RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 CEMP1Q6PRD7 247 aaPredicted RBP9.69□□□□□ -0.86
UBBP4-202ENST00000584755 CHTOPQ9Y3Y2 248 aaKnown RBP9.69□□□□□ -0.86
UBBP4-202ENST00000584755 IGKCP01834 107 aa9.68□□□□□ -0.86
UBBP4-202ENST00000584755 PLNP26678 52 aa9.68□□□□□ -0.86
UBBP4-202ENST00000584755 MAJINQ3KP22 176 aa9.68□□□□□ -0.86
UBBP4-202ENST00000584755 ZC2HC1BQ5TFG8 222 aa9.68□□□□□ -0.86
UBBP4-202ENST00000584755 VCX2Q9H322 139 aa9.68□□□□□ -0.86
UBBP4-202ENST00000584755 COL7A1Q02388 2944 aa9.68□□□□□ -0.86
UBBP4-202ENST00000584755 IGLV4-69A0A075B6H9 119 aa9.67□□□□□ -0.86
UBBP4-202ENST00000584755 TRAV10A0A0B4J240 114 aa9.67□□□□□ -0.86
UBBP4-202ENST00000584755 UBE2L6O14933 153 aa9.67□□□□□ -0.86
UBBP4-202ENST00000584755 ZNF25P17030 456 aaPredicted RBP9.67□□□□□ -0.86
UBBP4-202ENST00000584755 TIRAPP58753 221 aa9.67□□□□□ -0.86
UBBP4-202ENST00000584755 ANKRD39Q53RE8 183 aa9.67□□□□□ -0.86
UBBP4-202ENST00000584755 Q6ZUT4 128 aa9.67□□□□□ -0.86
UBBP4-202ENST00000584755 PAM16Q9Y3D7 125 aa9.67□□□□□ -0.86
UBBP4-202ENST00000584755 PRKDCP78527 4128 aaKnown RBP9.67□□□□□ -0.86
UBBP4-202ENST00000584755 DEFA6Q01524 100 aa9.66□□□□□ -0.86
UBBP4-202ENST00000584755 SPATA45Q537H7 98 aa9.66□□□□□ -0.86
UBBP4-202ENST00000584755 CBY1Q9Y3M2 126 aa9.66□□□□□ -0.86
UBBP4-202ENST00000584755 STAB2Q8WWQ8 2551 aa9.66□□□□□ -0.86
UBBP4-202ENST00000584755 hDV102S1A0JD36 115 aa9.66□□□□□ -0.86
UBBP4-202ENST00000584755 PKIAP61925 76 aa9.66□□□□□ -0.86
UBBP4-202ENST00000584755 DGAT2L7PQ6IED9 249 aa9.66□□□□□ -0.86
UBBP4-202ENST00000584755 NFE4Q86UQ8 179 aa9.66□□□□□ -0.86
UBBP4-202ENST00000584755 CHCHD5Q9BSY4 110 aa9.66□□□□□ -0.86
UBBP4-202ENST00000584755 CDC42SE2Q9NRR3 84 aa9.66□□□□□ -0.86
UBBP4-202ENST00000584755 HSBP1L1C9JCN9 74 aa9.65□□□□□ -0.87
UBBP4-202ENST00000584755 GAGE6Q13070 117 aa9.65□□□□□ -0.87
UBBP4-202ENST00000584755 LELP1Q5T871 98 aa9.65□□□□□ -0.87
UBBP4-202ENST00000584755 OR5A1Q8NGJ0 315 aa9.65□□□□□ -0.87
UBBP4-202ENST00000584755 A0A1B0GUV1 79 aa9.64□□□□□ -0.87
UBBP4-202ENST00000584755 IGLC3P0DOY3 106 aa9.64□□□□□ -0.87
UBBP4-202ENST00000584755 AMMECR1LQ6DCA0 310 aa9.64□□□□□ -0.87
UBBP4-202ENST00000584755 LYPD5Q6UWN5 251 aa9.64□□□□□ -0.87
UBBP4-202ENST00000584755 TMEM101Q96IK0 257 aa9.64□□□□□ -0.87
UBBP4-202ENST00000584755 C11orf86A6NJI1 115 aa9.63□□□□□ -0.87
UBBP4-202ENST00000584755 TSTD3H0UI37 97 aa9.63□□□□□ -0.87
UBBP4-202ENST00000584755 RNASE13Q5GAN3 156 aaKnown RBP9.63□□□□□ -0.87
UBBP4-202ENST00000584755 FAM19A3Q7Z5A8 133 aa9.63□□□□□ -0.87
UBBP4-202ENST00000584755 UBE2D1P51668 147 aa9.62□□□□□ -0.87
UBBP4-202ENST00000584755 STPG4Q8N801 248 aa9.62□□□□□ -0.87
UBBP4-202ENST00000584755 C2orf88Q9BSF0 95 aa9.62□□□□□ -0.87
UBBP4-202ENST00000584755 PRO1933Q9H354 126 aa9.62□□□□□ -0.87
UBBP4-202ENST00000584755 IGLV4-60A0A075B6I1 120 aa9.61□□□□□ -0.87
UBBP4-202ENST00000584755 C15orf53Q8NAA6 179 aa9.61□□□□□ -0.87
UBBP4-202ENST00000584755 A0A0J9YXV3 536 aa9.6□□□□□ -0.87
UBBP4-202ENST00000584755 RBX1P62877 108 aa9.6□□□□□ -0.87
UBBP4-202ENST00000584755 CHAC1Q9BUX1 264 aa9.6□□□□□ -0.87
UBBP4-202ENST00000584755 TINCRA0A1B0GVN0 87 aa9.59□□□□□ -0.87
UBBP4-202ENST00000584755 MPV17L2Q567V2 206 aa9.59□□□□□ -0.87
UBBP4-202ENST00000584755 DYNC2H1Q8NCM8 4307 aaKnown RBP9.59□□□□□ -0.87
UBBP4-202ENST00000584755 IGLV5-45A0A087WSX0 123 aa9.58□□□□□ -0.88
UBBP4-202ENST00000584755 TMEM262E9PQX1 116 aa9.58□□□□□ -0.88
UBBP4-202ENST00000584755 ZNF22P17026 224 aaPredicted RBP9.58□□□□□ -0.88
UBBP4-202ENST00000584755 ESRGQ1W209 222 aa9.58□□□□□ -0.88
UBBP4-202ENST00000584755 MIEN1Q9BRT3 115 aa9.58□□□□□ -0.88
UBBP4-202ENST00000584755 COX8AP10176 69 aa9.57□□□□□ -0.88
UBBP4-202ENST00000584755 SEC11AP67812 179 aa9.57□□□□□ -0.88
UBBP4-202ENST00000584755 LINC00242Q5T6M2 205 aa9.57□□□□□ -0.88
UBBP4-202ENST00000584755 C14orf144Q96I85 54 aa9.57□□□□□ -0.88
UBBP4-202ENST00000584755 UQCR10Q9UDW1 63 aa9.57□□□□□ -0.88
UBBP4-202ENST00000584755 IGKV2D-26A0A0A0MRZ7 120 aa9.56□□□□□ -0.88
UBBP4-202ENST00000584755 TRAV8-6A0A0B4J262 113 aa9.56□□□□□ -0.88
UBBP4-202ENST00000584755 E9PLD3 99 aa9.56□□□□□ -0.88
UBBP4-202ENST00000584755 TMEM170BQ5T4T1 132 aa9.56□□□□□ -0.88
UBBP4-202ENST00000584755 TRAV13-1A0A0B4J241 112 aa9.55□□□□□ -0.88
UBBP4-202ENST00000584755 TMEM223A0PJW6 202 aa9.55□□□□□ -0.88
UBBP4-202ENST00000584755 DDTP30046 118 aa9.55□□□□□ -0.88
UBBP4-202ENST00000584755 HERVK_113P63121 156 aa9.55□□□□□ -0.88
UBBP4-202ENST00000584755 DLEU1O43261 78 aa9.54□□□□□ -0.88
UBBP4-202ENST00000584755 HERVK_113P61574 105 aa9.54□□□□□ -0.88
UBBP4-202ENST00000584755 COX6A2Q02221 97 aa9.54□□□□□ -0.88
UBBP4-202ENST00000584755 SLC25A34Q6PIV7 304 aa9.54□□□□□ -0.88
UBBP4-202ENST00000584755 BOD1L2Q8IYS8 172 aa9.54□□□□□ -0.88
UBBP4-202ENST00000584755 Q8N3U1 123 aa9.54□□□□□ -0.88
UBBP4-202ENST00000584755 GEMIN7Q9H840 131 aaKnown RBP9.54□□□□□ -0.88
UBBP4-202ENST00000584755 DNAH7Q8WXX0 4024 aa9.54□□□□□ -0.88
UBBP4-202ENST00000584755 IGLL5B9A064 214 aa9.53□□□□□ -0.88
UBBP4-202ENST00000584755 FBN3Q75N90 2809 aa9.53□□□□□ -0.88
UBBP4-202ENST00000584755 LINC00959A0A1B0GUT2 108 aa9.53□□□□□ -0.88
UBBP4-202ENST00000584755 CCL25O15444 150 aa9.53□□□□□ -0.88
UBBP4-202ENST00000584755 NMUP48645 174 aa9.53□□□□□ -0.88
UBBP4-202ENST00000584755 TCTAP57738 103 aa9.53□□□□□ -0.88
UBBP4-202ENST00000584755 WFDC10BQ8IUB3 73 aa9.53□□□□□ -0.88
UBBP4-202ENST00000584755 PCP2Q8IVA1 136 aa9.53□□□□□ -0.88
UBBP4-202ENST00000584755 CDKN2A-AS1Q9UH64 79 aa9.53□□□□□ -0.88
UBBP4-202ENST00000584755 PRR34Q9NV39 138 aa9.52□□□□□ -0.89
UBBP4-202ENST00000584755 MRPS16Q9Y3D3 137 aaKnown RBP9.52□□□□□ -0.89
UBBP4-202ENST00000584755 ANGP03950 147 aaKnown RBP9.51□□□□□ -0.89
UBBP4-202ENST00000584755 LINC00269Q8N2A0 174 aa9.51□□□□□ -0.89
UBBP4-202ENST00000584755 IGHV3OR16-9A0A0B4J2B5 98 aa9.5□□□□□ -0.89
UBBP4-202ENST00000584755 H3BRM9 83 aa9.5□□□□□ -0.89
UBBP4-202ENST00000584755 LEPROTO15243 131 aa9.5□□□□□ -0.89
UBBP4-202ENST00000584755 REG3AQ06141 175 aa9.5□□□□□ -0.89
UBBP4-202ENST00000584755 LINC01556Q5JQF7 62 aa9.5□□□□□ -0.89
UBBP4-202ENST00000584755 TP73-AS1Q9UF72 201 aa9.5□□□□□ -0.89
UBBP4-202ENST00000584755 LINC00588Q9Y4M8 146 aa9.5□□□□□ -0.89
UBBP4-202ENST00000584755 CSMD3Q7Z407 3707 aa9.49□□□□□ -0.89
UBBP4-202ENST00000584755 IGHV1-58A0A0C4DH39 117 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms