919 TSPEAR-AS2P59090 65 aa9.26□□□□□ -0.93
VRK3-205ENST00000593919 RNASE13Q5GAN3 156 aaKnown RBP9.26□□□□□ -0.93
VRK3-205ENST00000593919 NFE4Q86UQ8 179 aa9.26□□□□□ -0.93
VRK3-205ENST00000593919 CHCHD7Q9BUK0 85 aa9.26□□□□□ -0.93
VRK3-205ENST00000593919 F5H768 121 aa9.25□□□□□ -0.93
VRK3-205ENST00000593919 HTN3P15516 51 aa9.25□□□□□ -0.93
VRK3-205ENST00000593919 PYGO1Q9Y3Y4 419 aa9.25□□□□□ -0.93
VRK3-205ENST00000593919 TMEM238C9JI98 176 aa9.24□□□□□ -0.93
VRK3-205ENST00000593919 LINC00694P0DN24 101 aa9.24□□□□□ -0.93
VRK3-205ENST00000593919 GYPEP15421 78 aa9.24□□□□□ -0.93
VRK3-205ENST00000593919 ZNF22P17026 224 aaPredicted RBP9.24□□□□□ -0.93
VRK3-205ENST00000593919 DAZ4Q86SG3 579 aaKnown RBP9.24□□□□□ -0.93
VRK3-205ENST00000593919 FAM104AQ969W3 186 aa9.24□□□□□ -0.93
VRK3-205ENST00000593919 DAZ3Q9NR90 486 aaKnown RBP9.24□□□□□ -0.93
VRK3-205ENST00000593919 IGHV3-64A0A075B6Q5 118 aa9.24□□□□□ -0.93
VRK3-205ENST00000593919 A0A0J9YY99 117 aa9.24□□□□□ -0.93
VRK3-205ENST00000593919 A0A1W2PPM0 123 aa9.24□□□□□ -0.93
VRK3-205ENST00000593919 K7ERU9 68 aa9.24□□□□□ -0.93
VRK3-205ENST00000593919 PAX4O43316 350 aa9.24□□□□□ -0.93
VRK3-205ENST00000593919 TNP2Q05952 138 aa9.24□□□□□ -0.93
VRK3-205ENST00000593919 Q6ZTC4 211 aa9.24□□□□□ -0.93
VRK3-205ENST00000593919 TMEM223A0PJW6 202 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms