RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SPANXA1Q9NS26 97 aa13.14□□□□□ -0.31
CIRBP-220ENST00000588917 TRAV8-4A0A0B4J246 113 aa13.13□□□□□ -0.31
CIRBP-220ENST00000588917 LINC01546A6NGU7 62 aa13.13□□□□□ -0.31
CIRBP-220ENST00000588917 RTL8CO15255 209 aa13.13□□□□□ -0.31
CIRBP-220ENST00000588917 ENHOQ6UWT2 76 aa13.13□□□□□ -0.31
CIRBP-220ENST00000588917 CYSLTR1Q9Y271 337 aa13.13□□□□□ -0.31
CIRBP-220ENST00000588917 UBE2D4Q9Y2X8 147 aa13.13□□□□□ -0.31
CIRBP-220ENST00000588917 HECTD4Q9Y4D8 3996 aa13.12□□□□□ -0.31
CIRBP-220ENST00000588917 PSCAO43653 123 aa13.12□□□□□ -0.31
CIRBP-220ENST00000588917 LINC00614P0C842 121 aa13.12□□□□□ -0.31
CIRBP-220ENST00000588917 ZNF664Q8N3J9 261 aa13.12□□□□□ -0.31
CIRBP-220ENST00000588917 CDC42SE2Q9NRR3 84 aa13.12□□□□□ -0.31
CIRBP-220ENST00000588917 C1orf43Q9BWL3 253 aa13.11□□□□□ -0.31
CIRBP-220ENST00000588917 AP5S1Q9NUS5 200 aa13.11□□□□□ -0.31
CIRBP-220ENST00000588917 PYGO1Q9Y3Y4 419 aa13.11□□□□□ -0.31
CIRBP-220ENST00000588917 DNAH2Q9P225 4427 aa13.1□□□□□ -0.31
CIRBP-220ENST00000588917 RPL39P62891 51 aaKnown RBP13.1□□□□□ -0.31
CIRBP-220ENST00000588917 C2orf66Q6UXQ4 117 aa13.1□□□□□ -0.31
CIRBP-220ENST00000588917 Q6ZRN7 208 aaPredicted RBP13.1□□□□□ -0.31
CIRBP-220ENST00000588917 IGKV2D-24A0A075B6R9 120 aa13.09□□□□□ -0.31
CIRBP-220ENST00000588917 PRSS29PA6NIE9 313 aa13.09□□□□□ -0.31
CIRBP-220ENST00000588917 NPSP0C0P6 89 aa13.09□□□□□ -0.31
CIRBP-220ENST00000588917 CCL25O15444 150 aa13.08□□□□□ -0.32
CIRBP-220ENST00000588917 MRPS36P82909 103 aaKnown RBP13.08□□□□□ -0.32
CIRBP-220ENST00000588917 CLPSL2Q6UWE3 100 aa13.07□□□□□ -0.32
CIRBP-220ENST00000588917 TOMM6Q96B49 74 aa13.07□□□□□ -0.32
CIRBP-220ENST00000588917 EREGO14944 169 aa13.06□□□□□ -0.32
CIRBP-220ENST00000588917 PAPPA-AS1Q5QFB9 102 aa13.06□□□□□ -0.32
CIRBP-220ENST00000588917 BAGE3Q86Y29 109 aa13.06□□□□□ -0.32
CIRBP-220ENST00000588917 CHCHD1Q96BP2 118 aaKnown RBP13.06□□□□□ -0.32
CIRBP-220ENST00000588917 SS18Q15532 418 aa13.05□□□□□ -0.32
CIRBP-220ENST00000588917 KIAA1109Q2LD37 5005 aa13.04□□□□□ -0.32
CIRBP-220ENST00000588917 IGKV3OR2-268A0A0C4DH90 116 aa13.04□□□□□ -0.32
CIRBP-220ENST00000588917 Q6ZN92 141 aa13.04□□□□□ -0.32
CIRBP-220ENST00000588917 ERASQ7Z444 233 aa13.04□□□□□ -0.32
CIRBP-220ENST00000588917 PCLOQ9Y6V0 5065 aa13.03□□□□□ -0.32
CIRBP-220ENST00000588917 LINC00959A0A1B0GUT2 108 aa13.03□□□□□ -0.32
CIRBP-220ENST00000588917 C1orf196B1AJZ1 125 aa13.03□□□□□ -0.32
CIRBP-220ENST00000588917 TNP2Q05952 138 aa13.03□□□□□ -0.32
CIRBP-220ENST00000588917 URB1-AS1Q96HZ7 61 aa13.03□□□□□ -0.32
CIRBP-220ENST00000588917 TMEM141Q96I45 108 aa13.03□□□□□ -0.32
CIRBP-220ENST00000588917 SCGB3A1Q96QR1 104 aa13.03□□□□□ -0.32
CIRBP-220ENST00000588917 TIMM17AQ99595 171 aa13.03□□□□□ -0.32
CIRBP-220ENST00000588917 IGLV10-54A0A075B6I4 117 aa13.02□□□□□ -0.33
CIRBP-220ENST00000588917 IGIPA6NJ69 53 aa13.02□□□□□ -0.33
CIRBP-220ENST00000588917 VCX2Q9H322 139 aa13.02□□□□□ -0.33
CIRBP-220ENST00000588917 TEX43Q6ZNM6 134 aa13.01□□□□□ -0.33
CIRBP-220ENST00000588917 Q6ZUT4 128 aa13.01□□□□□ -0.33
CIRBP-220ENST00000588917 IGLV4-3A0A075B6K6 122 aa13□□□□□ -0.33
CIRBP-220ENST00000588917 HBDP02042 147 aa13□□□□□ -0.33
CIRBP-220ENST00000588917 CHCHD10Q8WYQ3 142 aaPredicted RBP13□□□□□ -0.33
CIRBP-220ENST00000588917 OPRPNQ99935 248 aaPredicted RBP13□□□□□ -0.33
CIRBP-220ENST00000588917 C2orf88Q9BSF0 95 aa13□□□□□ -0.33
CIRBP-220ENST00000588917 A0A087WTM6 91 aa12.99□□□□□ -0.33
CIRBP-220ENST00000588917 HSBP1O75506 76 aa12.99□□□□□ -0.33
CIRBP-220ENST00000588917 DNAH17Q9UFH2 4485 aa12.98□□□□□ -0.33
CIRBP-220ENST00000588917 TRAV13-1A0A0B4J241 112 aa12.98□□□□□ -0.33
CIRBP-220ENST00000588917 IFITM10A6NMD0 228 aa12.98□□□□□ -0.33
CIRBP-220ENST00000588917 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.98□□□□□ -0.33
CIRBP-220ENST00000588917 RNASE13Q5GAN3 156 aaKnown RBP12.98□□□□□ -0.33
CIRBP-220ENST00000588917 KRTAP26-1Q6PEX3 210 aa12.98□□□□□ -0.33
CIRBP-220ENST00000588917 FAM104AQ969W3 186 aa12.98□□□□□ -0.33
CIRBP-220ENST00000588917 A0A1B0GVY2 172 aa12.97□□□□□ -0.33
CIRBP-220ENST00000588917 LRCOL1A6NCL2 159 aa12.97□□□□□ -0.33
CIRBP-220ENST00000588917 GAGE12HA6NDE8 117 aa12.97□□□□□ -0.33
CIRBP-220ENST00000588917 CD164L2Q6UWJ8 174 aa12.97□□□□□ -0.33
CIRBP-220ENST00000588917 MAPKAPK5-AS1Q8N8E1 139 aa12.97□□□□□ -0.33
CIRBP-220ENST00000588917 AMELXQ99217 191 aa12.97□□□□□ -0.33
CIRBP-220ENST00000588917 C14orf177Q52M58 125 aa12.96□□□□□ -0.33
CIRBP-220ENST00000588917 CFAP161Q6P656 301 aa12.96□□□□□ -0.33
CIRBP-220ENST00000588917 BAALCQ8WXS3 180 aa12.96□□□□□ -0.33
CIRBP-220ENST00000588917 HIST1H2BKO60814 126 aa12.95□□□□□ -0.34
CIRBP-220ENST00000588917 ATP5LO75964 103 aa12.95□□□□□ -0.34
CIRBP-220ENST00000588917 HIST1H2BJP06899 126 aa12.95□□□□□ -0.34
CIRBP-220ENST00000588917 HIST1H2BOP23527 126 aa12.95□□□□□ -0.34
CIRBP-220ENST00000588917 HIST1H2BBP33778 126 aa12.95□□□□□ -0.34
CIRBP-220ENST00000588917 XCL1P47992 114 aa12.95□□□□□ -0.34
CIRBP-220ENST00000588917 HIST1H2BDP58876 126 aa12.95□□□□□ -0.34
CIRBP-220ENST00000588917 HIST1H2BCP62807 126 aa12.95□□□□□ -0.34
CIRBP-220ENST00000588917 HIST2H2BEQ16778 126 aa12.95□□□□□ -0.34
CIRBP-220ENST00000588917 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.95□□□□□ -0.34
CIRBP-220ENST00000588917 HIST1H2BHQ93079 126 aa12.95□□□□□ -0.34
CIRBP-220ENST00000588917 HIST1H2BNQ99877 126 aa12.95□□□□□ -0.34
CIRBP-220ENST00000588917 HIST1H2BMQ99879 126 aa12.95□□□□□ -0.34
CIRBP-220ENST00000588917 A0A096LNJ9 63 aa12.94□□□□□ -0.34
CIRBP-220ENST00000588917 PDZD11Q5EBL8 140 aa12.94□□□□□ -0.34
CIRBP-220ENST00000588917 PGPEP1Q9NXJ5 209 aa12.94□□□□□ -0.34
CIRBP-220ENST00000588917 SERF1AO75920 110 aa12.93□□□□□ -0.34
CIRBP-220ENST00000588917 SEC11AP67812 179 aa12.93□□□□□ -0.34
CIRBP-220ENST00000588917 PMCHL1Q16048 86 aa12.93□□□□□ -0.34
CIRBP-220ENST00000588917 FAT2Q9NYQ8 4349 aa12.93□□□□□ -0.34
CIRBP-220ENST00000588917 FOXI1Q12951 378 aa12.92□□□□□ -0.34
CIRBP-220ENST00000588917 Q8N814 137 aa12.92□□□□□ -0.34
CIRBP-220ENST00000588917 UBE2D1P51668 147 aa12.91□□□□□ -0.34
CIRBP-220ENST00000588917 PMVKQ15126 192 aa12.91□□□□□ -0.34
CIRBP-220ENST00000588917 PKHD1P08F94 4074 aa12.91□□□□□ -0.34
CIRBP-220ENST00000588917 USP17L23D6RBM5 183 aa12.9□□□□□ -0.34
CIRBP-220ENST00000588917 COX7A2LO14548 114 aa12.9□□□□□ -0.34
CIRBP-220ENST00000588917 LINC00173Q6ZV60 143 aa12.9□□□□□ -0.34
CIRBP-220ENST00000588917 NTN5Q8WTR8 489 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms