RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 TEX48A0A1B0GUV7 120 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 C7orf71A4D174 169 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 K7EIL1 84 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 CRXO43186 299 aaPredicted RBP2.31□□□□□ -2.04
ZNF540-207ENST00000589285 HLA-DRB4P13762 266 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 ZNF56Q15929 161 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 PMCHL1Q16048 86 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 RRN3P1Q2M238 152 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 AMN1Q8IY45 258 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 FMC1Q96HJ9 113 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 HLA-DRB4X5D2U9 266 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 LTAP01374 205 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 ZFAND6Q6FIF0 208 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 FOXI2Q6ZQN5 318 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 C1orf158Q8N1D5 194 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 NUP35Q8NFH5 326 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 A0A087WZ39 114 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 TRAV21A0A0B4J279 112 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 LOC100131303A0A0U1RQF7 123 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 RPL37AP8A6NKH3 93 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 F2Z2F3 143 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 GIG44P09565 113 aaPredicted RBP2.31□□□□□ -2.04
ZNF540-207ENST00000589285 UFSP1Q6NVU6 142 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 AMTNQ6UX39 209 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 RPP21Q9H633 154 aaKnown RBP2.31□□□□□ -2.04
ZNF540-207ENST00000589285 CELA1Q9UNI1 258 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 PKIGQ9Y2B9 76 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 V9GYV3 84 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 IGHV1OR15-1A0A075B7D0 117 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 TRAV8-6A0A0B4J262 113 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 J3KT08 172 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 INSP01308 110 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 ASIPP42127 132 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 NDUFV3P56181 108 aaKnown RBP2.3□□□□□ -2.04
ZNF540-207ENST00000589285 TMEM97Q5BJF2 176 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 FAM222AQ5U5X8 452 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 RASL11AQ6T310 242 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 Q8N377 158 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 OR5A1Q8NGJ0 315 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 PRO0628Q9UI54 55 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 A0A087X0K7 114 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 LOC107984640A0A0U1RRK4 108 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 A8MWL6 223 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 C9JAW5 83 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 CCDC179H3BU77 68 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 DUSP14O95147 198 aaKnown RBP2.3□□□□□ -2.04
ZNF540-207ENST00000589285 Q0VG73 95 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 C4orf26Q17RF5 130 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 RNASE13Q5GAN3 156 aaKnown RBP2.3□□□□□ -2.04
ZNF540-207ENST00000589285 MEIG1Q5JSS6 88 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 KPRPQ5T749 579 aaPredicted RBP2.3□□□□□ -2.04
ZNF540-207ENST00000589285 LYPD1Q8N2G4 141 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 FAM19A2Q8N3H0 131 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 WFDC9Q8NEX5 89 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 C11orf52Q96A22 123 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 RPL39LQ96EH5 51 aaKnown RBP2.3□□□□□ -2.04
ZNF540-207ENST00000589285 TRAPPC1Q9Y5R8 145 aa2.3□□□□□ -2.04
ZNF540-207ENST00000589285 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 SERF1AO75920 110 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 RNASE3P12724 160 aaKnown RBP2.29□□□□□ -2.04
ZNF540-207ENST00000589285 KLK9Q2XQG4 91 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 OR2K2Q8NGT1 345 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 BORCS7Q96B45 105 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 TMEM101Q96IK0 257 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 PRKDCP78527 4128 aaKnown RBP2.29□□□□□ -2.04
ZNF540-207ENST00000589285 TRGV4A0A0C4DH28 118 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 A0A1B0GUT8 65 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 K7EP34 96 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 ZNF253O75346 499 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 ZNF324O75467 553 aaPredicted RBP2.29□□□□□ -2.04
ZNF540-207ENST00000589285 LINC00694P0DN24 101 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 SRIP30626 198 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 INSL3P51460 131 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 TAL2Q16559 108 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 MPV17L2Q567V2 206 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 BVES-AS1Q5T3Y7 98 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 CLPSL2Q6UWE3 100 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 C18orf15Q96N68 181 aa2.29□□□□□ -2.04
ZNF540-207ENST00000589285 FAM231BA6NCW3 169 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 D6R8Y8 96 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 CKS2P33552 79 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 TSKUQ8WUA8 353 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 PMCHL2Q9BQD1 86 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 IL36BQ9NZH7 164 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 TRAV9-1A0A075B6T8 112 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 C19orf71A6NCJ1 209 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 KLLNB2CW77 178 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 IGLL5B9A064 214 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 ATP5LO75964 103 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 MT-ATP8P03928 68 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 LEPP41159 167 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 KRTDAPP60985 99 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 DAD1P61803 113 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 TTC32Q5I0X7 151 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 CEMP1Q6PRD7 247 aaPredicted RBP2.28□□□□□ -2.04
ZNF540-207ENST00000589285 KCNS1Q96KK3 526 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 LYSTQ99698 3801 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 TXNDC17Q9BRA2 123 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 EDA2RQ9HAV5 297 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms