RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 RAB4AP20338 218 aa7.47□□□□□ -1.21
LIG3-207ENST00000586119 Q0VG73 95 aa7.47□□□□□ -1.21
LIG3-207ENST00000586119 KRTAP26-1Q6PEX3 210 aa7.47□□□□□ -1.21
LIG3-207ENST00000586119 CLPSL2Q6UWE3 100 aa7.47□□□□□ -1.21
LIG3-207ENST00000586119 NTM-AS1Q6ZSK4 140 aa7.47□□□□□ -1.21
LIG3-207ENST00000586119 AMN1Q8IY45 258 aa7.47□□□□□ -1.21
LIG3-207ENST00000586119 RNF185Q96GF1 192 aa7.47□□□□□ -1.21
LIG3-207ENST00000586119 CHCHD7Q9BUK0 85 aa7.47□□□□□ -1.21
LIG3-207ENST00000586119 NIT2Q9NQR4 276 aa7.47□□□□□ -1.21
LIG3-207ENST00000586119 PPBPP02775 128 aa7.46□□□□□ -1.22
LIG3-207ENST00000586119 MT1HL1P0DM35 61 aa7.46□□□□□ -1.22
LIG3-207ENST00000586119 S100A2P29034 98 aa7.46□□□□□ -1.22
LIG3-207ENST00000586119 TRBV24-1A0A075B6N3 115 aa7.45□□□□□ -1.22
LIG3-207ENST00000586119 TRBV6-5A0A0K0K1A5 114 aa7.45□□□□□ -1.22
LIG3-207ENST00000586119 C14orf177Q52M58 125 aa7.45□□□□□ -1.22
LIG3-207ENST00000586119 TMEM97Q5BJF2 176 aa7.45□□□□□ -1.22
LIG3-207ENST00000586119 C9orf163Q8N9P6 203 aa7.45□□□□□ -1.22
LIG3-207ENST00000586119 CHCHD5Q9BSY4 110 aa7.45□□□□□ -1.22
LIG3-207ENST00000586119 CRPP02741 224 aa7.44□□□□□ -1.22
LIG3-207ENST00000586119 MT-ND6P03923 174 aa7.44□□□□□ -1.22
LIG3-207ENST00000586119 RPS10P46783 165 aaKnown RBP7.44□□□□□ -1.22
LIG3-207ENST00000586119 GAGE6Q13070 117 aa7.44□□□□□ -1.22
LIG3-207ENST00000586119 MRPL51Q4U2R6 128 aaKnown RBP7.44□□□□□ -1.22
LIG3-207ENST00000586119 SDIM1Q6ZPB5 146 aa7.44□□□□□ -1.22
LIG3-207ENST00000586119 GNB1LQ9BYB4 327 aa7.44□□□□□ -1.22
LIG3-207ENST00000586119 TRAV26-2A0A0B4J265 109 aa7.43□□□□□ -1.22
LIG3-207ENST00000586119 PHOX2AO14813 284 aa7.43□□□□□ -1.22
LIG3-207ENST00000586119 RBX1P62877 108 aa7.43□□□□□ -1.22
LIG3-207ENST00000586119 TMEM136Q6ZRR5 245 aa7.43□□□□□ -1.22
LIG3-207ENST00000586119 LINC00269Q8N2A0 174 aa7.43□□□□□ -1.22
LIG3-207ENST00000586119 LAMTOR2Q9Y2Q5 125 aa7.43□□□□□ -1.22
LIG3-207ENST00000586119 TNXBP22105 4242 aa7.42□□□□□ -1.22
LIG3-207ENST00000586119 IGLV10-54A0A075B6I4 117 aa7.42□□□□□ -1.22
LIG3-207ENST00000586119 SLPIP03973 132 aa7.42□□□□□ -1.22
LIG3-207ENST00000586119 CKS2P33552 79 aa7.42□□□□□ -1.22
LIG3-207ENST00000586119 DGAT2L7PQ6IED9 249 aa7.42□□□□□ -1.22
LIG3-207ENST00000586119 ORMDL3Q8N138 153 aa7.42□□□□□ -1.22
LIG3-207ENST00000586119 C20orf78Q9BR46 151 aa7.42□□□□□ -1.22
LIG3-207ENST00000586119 ST20Q9HBF5 79 aa7.42□□□□□ -1.22
LIG3-207ENST00000586119 PRR34Q9NV39 138 aa7.42□□□□□ -1.22
LIG3-207ENST00000586119 CHTF8P0CG12 524 aa7.41□□□□□ -1.22
LIG3-207ENST00000586119 ODF1Q14990 250 aa7.41□□□□□ -1.22
LIG3-207ENST00000586119 MIAQ16674 131 aa7.41□□□□□ -1.22
LIG3-207ENST00000586119 NRACQ8N912 160 aa7.41□□□□□ -1.22
LIG3-207ENST00000586119 RPL39LQ96EH5 51 aaKnown RBP7.41□□□□□ -1.22
LIG3-207ENST00000586119 RNF213Q63HN8 5207 aa7.41□□□□□ -1.22
LIG3-207ENST00000586119 TGIF2-C20orf24A0A0A6YYL0 155 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 SDHAF1A6NFY7 115 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 LINC00587B1AMM8 73 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 D6R8Y8 96 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 HIST1H2BKO60814 126 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 NCR2O95944 276 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 APCSP02743 223 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 HIST1H2BJP06899 126 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 HIST1H2BOP23527 126 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 HIST1H2BBP33778 126 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 HIST1H2BDP58876 126 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 HIST1H2BCP62807 126 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 RPL32P62910 135 aaKnown RBP7.4□□□□□ -1.22
LIG3-207ENST00000586119 HIST2H2BEQ16778 126 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.4□□□□□ -1.22
LIG3-207ENST00000586119 HIST1H2BHQ93079 126 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 HIST1H2BNQ99877 126 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 HIST1H2BMQ99879 126 aa7.4□□□□□ -1.22
LIG3-207ENST00000586119 PRSS47A8MTI9 375 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 SMKR1H3BMG3 65 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 I3L3M4 83 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 VCYO14598 125 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 TCAPO15273 167 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 GAS8-AS1O95177 125 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 TNFRSF6BO95407 300 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 POLR2KP53803 58 aaKnown RBP7.39□□□□□ -1.23
LIG3-207ENST00000586119 NDUFA6P56556 154 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 PKIAP61925 76 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
LIG3-207ENST00000586119 COTL1Q14019 142 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 COA6Q5JTJ3 125 aaKnown RBP7.39□□□□□ -1.23
LIG3-207ENST00000586119 HIST3H2BBQ8N257 126 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 C20orf203Q8NBC4 194 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 PRELID3AQ96N28 172 aa7.39□□□□□ -1.23
LIG3-207ENST00000586119 IGLV4-60A0A075B6I1 120 aa7.38□□□□□ -1.23
LIG3-207ENST00000586119 TRBV25-1A0A075B6N4 114 aa7.38□□□□□ -1.23
LIG3-207ENST00000586119 TRBV27A0A0K0K1C4 114 aa7.38□□□□□ -1.23
LIG3-207ENST00000586119 PMCHP20382 165 aa7.38□□□□□ -1.23
LIG3-207ENST00000586119 IQCJQ1A5X6 159 aa7.38□□□□□ -1.23
LIG3-207ENST00000586119 LBHQ53QV2 105 aaPredicted RBP7.38□□□□□ -1.23
LIG3-207ENST00000586119 MRPL18Q9H0U6 180 aaKnown RBP7.38□□□□□ -1.23
LIG3-207ENST00000586119 TRAPPC1Q9Y5R8 145 aa7.38□□□□□ -1.23
LIG3-207ENST00000586119 LRP2P98164 4655 aa7.37□□□□□ -1.23
LIG3-207ENST00000586119 A0A087WYN8 130 aa7.37□□□□□ -1.23
LIG3-207ENST00000586119 IGHV1-24A0A0C4DH33 117 aa7.37□□□□□ -1.23
LIG3-207ENST00000586119 hDV102S1A0JD36 115 aa7.37□□□□□ -1.23
LIG3-207ENST00000586119 NPYP01303 97 aa7.37□□□□□ -1.23
LIG3-207ENST00000586119 REG3AQ06141 175 aa7.37□□□□□ -1.23
LIG3-207ENST00000586119 CIRBPQ14011 172 aaKnown RBP7.37□□□□□ -1.23
LIG3-207ENST00000586119 DPH3Q96FX2 82 aa7.37□□□□□ -1.23
LIG3-207ENST00000586119 KIR2DL4Q99706 377 aa7.37□□□□□ -1.23
LIG3-207ENST00000586119 IFITM10A6NMD0 228 aa7.36□□□□□ -1.23
LIG3-207ENST00000586119 TSTD3H0UI37 97 aa7.36□□□□□ -1.23
LIG3-207ENST00000586119 TRGC2P03986 189 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms