RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 RPL36ALQ969Q0 106 aaKnown RBP7.39□□□□□ -1.23
RFFL-212ENST00000584655 C9orf85Q96MD7 179 aa7.39□□□□□ -1.23
RFFL-212ENST00000584655 SIGMAR1Q99720 223 aa7.39□□□□□ -1.23
RFFL-212ENST00000584655 CNFNQ9BYD5 112 aa7.39□□□□□ -1.23
RFFL-212ENST00000584655 BOD1L2Q8IYS8 172 aa7.39□□□□□ -1.23
RFFL-212ENST00000584655 LINC01549A6NIU2 74 aa7.39□□□□□ -1.23
RFFL-212ENST00000584655 F8VRH5 84 aa7.39□□□□□ -1.23
RFFL-212ENST00000584655 XCL1P47992 114 aa7.39□□□□□ -1.23
RFFL-212ENST00000584655 INSL3P51460 131 aa7.39□□□□□ -1.23
RFFL-212ENST00000584655 FAM19A4Q96LR4 140 aa7.39□□□□□ -1.23
RFFL-212ENST00000584655 A0A087WX48 190 aa7.38□□□□□ -1.23
RFFL-212ENST00000584655 TSHBP01222 138 aa7.38□□□□□ -1.23
RFFL-212ENST00000584655 GIG44P09565 113 aaPredicted RBP7.38□□□□□ -1.23
RFFL-212ENST00000584655 TRAV26-1A0A087WT03 109 aa7.37□□□□□ -1.23
RFFL-212ENST00000584655 A8MWV9 139 aa7.37□□□□□ -1.23
RFFL-212ENST00000584655 HERVK_113P61574 105 aa7.37□□□□□ -1.23
RFFL-212ENST00000584655 OR5A1Q8NGJ0 315 aa7.37□□□□□ -1.23
RFFL-212ENST00000584655 IGHV4-30-4P0DP06 118 aa7.37□□□□□ -1.23
RFFL-212ENST00000584655 DAD1P61803 113 aa7.37□□□□□ -1.23
RFFL-212ENST00000584655 HHLA3Q9XRX5 114 aa7.37□□□□□ -1.23
RFFL-212ENST00000584655 PPP1R17O96001 155 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 PFN2P35080 140 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 POLR2KP53803 58 aaKnown RBP7.36□□□□□ -1.23
RFFL-212ENST00000584655 FHL3Q13643 280 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 PMVKQ15126 192 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 CELA1Q9UNI1 258 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 COX8CQ7Z4L0 72 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 RNF152Q8N8N0 203 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 TSPEAR-AS2P59090 65 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 C12orf74Q32Q52 190 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 MEIG1Q5JSS6 88 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 C11orf72Q8NBR9 251 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 IGHV3-30P01768 117 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 IGHV3-33P01772 117 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 IGHV3-30-3P0DP02 117 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 IGHV3-30-5P0DP03 117 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 CEND1Q8N111 149 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 TOMM6Q96B49 74 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 C20orf78Q9BR46 151 aa7.36□□□□□ -1.23
RFFL-212ENST00000584655 GAGE12HA6NDE8 117 aa7.35□□□□□ -1.23
RFFL-212ENST00000584655 NXPH4O95158 308 aa7.35□□□□□ -1.23
RFFL-212ENST00000584655 NDUFA11Q86Y39 141 aa7.35□□□□□ -1.23
RFFL-212ENST00000584655 C20orf203Q8NBC4 194 aa7.35□□□□□ -1.23
RFFL-212ENST00000584655 PRIMA1Q86XR5 153 aa7.35□□□□□ -1.23
RFFL-212ENST00000584655 CDKN2A-AS1Q9UH64 79 aa7.35□□□□□ -1.23
RFFL-212ENST00000584655 IGHV4-28A0A0C4DH34 117 aa7.34□□□□□ -1.23
RFFL-212ENST00000584655 PAX4O43316 350 aa7.34□□□□□ -1.23
RFFL-212ENST00000584655 TMEM263Q8WUH6 116 aaKnown RBP7.34□□□□□ -1.23
RFFL-212ENST00000584655 IGLV4-3A0A075B6K6 122 aa7.34□□□□□ -1.23
RFFL-212ENST00000584655 TRBV7-3A0A075B6L6 115 aa7.34□□□□□ -1.23
RFFL-212ENST00000584655 IGLL5B9A064 214 aa7.34□□□□□ -1.23
RFFL-212ENST00000584655 Q9HAA7 133 aa7.33□□□□□ -1.24
RFFL-212ENST00000584655 K7EQD1 137 aa7.33□□□□□ -1.24
RFFL-212ENST00000584655 PLNP26678 52 aa7.33□□□□□ -1.24
RFFL-212ENST00000584655 CKS1BP61024 79 aa7.33□□□□□ -1.24
RFFL-212ENST00000584655 COX6A2Q02221 97 aa7.33□□□□□ -1.24
RFFL-212ENST00000584655 KLK9Q2XQG4 91 aa7.33□□□□□ -1.24
RFFL-212ENST00000584655 VSIG2Q96IQ7 327 aa7.33□□□□□ -1.24
RFFL-212ENST00000584655 ANGP03950 147 aaKnown RBP7.33□□□□□ -1.24
RFFL-212ENST00000584655 C9orf66Q5T8R8 295 aa7.33□□□□□ -1.24
RFFL-212ENST00000584655 TMEM141Q96I45 108 aa7.33□□□□□ -1.24
RFFL-212ENST00000584655 IGLV4-60A0A075B6I1 120 aa7.32□□□□□ -1.24
RFFL-212ENST00000584655 IGHV4-4A0A075B6R2 117 aa7.32□□□□□ -1.24
RFFL-212ENST00000584655 TIMM21Q9BVV7 248 aa7.32□□□□□ -1.24
RFFL-212ENST00000584655 C1QTNF4Q9BXJ3 329 aa7.32□□□□□ -1.24
RFFL-212ENST00000584655 J3QQQ9 107 aa7.32□□□□□ -1.24
RFFL-212ENST00000584655 NTM-AS1Q6ZSK4 140 aa7.31□□□□□ -1.24
RFFL-212ENST00000584655 C19orf73Q9NVV2 129 aa7.31□□□□□ -1.24
RFFL-212ENST00000584655 TRBV27A0A0K0K1C4 114 aa7.3□□□□□ -1.24
RFFL-212ENST00000584655 MYMXA0A1B0GTQ4 84 aa7.3□□□□□ -1.24
RFFL-212ENST00000584655 IGIPA6NJ69 53 aa7.3□□□□□ -1.24
RFFL-212ENST00000584655 TMEM238LA0A1B0GVL6 79 aa7.3□□□□□ -1.24
RFFL-212ENST00000584655 A6NJY4 79 aa7.3□□□□□ -1.24
RFFL-212ENST00000584655 NANOS2P60321 138 aaKnown RBP7.3□□□□□ -1.24
RFFL-212ENST00000584655 C16orf95Q9H693 158 aa7.3□□□□□ -1.24
RFFL-212ENST00000584655 C9JAW5 83 aa7.3□□□□□ -1.24
RFFL-212ENST00000584655 TMEM101Q96IK0 257 aa7.3□□□□□ -1.24
RFFL-212ENST00000584655 TMEM243Q9BU79 118 aa7.3□□□□□ -1.24
RFFL-212ENST00000584655 UFSP1Q6NVU6 142 aa7.29□□□□□ -1.24
RFFL-212ENST00000584655 IGLV4-69A0A075B6H9 119 aa7.29□□□□□ -1.24
RFFL-212ENST00000584655 C16orf74Q96GX8 76 aa7.29□□□□□ -1.24
RFFL-212ENST00000584655 CLUHP3Q96NS8 147 aa7.29□□□□□ -1.24
RFFL-212ENST00000584655 Q9H8V8 135 aa7.29□□□□□ -1.24
RFFL-212ENST00000584655 NDUFA12Q9UI09 145 aa7.29□□□□□ -1.24
RFFL-212ENST00000584655 KLK12Q9UKR0 248 aa7.29□□□□□ -1.24
RFFL-212ENST00000584655 LECT2O14960 151 aa7.29□□□□□ -1.24
RFFL-212ENST00000584655 KRTAP10-11P60412 298 aa7.29□□□□□ -1.24
RFFL-212ENST00000584655 TRAV25A0A0B4J276 109 aa7.28□□□□□ -1.24
RFFL-212ENST00000584655 RHODO00212 210 aa7.28□□□□□ -1.24
RFFL-212ENST00000584655 ZNF22P17026 224 aaPredicted RBP7.28□□□□□ -1.24
RFFL-212ENST00000584655 C2orf82Q6UX34 121 aa7.28□□□□□ -1.24
RFFL-212ENST00000584655 DAZ2Q13117 558 aaKnown RBP7.28□□□□□ -1.24
RFFL-212ENST00000584655 DAZ4Q86SG3 579 aaKnown RBP7.28□□□□□ -1.24
RFFL-212ENST00000584655 LINC00269Q8N2A0 174 aa7.28□□□□□ -1.24
RFFL-212ENST00000584655 ATP6V0E2Q8NHE4 81 aa7.28□□□□□ -1.24
RFFL-212ENST00000584655 DAZ3Q9NR90 486 aaKnown RBP7.28□□□□□ -1.24
RFFL-212ENST00000584655 UBE2WQ96B02 151 aa7.28□□□□□ -1.24
RFFL-212ENST00000584655 CHCHD7Q9BUK0 85 aa7.28□□□□□ -1.24
RFFL-212ENST00000584655 TRBV20-1A0A075B6N2 111 aa7.27□□□□□ -1.25
RFFL-212ENST00000584655 OR13C6PQ8NH95 151 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms