RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 TIMM21Q9BVV7 248 aa9.14□□□□□ -0.95
PRKCSH-202ENST00000585540 GNB1LQ9BYB4 327 aa9.14□□□□□ -0.95
PRKCSH-202ENST00000585540 OR5A1Q8NGJ0 315 aa9.13□□□□□ -0.95
PRKCSH-202ENST00000585540 PKD1P98161 4303 aa9.13□□□□□ -0.95
PRKCSH-202ENST00000585540 MT-ND6P03923 174 aa9.12□□□□□ -0.95
PRKCSH-202ENST00000585540 GCSHP23434 173 aa9.12□□□□□ -0.95
PRKCSH-202ENST00000585540 DGAT2L7PQ6IED9 249 aa9.12□□□□□ -0.95
PRKCSH-202ENST00000585540 MRPL18Q9H0U6 180 aaKnown RBP9.12□□□□□ -0.95
PRKCSH-202ENST00000585540 MAP1LC3AQ9H492 121 aa9.12□□□□□ -0.95
PRKCSH-202ENST00000585540 PKHD1P08F94 4074 aa9.12□□□□□ -0.95
PRKCSH-202ENST00000585540 LOC389332A0A1B0GUA5 103 aa9.11□□□□□ -0.95
PRKCSH-202ENST00000585540 CLPSL2Q6UWE3 100 aa9.11□□□□□ -0.95
PRKCSH-202ENST00000585540 MAPKAPK5-AS1Q8N8E1 139 aa9.11□□□□□ -0.95
PRKCSH-202ENST00000585540 BAALCQ8WXS3 180 aa9.11□□□□□ -0.95
PRKCSH-202ENST00000585540 DYNC1H1Q14204 4646 aaKnown RBP9.1□□□□□ -0.95
PRKCSH-202ENST00000585540 RAB5AP20339 215 aa9.1□□□□□ -0.95
PRKCSH-202ENST00000585540 G0S2P27469 103 aa9.1□□□□□ -0.95
PRKCSH-202ENST00000585540 CFAP161Q6P656 301 aa9.1□□□□□ -0.95
PRKCSH-202ENST00000585540 SMCO4Q9NRQ5 59 aa9.1□□□□□ -0.95
PRKCSH-202ENST00000585540 FABP9Q0Z7S8 132 aa9.09□□□□□ -0.95
PRKCSH-202ENST00000585540 KRTAP26-1Q6PEX3 210 aa9.09□□□□□ -0.95
PRKCSH-202ENST00000585540 NXT2Q9NPJ8 142 aaKnown RBP9.09□□□□□ -0.95
PRKCSH-202ENST00000585540 CDC42SE2Q9NRR3 84 aa9.09□□□□□ -0.95
PRKCSH-202ENST00000585540 SPANXA1Q9NS26 97 aa9.09□□□□□ -0.95
PRKCSH-202ENST00000585540 UBE2D4Q9Y2X8 147 aa9.09□□□□□ -0.95
PRKCSH-202ENST00000585540 WFDC2Q14508 124 aa9.08□□□□□ -0.96
PRKCSH-202ENST00000585540 SS18Q15532 418 aa9.08□□□□□ -0.96
PRKCSH-202ENST00000585540 ZNF664Q8N3J9 261 aa9.08□□□□□ -0.96
PRKCSH-202ENST00000585540 ALKBH7Q9BT30 221 aaPredicted RBP9.08□□□□□ -0.96
PRKCSH-202ENST00000585540 TRAPPC1Q9Y5R8 145 aa9.08□□□□□ -0.96
PRKCSH-202ENST00000585540 LINC01549A6NIU2 74 aa9.07□□□□□ -0.96
PRKCSH-202ENST00000585540 USP17L23D6RBM5 183 aa9.07□□□□□ -0.96
PRKCSH-202ENST00000585540 SCO1O75880 301 aa9.07□□□□□ -0.96
PRKCSH-202ENST00000585540 NPSP0C0P6 89 aa9.07□□□□□ -0.96
PRKCSH-202ENST00000585540 MRPS36P82909 103 aaKnown RBP9.07□□□□□ -0.96
PRKCSH-202ENST00000585540 ORMDL2Q53FV1 153 aa9.07□□□□□ -0.96
PRKCSH-202ENST00000585540 Q8N8P6 123 aa9.07□□□□□ -0.96
PRKCSH-202ENST00000585540 IGLV10-54A0A075B6I4 117 aa9.06□□□□□ -0.96
PRKCSH-202ENST00000585540 LECT2O14960 151 aa9.06□□□□□ -0.96
PRKCSH-202ENST00000585540 IFI27P40305 119 aaPredicted RBP9.06□□□□□ -0.96
PRKCSH-202ENST00000585540 RPL39P62891 51 aaKnown RBP9.06□□□□□ -0.96
PRKCSH-202ENST00000585540 CHCHD10Q8WYQ3 142 aaPredicted RBP9.06□□□□□ -0.96
PRKCSH-202ENST00000585540 AP5S1Q9NUS5 200 aa9.06□□□□□ -0.96
PRKCSH-202ENST00000585540 PYGO1Q9Y3Y4 419 aa9.06□□□□□ -0.96
PRKCSH-202ENST00000585540 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.05□□□□□ -0.96
PRKCSH-202ENST00000585540 LINC00959A0A1B0GUT2 108 aa9.05□□□□□ -0.96
PRKCSH-202ENST00000585540 C1orf196B1AJZ1 125 aa9.05□□□□□ -0.96
PRKCSH-202ENST00000585540 PCLOQ9Y6V0 5065 aa9.05□□□□□ -0.96
PRKCSH-202ENST00000585540 LRP1BQ9NZR2 4599 aa9.04□□□□□ -0.96
PRKCSH-202ENST00000585540 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.04□□□□□ -0.96
PRKCSH-202ENST00000585540 IGKV3OR2-268A0A0C4DH90 116 aa9.04□□□□□ -0.96
PRKCSH-202ENST00000585540 CNBPP62633 177 aaKnown RBP9.04□□□□□ -0.96
PRKCSH-202ENST00000585540 CD164L2Q6UWJ8 174 aa9.04□□□□□ -0.96
PRKCSH-202ENST00000585540 PKIGQ9Y2B9 76 aa9.04□□□□□ -0.96
PRKCSH-202ENST00000585540 GAGE12HA6NDE8 117 aa9.03□□□□□ -0.96
PRKCSH-202ENST00000585540 KRTAP10-1P60331 282 aa9.03□□□□□ -0.96
PRKCSH-202ENST00000585540 Q6ZUT4 128 aa9.03□□□□□ -0.96
PRKCSH-202ENST00000585540 CYSLTR1Q9Y271 337 aa9.03□□□□□ -0.96
PRKCSH-202ENST00000585540 HERC2O95714 4834 aa9.03□□□□□ -0.96
PRKCSH-202ENST00000585540 RNASE13Q5GAN3 156 aaKnown RBP9.02□□□□□ -0.97
PRKCSH-202ENST00000585540 PAPPA-AS1Q5QFB9 102 aa9.02□□□□□ -0.97
PRKCSH-202ENST00000585540 C18orf32Q8TCD1 76 aa9.02□□□□□ -0.97
PRKCSH-202ENST00000585540 DNAH5Q8TE73 4624 aa9.01□□□□□ -0.97
PRKCSH-202ENST00000585540 IGHV1-58A0A0C4DH39 117 aa9.01□□□□□ -0.97
PRKCSH-202ENST00000585540 COLCA2A8K830 154 aa9.01□□□□□ -0.97
PRKCSH-202ENST00000585540 ATP6V1G1O75348 118 aa9.01□□□□□ -0.97
PRKCSH-202ENST00000585540 PRSS1P07477 247 aa9.01□□□□□ -0.97
PRKCSH-202ENST00000585540 FOXI1Q12951 378 aa9.01□□□□□ -0.97
PRKCSH-202ENST00000585540 Q6ZSA8 131 aa9.01□□□□□ -0.97
PRKCSH-202ENST00000585540 C9orf163Q8N9P6 203 aa9.01□□□□□ -0.97
PRKCSH-202ENST00000585540 PRSS3P2Q8NHM4 247 aa9.01□□□□□ -0.97
PRKCSH-202ENST00000585540 GVQW2A0A096LPI5 108 aaPredicted RBP9□□□□□ -0.97
PRKCSH-202ENST00000585540 hDV102S1A0JD36 115 aa9□□□□□ -0.97
PRKCSH-202ENST00000585540 C2orf66Q6UXQ4 117 aa9□□□□□ -0.97
PRKCSH-202ENST00000585540 Q6ZN92 141 aa9□□□□□ -0.97
PRKCSH-202ENST00000585540 FAM104AQ969W3 186 aa9□□□□□ -0.97
PRKCSH-202ENST00000585540 URB1-AS1Q96HZ7 61 aa9□□□□□ -0.97
PRKCSH-202ENST00000585540 OPRPNQ99935 248 aaPredicted RBP9□□□□□ -0.97
PRKCSH-202ENST00000585540 APOMO95445 188 aa8.99□□□□□ -0.97
PRKCSH-202ENST00000585540 TRGC2P03986 189 aa8.99□□□□□ -0.97
PRKCSH-202ENST00000585540 FUSP35637 526 aaKnown RBP eCLIP8.99□□□□□ -0.97
PRKCSH-202ENST00000585540 XCL1P47992 114 aa8.99□□□□□ -0.97
PRKCSH-202ENST00000585540 FA2HQ7L5A8 372 aa8.99□□□□□ -0.97
PRKCSH-202ENST00000585540 C15orf56Q8N910 161 aa8.99□□□□□ -0.97
PRKCSH-202ENST00000585540 TMEM141Q96I45 108 aa8.99□□□□□ -0.97
PRKCSH-202ENST00000585540 C2orf88Q9BSF0 95 aa8.99□□□□□ -0.97
PRKCSH-202ENST00000585540 LINC01546A6NGU7 62 aa8.98□□□□□ -0.97
PRKCSH-202ENST00000585540 COX7A2LO14548 114 aa8.98□□□□□ -0.97
PRKCSH-202ENST00000585540 TEX43Q6ZNM6 134 aa8.98□□□□□ -0.97
PRKCSH-202ENST00000585540 Q8N1X5 172 aa8.98□□□□□ -0.97
PRKCSH-202ENST00000585540 TIMM17AQ99595 171 aa8.98□□□□□ -0.97
PRKCSH-202ENST00000585540 TRAV13-1A0A0B4J241 112 aa8.97□□□□□ -0.97
PRKCSH-202ENST00000585540 IFITM10A6NMD0 228 aa8.97□□□□□ -0.97
PRKCSH-202ENST00000585540 XGP55808 180 aa8.97□□□□□ -0.97
PRKCSH-202ENST00000585540 KIAA1109Q2LD37 5005 aa8.97□□□□□ -0.97
PRKCSH-202ENST00000585540 IGLV4-3A0A075B6K6 122 aa8.96□□□□□ -0.98
PRKCSH-202ENST00000585540 F8WDY8 70 aa8.96□□□□□ -0.98
PRKCSH-202ENST00000585540 MALP21145 153 aa8.96□□□□□ -0.98
PRKCSH-202ENST00000585540 SEC11AP67812 179 aa8.96□□□□□ -0.98
PRKCSH-202ENST00000585540 IGHV3-64A0A075B6Q5 118 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms