RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 FGF6P10767 208 aa14.28□□□□□ -0.12
ATG4D-204ENST00000586417 PAPPA-AS1Q5QFB9 102 aa14.28□□□□□ -0.12
ATG4D-204ENST00000586417 VCX2Q9H322 139 aa14.28□□□□□ -0.12
ATG4D-204ENST00000586417 C11orf86A6NJI1 115 aa14.27□□□□□ -0.12
ATG4D-204ENST00000586417 ATP5G1P05496 136 aa14.27□□□□□ -0.12
ATG4D-204ENST00000586417 GYPEP15421 78 aa14.27□□□□□ -0.12
ATG4D-204ENST00000586417 HNRNPA3P51991 378 aaKnown RBP14.27□□□□□ -0.13
ATG4D-204ENST00000586417 Q6ZUT4 128 aa14.27□□□□□ -0.13
ATG4D-204ENST00000586417 MRPL52Q86TS9 123 aaKnown RBP14.26□□□□□ -0.13
ATG4D-204ENST00000586417 VSIG2Q96IQ7 327 aa14.26□□□□□ -0.13
ATG4D-204ENST00000586417 PAX4O43316 350 aa14.25□□□□□ -0.13
ATG4D-204ENST00000586417 CTAG1AP78358 180 aa14.25□□□□□ -0.13
ATG4D-204ENST00000586417 MRPS36P82909 103 aaKnown RBP14.25□□□□□ -0.13
ATG4D-204ENST00000586417 NMUP48645 174 aa14.24□□□□□ -0.13
ATG4D-204ENST00000586417 RNASE13Q5GAN3 156 aaKnown RBP14.24□□□□□ -0.13
ATG4D-204ENST00000586417 NFE4Q86UQ8 179 aa14.24□□□□□ -0.13
ATG4D-204ENST00000586417 PCP2Q8IVA1 136 aa14.24□□□□□ -0.13
ATG4D-204ENST00000586417 BOD1L2Q8IYS8 172 aa14.24□□□□□ -0.13
ATG4D-204ENST00000586417 TMEM243Q9BU79 118 aa14.24□□□□□ -0.13
ATG4D-204ENST00000586417 TRBV6-8A0A0A6YYG3 113 aa14.24□□□□□ -0.13
ATG4D-204ENST00000586417 MRPS16Q9Y3D3 137 aaKnown RBP14.24□□□□□ -0.13
ATG4D-204ENST00000586417 TRBV25-1A0A075B6N4 114 aa14.23□□□□□ -0.13
ATG4D-204ENST00000586417 C12orf74Q32Q52 190 aa14.23□□□□□ -0.13
ATG4D-204ENST00000586417 ATP6V0E2Q8NHE4 81 aa14.23□□□□□ -0.13
ATG4D-204ENST00000586417 CSDC2Q9Y534 153 aaKnown RBP14.23□□□□□ -0.13
ATG4D-204ENST00000586417 A0A0J9YY99 117 aa14.22□□□□□ -0.13
ATG4D-204ENST00000586417 DLEU1O43261 78 aa14.22□□□□□ -0.13
ATG4D-204ENST00000586417 CHAC1Q9BUX1 264 aa14.22□□□□□ -0.13
ATG4D-204ENST00000586417 A0A0J9YXV3 536 aa14.21□□□□□ -0.13
ATG4D-204ENST00000586417 F5H768 121 aa14.21□□□□□ -0.13
ATG4D-204ENST00000586417 EREGO14944 169 aa14.21□□□□□ -0.13
ATG4D-204ENST00000586417 TMEM97Q5BJF2 176 aa14.21□□□□□ -0.13
ATG4D-204ENST00000586417 C2orf91Q6ZV80 131 aa14.21□□□□□ -0.13
ATG4D-204ENST00000586417 SNHG12Q9BXW3 62 aa14.21□□□□□ -0.13
ATG4D-204ENST00000586417 TTTY13Q9BZ97 58 aa14.21□□□□□ -0.13
ATG4D-204ENST00000586417 TRAV26-1A0A087WT03 109 aa14.2□□□□□ -0.14
ATG4D-204ENST00000586417 H7C423 109 aa14.2□□□□□ -0.14
ATG4D-204ENST00000586417 NANOS2P60321 138 aaKnown RBP14.2□□□□□ -0.14
ATG4D-204ENST00000586417 E9PLD3 99 aa14.19□□□□□ -0.14
ATG4D-204ENST00000586417 DGAT2L7PQ6IED9 249 aa14.19□□□□□ -0.14
ATG4D-204ENST00000586417 HTN3P15516 51 aa14.19□□□□□ -0.14
ATG4D-204ENST00000586417 C11orf45Q8TAV5 145 aa14.19□□□□□ -0.14
ATG4D-204ENST00000586417 UBE2L6O14933 153 aa14.18□□□□□ -0.14
ATG4D-204ENST00000586417 ZNF22P17026 224 aaPredicted RBP14.18□□□□□ -0.14
ATG4D-204ENST00000586417 M0R143 59 aa14.17□□□□□ -0.14
ATG4D-204ENST00000586417 SMAGPQ0VAQ4 97 aa14.17□□□□□ -0.14
ATG4D-204ENST00000586417 TMEM170BQ5T4T1 132 aa14.17□□□□□ -0.14
ATG4D-204ENST00000586417 Q6ZTC4 211 aa14.17□□□□□ -0.14
ATG4D-204ENST00000586417 C2orf88Q9BSF0 95 aa14.17□□□□□ -0.14
ATG4D-204ENST00000586417 CDC42SE2Q9NRR3 84 aa14.17□□□□□ -0.14
ATG4D-204ENST00000586417 A0A096LPF7 62 aa14.17□□□□□ -0.14
ATG4D-204ENST00000586417 UBE2D1P51668 147 aa14.17□□□□□ -0.14
ATG4D-204ENST00000586417 OR5A1Q8NGJ0 315 aa14.17□□□□□ -0.14
ATG4D-204ENST00000586417 GAGE6Q13070 117 aa14.16□□□□□ -0.14
ATG4D-204ENST00000586417 AMMECR1LQ6DCA0 310 aa14.16□□□□□ -0.14
ATG4D-204ENST00000586417 TINCRA0A1B0GVN0 87 aa14.15□□□□□ -0.14
ATG4D-204ENST00000586417 MAPKAPK5-AS1Q8N8E1 139 aa14.15□□□□□ -0.14
ATG4D-204ENST00000586417 DNAH7Q8WXX0 4024 aa14.15□□□□□ -0.14
ATG4D-204ENST00000586417 TRAV8-6A0A0B4J262 113 aa14.14□□□□□ -0.15
ATG4D-204ENST00000586417 ZNF25P17030 456 aaPredicted RBP14.14□□□□□ -0.15
ATG4D-204ENST00000586417 CHCHD5Q9BSY4 110 aa14.14□□□□□ -0.15
ATG4D-204ENST00000586417 TMEM223A0PJW6 202 aa14.14□□□□□ -0.15
ATG4D-204ENST00000586417 SIVA1O15304 175 aa14.14□□□□□ -0.15
ATG4D-204ENST00000586417 HERVK_113P61574 105 aa14.14□□□□□ -0.15
ATG4D-204ENST00000586417 TMEM101Q96IK0 257 aa14.13□□□□□ -0.15
ATG4D-204ENST00000586417 CSMD3Q7Z407 3707 aa14.13□□□□□ -0.15
ATG4D-204ENST00000586417 MRPL23Q16540 153 aaKnown RBP14.12□□□□□ -0.15
ATG4D-204ENST00000586417 FAM19A3Q7Z5A8 133 aa14.11□□□□□ -0.15
ATG4D-204ENST00000586417 ICOSQ9Y6W8 199 aa14.11□□□□□ -0.15
ATG4D-204ENST00000586417 IGLV4-60A0A075B6I1 120 aa14.11□□□□□ -0.15
ATG4D-204ENST00000586417 HINT1P49773 126 aaPredicted RBP14.1□□□□□ -0.15
ATG4D-204ENST00000586417 TIRAPP58753 221 aa14.1□□□□□ -0.15
ATG4D-204ENST00000586417 TSPEAR-AS2P59090 65 aa14.1□□□□□ -0.15
ATG4D-204ENST00000586417 MPV17L2Q567V2 206 aa14.1□□□□□ -0.15
ATG4D-204ENST00000586417 IGLV5-45A0A087WSX0 123 aa14.09□□□□□ -0.15
ATG4D-204ENST00000586417 LBHQ53QV2 105 aaPredicted RBP14.09□□□□□ -0.15
ATG4D-204ENST00000586417 LINC00242Q5T6M2 205 aa14.09□□□□□ -0.15
ATG4D-204ENST00000586417 BATFQ16520 125 aa14.09□□□□□ -0.15
ATG4D-204ENST00000586417 HIGD1BQ9P298 99 aa14.09□□□□□ -0.15
ATG4D-204ENST00000586417 MYMXA0A1B0GTQ4 84 aa14.08□□□□□ -0.16
ATG4D-204ENST00000586417 H3BNG1 76 aa14.08□□□□□ -0.16
ATG4D-204ENST00000586417 SH2D6Q7Z4S9 175 aa14.08□□□□□ -0.16
ATG4D-204ENST00000586417 TRAV13-1A0A0B4J241 112 aa14.07□□□□□ -0.16
ATG4D-204ENST00000586417 COX6A2Q02221 97 aa14.07□□□□□ -0.16
ATG4D-204ENST00000586417 GEMIN7Q9H840 131 aaKnown RBP14.07□□□□□ -0.16
ATG4D-204ENST00000586417 DEFB131BA0A096LNP1 70 aa14.06□□□□□ -0.16
ATG4D-204ENST00000586417 LEPROTO15243 131 aa14.06□□□□□ -0.16
ATG4D-204ENST00000586417 LINC00469Q8N7U9 141 aa14.06□□□□□ -0.16
ATG4D-204ENST00000586417 A0A1B0GUV1 79 aa14.06□□□□□ -0.16
ATG4D-204ENST00000586417 J3QQQ9 107 aa14.06□□□□□ -0.16
ATG4D-204ENST00000586417 RBX1P62877 108 aa14.06□□□□□ -0.16
ATG4D-204ENST00000586417 BVES-AS1Q5T3Y7 98 aa14.06□□□□□ -0.16
ATG4D-204ENST00000586417 CDKN2A-AS1Q9UH64 79 aa14.06□□□□□ -0.16
ATG4D-204ENST00000586417 HERVK_113P63121 156 aa14.05□□□□□ -0.16
ATG4D-204ENST00000586417 IGHV3-64A0A075B6Q5 118 aa14.04□□□□□ -0.16
ATG4D-204ENST00000586417 ZNF815PA8K554 130 aa14.04□□□□□ -0.16
ATG4D-204ENST00000586417 SEC11AP67812 179 aa14.04□□□□□ -0.16
ATG4D-204ENST00000586417 TMEM262E9PQX1 116 aa14.04□□□□□ -0.16
ATG4D-204ENST00000586417 TENM2Q9NT68 2774 aa14.03□□□□□ -0.16
ATG4D-204ENST00000586417 TRAV8-3A0A0A6YYJ7 113 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms