RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 KLK12Q9UKR0 248 aa6.94□□□□□ -1.3
SDF2-208ENST00000589788 IGHV1-24A0A0C4DH33 117 aa6.93□□□□□ -1.3
SDF2-208ENST00000589788 TRBV6-5A0A0K0K1A5 114 aa6.93□□□□□ -1.3
SDF2-208ENST00000589788 NPYP01303 97 aa6.93□□□□□ -1.3
SDF2-208ENST00000589788 NTM-AS1Q6ZSK4 140 aa6.93□□□□□ -1.3
SDF2-208ENST00000589788 RPL39LQ96EH5 51 aaKnown RBP6.93□□□□□ -1.3
SDF2-208ENST00000589788 C20orf78Q9BR46 151 aa6.93□□□□□ -1.3
SDF2-208ENST00000589788 PRSS47A8MTI9 375 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 HIST1H2BKO60814 126 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 HIST1H2BJP06899 126 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 HIST1H2BOP23527 126 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 HIST1H2BBP33778 126 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 HIST1H2BDP58876 126 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 RAB5BP61020 215 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 HIST1H2BCP62807 126 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 HIST2H2BEQ16778 126 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.92□□□□□ -1.3
SDF2-208ENST00000589788 C18orf32Q8TCD1 76 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 HIST1H2BHQ93079 126 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 UBE2WQ96B02 151 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 HIST1H2BNQ99877 126 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 HIST1H2BMQ99879 126 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 MAP1LC3AQ9H492 121 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 COX11Q9Y6N1 276 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 BIRC6Q9NR09 4857 aa6.92□□□□□ -1.3
SDF2-208ENST00000589788 CRPP02741 224 aa6.91□□□□□ -1.3
SDF2-208ENST00000589788 ANGP03950 147 aaKnown RBP6.91□□□□□ -1.3
SDF2-208ENST00000589788 RPL32P62910 135 aaKnown RBP6.91□□□□□ -1.3
SDF2-208ENST00000589788 Q0VG73 95 aa6.91□□□□□ -1.3
SDF2-208ENST00000589788 GAGE6Q13070 117 aa6.91□□□□□ -1.3
SDF2-208ENST00000589788 COTL1Q14019 142 aa6.91□□□□□ -1.3
SDF2-208ENST00000589788 IQCJQ1A5X6 159 aa6.91□□□□□ -1.3
SDF2-208ENST00000589788 MPV17L2Q567V2 206 aa6.91□□□□□ -1.3
SDF2-208ENST00000589788 TMEM243Q9BU79 118 aa6.91□□□□□ -1.3
SDF2-208ENST00000589788 ST20Q9HBF5 79 aa6.91□□□□□ -1.3
SDF2-208ENST00000589788 IGKV2D-24A0A075B6R9 120 aa6.9□□□□□ -1.3
SDF2-208ENST00000589788 SDHAF1A6NFY7 115 aa6.9□□□□□ -1.3
SDF2-208ENST00000589788 AMTP48728 403 aa6.9□□□□□ -1.3
SDF2-208ENST00000589788 POLR2KP53803 58 aaKnown RBP6.9□□□□□ -1.3
SDF2-208ENST00000589788 Q8N1X5 172 aa6.9□□□□□ -1.3
SDF2-208ENST00000589788 Q8N976 141 aa6.9□□□□□ -1.3
SDF2-208ENST00000589788 DEFB104AQ8WTQ1 72 aa6.9□□□□□ -1.3
SDF2-208ENST00000589788 TMEM70Q9BUB7 260 aa6.9□□□□□ -1.3
SDF2-208ENST00000589788 SMIM2Q9BVW6 85 aa6.9□□□□□ -1.3
SDF2-208ENST00000589788 DNAH2Q9P225 4427 aa6.9□□□□□ -1.31
SDF2-208ENST00000589788 DNAH17Q9UFH2 4485 aa6.89□□□□□ -1.31
SDF2-208ENST00000589788 HECTD4Q9Y4D8 3996 aa6.89□□□□□ -1.31
SDF2-208ENST00000589788 TRBV27A0A0K0K1C4 114 aa6.89□□□□□ -1.31
SDF2-208ENST00000589788 LRCOL1A6NCL2 159 aa6.89□□□□□ -1.31
SDF2-208ENST00000589788 PRYO14603 147 aa6.89□□□□□ -1.31
SDF2-208ENST00000589788 UBE2L6O14933 153 aa6.89□□□□□ -1.31
SDF2-208ENST00000589788 PMCHP20382 165 aa6.89□□□□□ -1.31
SDF2-208ENST00000589788 FUSP35637 526 aaKnown RBP eCLIP6.89□□□□□ -1.31
SDF2-208ENST00000589788 RBX1P62877 108 aa6.89□□□□□ -1.31
SDF2-208ENST00000589788 NXT2Q9NPJ8 142 aaKnown RBP6.89□□□□□ -1.31
SDF2-208ENST00000589788 FAT2Q9NYQ8 4349 aa6.89□□□□□ -1.31
SDF2-208ENST00000589788 VCYO14598 125 aa6.88□□□□□ -1.31
SDF2-208ENST00000589788 Q8N8P6 123 aa6.88□□□□□ -1.31
SDF2-208ENST00000589788 NTN5Q8WTR8 489 aaPredicted RBP6.88□□□□□ -1.31
SDF2-208ENST00000589788 IGLV5-52A0A0A0MRZ9 124 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 LOC389332A0A1B0GUA5 103 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 LINC01546A6NGU7 62 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 I3L3M4 83 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 K7EMI3 77 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 LECT2O14960 151 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 CDK2AP2O75956 126 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 IFI27P40305 119 aaPredicted RBP6.87□□□□□ -1.31
SDF2-208ENST00000589788 MIAQ16674 131 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 COA6Q5JTJ3 125 aaKnown RBP6.87□□□□□ -1.31
SDF2-208ENST00000589788 CLPSL2Q6UWE3 100 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 BAGE3Q86Y29 109 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 LINC00269Q8N2A0 174 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 Q8N814 137 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 PRSS3P2Q8NHM4 247 aa6.87□□□□□ -1.31
SDF2-208ENST00000589788 TCAPO15273 167 aa6.86□□□□□ -1.31
SDF2-208ENST00000589788 LINC00614P0C842 121 aa6.86□□□□□ -1.31
SDF2-208ENST00000589788 AMMECR1LQ6DCA0 310 aa6.86□□□□□ -1.31
SDF2-208ENST00000589788 FA2HQ7L5A8 372 aa6.86□□□□□ -1.31
SDF2-208ENST00000589788 BAALCQ8WXS3 180 aa6.86□□□□□ -1.31
SDF2-208ENST00000589788 CHCHD1Q96BP2 118 aaKnown RBP6.86□□□□□ -1.31
SDF2-208ENST00000589788 URB1-AS1Q96HZ7 61 aa6.86□□□□□ -1.31
SDF2-208ENST00000589788 KIR2DL4Q99706 377 aa6.86□□□□□ -1.31
SDF2-208ENST00000589788 KRTAP4-2Q9BYR5 136 aa6.86□□□□□ -1.31
SDF2-208ENST00000589788 PKD1P98161 4303 aa6.86□□□□□ -1.31
SDF2-208ENST00000589788 A0A1B0GUV1 79 aa6.85□□□□□ -1.31
SDF2-208ENST00000589788 SERF1AO75920 110 aa6.85□□□□□ -1.31
SDF2-208ENST00000589788 TSHBP01222 138 aa6.85□□□□□ -1.31
SDF2-208ENST00000589788 S100A6P06703 90 aa6.85□□□□□ -1.31
SDF2-208ENST00000589788 NDUFA6P56556 154 aa6.85□□□□□ -1.31
SDF2-208ENST00000589788 REG3AQ06141 175 aa6.85□□□□□ -1.31
SDF2-208ENST00000589788 WFDC2Q14508 124 aa6.85□□□□□ -1.31
SDF2-208ENST00000589788 RNASEKQ6P5S7 137 aaKnown RBP6.85□□□□□ -1.31
SDF2-208ENST00000589788 MAPKAPK5-AS1Q8N8E1 139 aa6.85□□□□□ -1.31
SDF2-208ENST00000589788 PRR34Q9NV39 138 aa6.85□□□□□ -1.31
SDF2-208ENST00000589788 IGLV4-60A0A075B6I1 120 aa6.84□□□□□ -1.31
SDF2-208ENST00000589788 ESDP10768 282 aa6.84□□□□□ -1.31
SDF2-208ENST00000589788 PCP4P48539 62 aa6.84□□□□□ -1.31
SDF2-208ENST00000589788 ORMDL2Q53FV1 153 aa6.84□□□□□ -1.31
SDF2-208ENST00000589788 C20orf203Q8NBC4 194 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms