RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 Q9UF83 564 aa7.33□□□□□ -1.24
LIG3-203ENST00000585370 CSDC2Q9Y534 153 aaKnown RBP7.33□□□□□ -1.24
LIG3-203ENST00000585370 IGLV4-3A0A075B6K6 122 aa7.32□□□□□ -1.24
LIG3-203ENST00000585370 SIVA1O15304 175 aa7.32□□□□□ -1.24
LIG3-203ENST00000585370 ATP5G1P05496 136 aa7.32□□□□□ -1.24
LIG3-203ENST00000585370 ZC2HC1BQ5TFG8 222 aa7.32□□□□□ -1.24
LIG3-203ENST00000585370 STPG4Q8N801 248 aa7.32□□□□□ -1.24
LIG3-203ENST00000585370 AMELXQ99217 191 aa7.32□□□□□ -1.24
LIG3-203ENST00000585370 UBE2D4Q9Y2X8 147 aa7.32□□□□□ -1.24
LIG3-203ENST00000585370 TRBV25-1A0A075B6N4 114 aa7.31□□□□□ -1.24
LIG3-203ENST00000585370 IGHV3-38A0A0C4DH36 116 aa7.31□□□□□ -1.24
LIG3-203ENST00000585370 M0R143 59 aa7.31□□□□□ -1.24
LIG3-203ENST00000585370 LINC00694P0DN24 101 aa7.31□□□□□ -1.24
LIG3-203ENST00000585370 HERVK_113P61574 105 aa7.31□□□□□ -1.24
LIG3-203ENST00000585370 ANKRD39Q53RE8 183 aa7.31□□□□□ -1.24
LIG3-203ENST00000585370 DGAT2L7PQ6IED9 249 aa7.31□□□□□ -1.24
LIG3-203ENST00000585370 SH2D6Q7Z4S9 175 aa7.31□□□□□ -1.24
LIG3-203ENST00000585370 NFE4Q86UQ8 179 aa7.31□□□□□ -1.24
LIG3-203ENST00000585370 DEFB104AQ8WTQ1 72 aa7.31□□□□□ -1.24
LIG3-203ENST00000585370 TMEM243Q9BU79 118 aa7.31□□□□□ -1.24
LIG3-203ENST00000585370 HYDINQ4G0P3 5121 aa7.3□□□□□ -1.24
LIG3-203ENST00000585370 PLECQ15149 4684 aaKnown RBP7.3□□□□□ -1.24
LIG3-203ENST00000585370 PAX4O43316 350 aa7.3□□□□□ -1.24
LIG3-203ENST00000585370 BOD1L2Q8IYS8 172 aa7.3□□□□□ -1.24
LIG3-203ENST00000585370 ATP6V0E2Q8NHE4 81 aa7.3□□□□□ -1.24
LIG3-203ENST00000585370 C2orf88Q9BSF0 95 aa7.3□□□□□ -1.24
LIG3-203ENST00000585370 C11orf68Q9H3H3 251 aaKnown RBP7.3□□□□□ -1.24
LIG3-203ENST00000585370 BIRC6Q9NR09 4857 aa7.29□□□□□ -1.24
LIG3-203ENST00000585370 C11orf86A6NJI1 115 aa7.29□□□□□ -1.24
LIG3-203ENST00000585370 UBE2L6O14933 153 aa7.29□□□□□ -1.24
LIG3-203ENST00000585370 GYPEP15421 78 aa7.29□□□□□ -1.24
LIG3-203ENST00000585370 ZNF25P17030 456 aaPredicted RBP7.29□□□□□ -1.24
LIG3-203ENST00000585370 SEC11AP67812 179 aa7.29□□□□□ -1.24
LIG3-203ENST00000585370 CTAG1AP78358 180 aa7.29□□□□□ -1.24
LIG3-203ENST00000585370 NTM-AS1Q6ZSK4 140 aa7.29□□□□□ -1.24
LIG3-203ENST00000585370 TMEM101Q96IK0 257 aa7.29□□□□□ -1.24
LIG3-203ENST00000585370 TM2D3Q9BRN9 247 aa7.29□□□□□ -1.24
LIG3-203ENST00000585370 IGLV4-69A0A075B6H9 119 aa7.28□□□□□ -1.24
LIG3-203ENST00000585370 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.28□□□□□ -1.24
LIG3-203ENST00000585370 TRAV26-1A0A087WT03 109 aa7.28□□□□□ -1.24
LIG3-203ENST00000585370 TRBV6-8A0A0A6YYG3 113 aa7.28□□□□□ -1.24
LIG3-203ENST00000585370 IGKV2-29A2NJV5 120 aaPredicted RBP7.28□□□□□ -1.24
LIG3-203ENST00000585370 E9PLD3 99 aa7.28□□□□□ -1.24
LIG3-203ENST00000585370 FGF6P10767 208 aa7.28□□□□□ -1.24
LIG3-203ENST00000585370 NMUP48645 174 aa7.28□□□□□ -1.24
LIG3-203ENST00000585370 LOC100131303A0A0U1RQF7 123 aa7.27□□□□□ -1.25
LIG3-203ENST00000585370 TINCRA0A1B0GVN0 87 aa7.27□□□□□ -1.25
LIG3-203ENST00000585370 DEFB4AO15263 64 aa7.27□□□□□ -1.25
LIG3-203ENST00000585370 MRPL23Q16540 153 aaKnown RBP7.27□□□□□ -1.25
LIG3-203ENST00000585370 AMMECR1LQ6DCA0 310 aa7.27□□□□□ -1.25
LIG3-203ENST00000585370 ZFAND6Q6FIF0 208 aa7.27□□□□□ -1.25
LIG3-203ENST00000585370 OR5A1Q8NGJ0 315 aa7.27□□□□□ -1.25
LIG3-203ENST00000585370 OPRPNQ99935 248 aaPredicted RBP7.27□□□□□ -1.25
LIG3-203ENST00000585370 HIGD1BQ9P298 99 aa7.27□□□□□ -1.25
LIG3-203ENST00000585370 LCE6AA0A183 80 aa7.26□□□□□ -1.25
LIG3-203ENST00000585370 H3BNG1 76 aa7.26□□□□□ -1.25
LIG3-203ENST00000585370 TIRAPP58753 221 aa7.26□□□□□ -1.25
LIG3-203ENST00000585370 TMEM170BQ5T4T1 132 aa7.26□□□□□ -1.25
LIG3-203ENST00000585370 FAM19A3Q7Z5A8 133 aa7.26□□□□□ -1.25
LIG3-203ENST00000585370 FAM104AQ969W3 186 aa7.26□□□□□ -1.25
LIG3-203ENST00000585370 SPATA25Q9BR10 227 aa7.26□□□□□ -1.25
LIG3-203ENST00000585370 CELA1Q9UNI1 258 aa7.26□□□□□ -1.25
LIG3-203ENST00000585370 A0A0J9YXV3 536 aa7.25□□□□□ -1.25
LIG3-203ENST00000585370 F5H768 121 aa7.25□□□□□ -1.25
LIG3-203ENST00000585370 CEMP1Q6PRD7 247 aaPredicted RBP7.25□□□□□ -1.25
LIG3-203ENST00000585370 VSIG2Q96IQ7 327 aa7.25□□□□□ -1.25
LIG3-203ENST00000585370 CHAC1Q9BUX1 264 aa7.25□□□□□ -1.25
LIG3-203ENST00000585370 SNHG12Q9BXW3 62 aa7.25□□□□□ -1.25
LIG3-203ENST00000585370 CDC42SE2Q9NRR3 84 aa7.25□□□□□ -1.25
LIG3-203ENST00000585370 IGKV2D-26A0A0A0MRZ7 120 aa7.24□□□□□ -1.25
LIG3-203ENST00000585370 A0A1B0GUV1 79 aa7.24□□□□□ -1.25
LIG3-203ENST00000585370 H3BRM9 83 aa7.24□□□□□ -1.25
LIG3-203ENST00000585370 ZNF22P17026 224 aaPredicted RBP7.24□□□□□ -1.25
LIG3-203ENST00000585370 UBE2D1P51668 147 aa7.24□□□□□ -1.25
LIG3-203ENST00000585370 C12orf74Q32Q52 190 aa7.24□□□□□ -1.25
LIG3-203ENST00000585370 Q6ZUT4 128 aa7.24□□□□□ -1.25
LIG3-203ENST00000585370 PCP2Q8IVA1 136 aa7.24□□□□□ -1.25
LIG3-203ENST00000585370 PLEKHB2Q96CS7 222 aa7.24□□□□□ -1.25
LIG3-203ENST00000585370 CHCHD5Q9BSY4 110 aa7.24□□□□□ -1.25
LIG3-203ENST00000585370 GEMIN7Q9H840 131 aaKnown RBP7.24□□□□□ -1.25
LIG3-203ENST00000585370 ICOSQ9Y6W8 199 aa7.24□□□□□ -1.25
LIG3-203ENST00000585370 TRAV8-6A0A0B4J262 113 aa7.23□□□□□ -1.25
LIG3-203ENST00000585370 MYMXA0A1B0GTQ4 84 aa7.23□□□□□ -1.25
LIG3-203ENST00000585370 TMEM223A0PJW6 202 aa7.23□□□□□ -1.25
LIG3-203ENST00000585370 LEPROTO15243 131 aa7.23□□□□□ -1.25
LIG3-203ENST00000585370 HERVK_113P63121 156 aa7.23□□□□□ -1.25
LIG3-203ENST00000585370 TAL2Q16559 108 aa7.23□□□□□ -1.25
LIG3-203ENST00000585370 C2orf91Q6ZV80 131 aa7.23□□□□□ -1.25
LIG3-203ENST00000585370 CCL25O15444 150 aa7.22□□□□□ -1.25
LIG3-203ENST00000585370 HSD52Q0P140 79 aa7.22□□□□□ -1.25
LIG3-203ENST00000585370 COL5A1-AS1Q5SY13 56 aa7.22□□□□□ -1.25
LIG3-203ENST00000585370 IGLV5-45A0A087WSX0 123 aa7.21□□□□□ -1.26
LIG3-203ENST00000585370 A0A0J9YY99 117 aa7.21□□□□□ -1.26
LIG3-203ENST00000585370 J3QQQ9 107 aa7.21□□□□□ -1.26
LIG3-203ENST00000585370 HTN3P15516 51 aa7.21□□□□□ -1.26
LIG3-203ENST00000585370 LGALS3P17931 250 aaKnown RBP7.21□□□□□ -1.26
LIG3-203ENST00000585370 GAGE6Q13070 117 aa7.21□□□□□ -1.26
LIG3-203ENST00000585370 RETNQ9HD89 108 aa7.21□□□□□ -1.26
LIG3-203ENST00000585370 ZNF815PA8K554 130 aa7.2□□□□□ -1.26
LIG3-203ENST00000585370 EREGO14944 169 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms