RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 S100A12P80511 92 aa13.79□□□□□ -0.2
ATG4D-208ENST00000588667 LINC01545Q5VT33 79 aa13.79□□□□□ -0.2
ATG4D-208ENST00000588667 Q6ZR54 194 aa13.79□□□□□ -0.2
ATG4D-208ENST00000588667 TIMM17AQ99595 171 aa13.79□□□□□ -0.2
ATG4D-208ENST00000588667 CHCHD7Q9BUK0 85 aa13.79□□□□□ -0.2
ATG4D-208ENST00000588667 IGIPA6NJ69 53 aa13.78□□□□□ -0.2
ATG4D-208ENST00000588667 CDPF1Q6NVV7 123 aa13.78□□□□□ -0.2
ATG4D-208ENST00000588667 NBDYA0A0U1RRE5 68 aa13.77□□□□□ -0.21
ATG4D-208ENST00000588667 SIVA1O15304 175 aa13.77□□□□□ -0.21
ATG4D-208ENST00000588667 TMEM97Q5BJF2 176 aa13.77□□□□□ -0.21
ATG4D-208ENST00000588667 TTC32Q5I0X7 151 aa13.75□□□□□ -0.21
ATG4D-208ENST00000588667 TEX43Q6ZNM6 134 aa13.75□□□□□ -0.21
ATG4D-208ENST00000588667 LELP1Q5T871 98 aa13.75□□□□□ -0.21
ATG4D-208ENST00000588667 NTM-AS1Q6ZSK4 140 aa13.75□□□□□ -0.21
ATG4D-208ENST00000588667 WFDC10BQ8IUB3 73 aa13.75□□□□□ -0.21
ATG4D-208ENST00000588667 PYGO1Q9Y3Y4 419 aa13.75□□□□□ -0.21
ATG4D-208ENST00000588667 SPANXA1Q9NS26 97 aa13.74□□□□□ -0.21
ATG4D-208ENST00000588667 TRBV25-1A0A075B6N4 114 aa13.73□□□□□ -0.21
ATG4D-208ENST00000588667 TRAV12-1A0A0B4J245 112 aa13.73□□□□□ -0.21
ATG4D-208ENST00000588667 NPSP0C0P6 89 aa13.73□□□□□ -0.21
ATG4D-208ENST00000588667 SMAGPQ0VAQ4 97 aa13.73□□□□□ -0.21
ATG4D-208ENST00000588667 PAPPA-AS1Q5QFB9 102 aa13.73□□□□□ -0.21
ATG4D-208ENST00000588667 BAALCQ8WXS3 180 aa13.73□□□□□ -0.21
ATG4D-208ENST00000588667 DNAH10Q8IVF4 4471 aa13.73□□□□□ -0.21
ATG4D-208ENST00000588667 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.72□□□□□ -0.21
ATG4D-208ENST00000588667 TRAV8-6A0A0B4J262 113 aa13.72□□□□□ -0.21
ATG4D-208ENST00000588667 IGKV2-29A2NJV5 120 aaPredicted RBP13.72□□□□□ -0.21
ATG4D-208ENST00000588667 TMEM243Q9BU79 118 aa13.72□□□□□ -0.21
ATG4D-208ENST00000588667 VAMP8Q9BV40 100 aa13.72□□□□□ -0.21
ATG4D-208ENST00000588667 DNAH2Q9P225 4427 aa13.72□□□□□ -0.21
ATG4D-208ENST00000588667 FRAS1Q86XX4 4008 aa13.72□□□□□ -0.21
ATG4D-208ENST00000588667 TRBV6-8A0A0A6YYG3 113 aa13.72□□□□□ -0.21
ATG4D-208ENST00000588667 ODF1Q14990 250 aa13.72□□□□□ -0.21
ATG4D-208ENST00000588667 PMCHL2Q9BQD1 86 aa13.72□□□□□ -0.21
ATG4D-208ENST00000588667 UBE2D4Q9Y2X8 147 aa13.72□□□□□ -0.21
ATG4D-208ENST00000588667 A0A087WX48 190 aa13.71□□□□□ -0.22
ATG4D-208ENST00000588667 DNAH10OSP0CZ25 163 aa13.71□□□□□ -0.22
ATG4D-208ENST00000588667 ATOH7Q8N100 152 aa13.71□□□□□ -0.22
ATG4D-208ENST00000588667 TIMM21Q9BVV7 248 aa13.71□□□□□ -0.22
ATG4D-208ENST00000588667 KRTAP1-5Q9BYS1 174 aa13.71□□□□□ -0.22
ATG4D-208ENST00000588667 H7C423 109 aa13.7□□□□□ -0.22
ATG4D-208ENST00000588667 UBE2L6O14933 153 aa13.7□□□□□ -0.22
ATG4D-208ENST00000588667 PMVKQ15126 192 aa13.7□□□□□ -0.22
ATG4D-208ENST00000588667 IGLV4-3A0A075B6K6 122 aa13.68□□□□□ -0.22
ATG4D-208ENST00000588667 TRAV9-2A0A087WT02 112 aa13.68□□□□□ -0.22
ATG4D-208ENST00000588667 K7EP13 123 aa13.68□□□□□ -0.22
ATG4D-208ENST00000588667 C1orf134Q5TEV5 83 aa13.68□□□□□ -0.22
ATG4D-208ENST00000588667 CHTOPQ9Y3Y2 248 aaKnown RBP13.68□□□□□ -0.22
ATG4D-208ENST00000588667 PRSS29PA6NIE9 313 aa13.68□□□□□ -0.22
ATG4D-208ENST00000588667 F8VRH5 84 aa13.68□□□□□ -0.22
ATG4D-208ENST00000588667 LINC01556Q5JQF7 62 aa13.68□□□□□ -0.22
ATG4D-208ENST00000588667 DGAT2L7PQ6IED9 249 aa13.68□□□□□ -0.22
ATG4D-208ENST00000588667 MRPL52Q86TS9 123 aaKnown RBP13.68□□□□□ -0.22
ATG4D-208ENST00000588667 VCX2Q9H322 139 aa13.68□□□□□ -0.22
ATG4D-208ENST00000588667 CST9LQ9H4G1 147 aa13.68□□□□□ -0.22
ATG4D-208ENST00000588667 HSBP1L1C9JCN9 74 aa13.67□□□□□ -0.22
ATG4D-208ENST00000588667 DPM2O94777 84 aa13.67□□□□□ -0.22
ATG4D-208ENST00000588667 FGF6P10767 208 aa13.67□□□□□ -0.22
ATG4D-208ENST00000588667 PLNP26678 52 aa13.67□□□□□ -0.22
ATG4D-208ENST00000588667 OPRPNQ99935 248 aaPredicted RBP13.67□□□□□ -0.22
ATG4D-208ENST00000588667 MRPL35Q9NZE8 188 aaKnown RBP13.67□□□□□ -0.22
ATG4D-208ENST00000588667 PAM16Q9Y3D7 125 aa13.67□□□□□ -0.22
ATG4D-208ENST00000588667 CSDC2Q9Y534 153 aaKnown RBP13.67□□□□□ -0.22
ATG4D-208ENST00000588667 IGKCP01834 107 aa13.66□□□□□ -0.22
ATG4D-208ENST00000588667 AMMECR1LQ6DCA0 310 aa13.66□□□□□ -0.22
ATG4D-208ENST00000588667 C6orf223Q8N319 242 aa13.66□□□□□ -0.22
ATG4D-208ENST00000588667 MRPS36P82909 103 aaKnown RBP13.65□□□□□ -0.22
ATG4D-208ENST00000588667 CHCHD5Q9BSY4 110 aa13.65□□□□□ -0.22
ATG4D-208ENST00000588667 RTL8CO15255 209 aa13.64□□□□□ -0.23
ATG4D-208ENST00000588667 ZNF664Q8N3J9 261 aa13.64□□□□□ -0.23
ATG4D-208ENST00000588667 C10orf126Q8N4M7 172 aa13.64□□□□□ -0.23
ATG4D-208ENST00000588667 ZNF25P17030 456 aaPredicted RBP13.64□□□□□ -0.23
ATG4D-208ENST00000588667 LINC00336Q6ZUF6 198 aa13.64□□□□□ -0.23
ATG4D-208ENST00000588667 TMEM101Q96IK0 257 aa13.64□□□□□ -0.23
ATG4D-208ENST00000588667 AMELXQ99217 191 aa13.64□□□□□ -0.23
ATG4D-208ENST00000588667 SPATA45Q537H7 98 aa13.63□□□□□ -0.23
ATG4D-208ENST00000588667 OR5A1Q8NGJ0 315 aa13.63□□□□□ -0.23
ATG4D-208ENST00000588667 FAT2Q9NYQ8 4349 aa13.62□□□□□ -0.23
ATG4D-208ENST00000588667 TSTD3H0UI37 97 aa13.62□□□□□ -0.23
ATG4D-208ENST00000588667 PKIAP61925 76 aa13.62□□□□□ -0.23
ATG4D-208ENST00000588667 MAJINQ3KP22 176 aa13.62□□□□□ -0.23
ATG4D-208ENST00000588667 ZC2HC1BQ5TFG8 222 aa13.62□□□□□ -0.23
ATG4D-208ENST00000588667 Q6ZUT4 128 aa13.62□□□□□ -0.23
ATG4D-208ENST00000588667 FAM104AQ969W3 186 aa13.62□□□□□ -0.23
ATG4D-208ENST00000588667 C2orf88Q9BSF0 95 aa13.62□□□□□ -0.23
ATG4D-208ENST00000588667 hDV102S1A0JD36 115 aa13.61□□□□□ -0.23
ATG4D-208ENST00000588667 GAGE6Q13070 117 aa13.61□□□□□ -0.23
ATG4D-208ENST00000588667 DNAH17Q9UFH2 4485 aa13.61□□□□□ -0.23
ATG4D-208ENST00000588667 IGHV3-30P01768 117 aa13.61□□□□□ -0.23
ATG4D-208ENST00000588667 IGHV3-33P01772 117 aa13.61□□□□□ -0.23
ATG4D-208ENST00000588667 IGHV3-30-3P0DP02 117 aa13.61□□□□□ -0.23
ATG4D-208ENST00000588667 IGHV3-30-5P0DP03 117 aa13.61□□□□□ -0.23
ATG4D-208ENST00000588667 IGLV4-69A0A075B6H9 119 aa13.59□□□□□ -0.23
ATG4D-208ENST00000588667 RNASE13Q5GAN3 156 aaKnown RBP13.59□□□□□ -0.23
ATG4D-208ENST00000588667 PRO1933Q9H354 126 aa13.59□□□□□ -0.23
ATG4D-208ENST00000588667 CDC42SE2Q9NRR3 84 aa13.59□□□□□ -0.23
ATG4D-208ENST00000588667 Q8N3U1 123 aa13.58□□□□□ -0.24
ATG4D-208ENST00000588667 IBA57-AS1B1ANH7 110 aa13.57□□□□□ -0.24
ATG4D-208ENST00000588667 TMEM262E9PQX1 116 aa13.57□□□□□ -0.24
ATG4D-208ENST00000588667 NFE4Q86UQ8 179 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms