RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 FOXA3P55318 350 aaPredicted RBP5.38□□□□□ -1.55
DNMT1-219ENST00000589349 IQCJQ1A5X6 159 aa5.38□□□□□ -1.55
DNMT1-219ENST00000589349 SMIM29Q86T20 159 aa5.38□□□□□ -1.55
DNMT1-219ENST00000589349 RPL39LQ96EH5 51 aaKnown RBP5.38□□□□□ -1.55
DNMT1-219ENST00000589349 APCSP02743 223 aa5.37□□□□□ -1.55
DNMT1-219ENST00000589349 CFAP161Q6P656 301 aa5.37□□□□□ -1.55
DNMT1-219ENST00000589349 GATD1Q8NB37 220 aa5.37□□□□□ -1.55
DNMT1-219ENST00000589349 GTSF1Q8WW33 167 aa5.37□□□□□ -1.55
DNMT1-219ENST00000589349 BTF3L4Q96K17 158 aa5.37□□□□□ -1.55
DNMT1-219ENST00000589349 DNAH11Q96DT5 4516 aa5.37□□□□□ -1.55
DNMT1-219ENST00000589349 IGLV4-60A0A075B6I1 120 aa5.36□□□□□ -1.55
DNMT1-219ENST00000589349 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.36□□□□□ -1.55
DNMT1-219ENST00000589349 IGKV2-29A2NJV5 120 aaPredicted RBP5.36□□□□□ -1.55
DNMT1-219ENST00000589349 HIGD1CA8MV81 97 aa5.36□□□□□ -1.55
DNMT1-219ENST00000589349 ADIRFQ15847 76 aa5.36□□□□□ -1.55
DNMT1-219ENST00000589349 TMEM241Q24JQ0 296 aa5.36□□□□□ -1.55
DNMT1-219ENST00000589349 TEX261Q6UWH6 196 aa5.36□□□□□ -1.55
DNMT1-219ENST00000589349 TMEM101Q96IK0 257 aa5.36□□□□□ -1.55
DNMT1-219ENST00000589349 ST20Q9HBF5 79 aa5.36□□□□□ -1.55
DNMT1-219ENST00000589349 TRAV8-4A0A0B4J246 113 aa5.35□□□□□ -1.55
DNMT1-219ENST00000589349 A0A1B0GUT8 65 aa5.35□□□□□ -1.55
DNMT1-219ENST00000589349 FCER1GP30273 86 aa5.35□□□□□ -1.55
DNMT1-219ENST00000589349 CAMPP49913 170 aa5.35□□□□□ -1.55
DNMT1-219ENST00000589349 RIGQ13278 110 aa5.35□□□□□ -1.55
DNMT1-219ENST00000589349 PEA15Q15121 130 aa5.35□□□□□ -1.55
DNMT1-219ENST00000589349 FAM231DQ6ZW35 169 aa5.35□□□□□ -1.55
DNMT1-219ENST00000589349 LINC01551Q86U37 167 aa5.35□□□□□ -1.55
DNMT1-219ENST00000589349 TSKUQ8WUA8 353 aa5.35□□□□□ -1.55
DNMT1-219ENST00000589349 FAM210AQ96ND0 272 aa5.35□□□□□ -1.55
DNMT1-219ENST00000589349 SDHAF1A6NFY7 115 aa5.34□□□□□ -1.55
DNMT1-219ENST00000589349 I3L3M4 83 aa5.34□□□□□ -1.55
DNMT1-219ENST00000589349 PRSS1P07477 247 aa5.34□□□□□ -1.55
DNMT1-219ENST00000589349 SRP19P09132 144 aaKnown RBP5.34□□□□□ -1.55
DNMT1-219ENST00000589349 SCXQ7RTU7 201 aa5.34□□□□□ -1.55
DNMT1-219ENST00000589349 C20orf203Q8NBC4 194 aa5.34□□□□□ -1.55
DNMT1-219ENST00000589349 CHAC1Q9BUX1 264 aa5.34□□□□□ -1.55
DNMT1-219ENST00000589349 DYNC1H1Q14204 4646 aaKnown RBP5.33□□□□□ -1.56
DNMT1-219ENST00000589349 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.33□□□□□ -1.56
DNMT1-219ENST00000589349 SMKR1H3BMG3 65 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 NCR2O95944 276 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 FGF6P10767 208 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 HIGD2BQ4VC39 106 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 FAM74A3Q4VXF1 159 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 AMN1Q8IY45 258 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 OR5A1Q8NGJ0 315 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 LYPD6BQ8NI32 183 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 MRAP2Q96G30 205 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 CNFNQ9BYD5 112 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 GFRA4Q9GZZ7 299 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 OSTCQ9NRP0 149 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 PRR34Q9NV39 138 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 TMEM242Q9NWH2 141 aa5.33□□□□□ -1.56
DNMT1-219ENST00000589349 XCL1P47992 114 aa5.32□□□□□ -1.56
DNMT1-219ENST00000589349 CIRBP-AS1Q8TBR5 109 aa5.32□□□□□ -1.56
DNMT1-219ENST00000589349 NAT8Q9UHE5 227 aa5.32□□□□□ -1.56
DNMT1-219ENST00000589349 NAT8BQ9UHF3 227 aa5.32□□□□□ -1.56
DNMT1-219ENST00000589349 LRP1BQ9NZR2 4599 aa5.31□□□□□ -1.56
DNMT1-219ENST00000589349 IGHV3-64A0A075B6Q5 118 aa5.31□□□□□ -1.56
DNMT1-219ENST00000589349 GAS8-AS1O95177 125 aa5.31□□□□□ -1.56
DNMT1-219ENST00000589349 RAB4AP20338 218 aa5.31□□□□□ -1.56
DNMT1-219ENST00000589349 RAB14P61106 215 aa5.31□□□□□ -1.56
DNMT1-219ENST00000589349 RPL23P62829 140 aaKnown RBP5.31□□□□□ -1.56
DNMT1-219ENST00000589349 SS18Q15532 418 aa5.31□□□□□ -1.56
DNMT1-219ENST00000589349 NUP35Q8NFH5 326 aa5.31□□□□□ -1.56
DNMT1-219ENST00000589349 CHCHD10Q8WYQ3 142 aaPredicted RBP5.31□□□□□ -1.56
DNMT1-219ENST00000589349 ISOC2Q96AB3 205 aa5.31□□□□□ -1.56
DNMT1-219ENST00000589349 TMEM191AQ9H0A3 160 aa5.31□□□□□ -1.56
DNMT1-219ENST00000589349 HSPG2P98160 4391 aa5.3□□□□□ -1.56
DNMT1-219ENST00000589349 H7C423 109 aa5.3□□□□□ -1.56
DNMT1-219ENST00000589349 PPP1R17O96001 155 aa5.3□□□□□ -1.56
DNMT1-219ENST00000589349 CKS2P33552 79 aa5.3□□□□□ -1.56
DNMT1-219ENST00000589349 RPL37AP61513 92 aaKnown RBP5.3□□□□□ -1.56
DNMT1-219ENST00000589349 MRPL54Q6P161 138 aaKnown RBP5.3□□□□□ -1.56
DNMT1-219ENST00000589349 Q6ZSA8 131 aa5.3□□□□□ -1.56
DNMT1-219ENST00000589349 KIR2DL4Q99706 377 aa5.3□□□□□ -1.56
DNMT1-219ENST00000589349 V9GYV3 84 aa5.3□□□□□ -1.56
DNMT1-219ENST00000589349 IGKV2-24A0A0C4DH68 120 aa5.29□□□□□ -1.56
DNMT1-219ENST00000589349 C7orf77A4D0Y5 90 aa5.29□□□□□ -1.56
DNMT1-219ENST00000589349 FAM231BA6NCW3 169 aa5.29□□□□□ -1.56
DNMT1-219ENST00000589349 C9JQL5 133 aa5.29□□□□□ -1.56
DNMT1-219ENST00000589349 F8W036 122 aa5.29□□□□□ -1.56
DNMT1-219ENST00000589349 CCL25O15444 150 aa5.29□□□□□ -1.56
DNMT1-219ENST00000589349 TSHBP01222 138 aa5.29□□□□□ -1.56
DNMT1-219ENST00000589349 ZNF25P17030 456 aaPredicted RBP5.29□□□□□ -1.56
DNMT1-219ENST00000589349 RPS10P46783 165 aaKnown RBP5.29□□□□□ -1.56
DNMT1-219ENST00000589349 SMAGPQ0VAQ4 97 aa5.29□□□□□ -1.56
DNMT1-219ENST00000589349 C9orf163Q8N9P6 203 aa5.29□□□□□ -1.56
DNMT1-219ENST00000589349 RNF185Q96GF1 192 aa5.29□□□□□ -1.56
DNMT1-219ENST00000589349 DNAH5Q8TE73 4624 aa5.28□□□□□ -1.56
DNMT1-219ENST00000589349 TRBV6-5A0A0K0K1A5 114 aa5.28□□□□□ -1.56
DNMT1-219ENST00000589349 S100A8P05109 93 aa5.28□□□□□ -1.56
DNMT1-219ENST00000589349 MAJINQ3KP22 176 aa5.28□□□□□ -1.56
DNMT1-219ENST00000589349 RNASE13Q5GAN3 156 aaKnown RBP5.28□□□□□ -1.56
DNMT1-219ENST00000589349 KRTAP26-1Q6PEX3 210 aa5.28□□□□□ -1.56
DNMT1-219ENST00000589349 TRAV13-1A0A0B4J241 112 aa5.27□□□□□ -1.57
DNMT1-219ENST00000589349 LINC00959A0A1B0GUT2 108 aa5.27□□□□□ -1.57
DNMT1-219ENST00000589349 PPP1R2P9O14990 202 aa5.27□□□□□ -1.57
DNMT1-219ENST00000589349 NDUFS6O75380 124 aaKnown RBP5.27□□□□□ -1.57
DNMT1-219ENST00000589349 CHTF8P0CG12 524 aa5.27□□□□□ -1.57
DNMT1-219ENST00000589349 COX6A2Q02221 97 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms