RNA–Protein interactions for RNA: ENST00000582276.1

PGAP3-208, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-208ENST00000582276 SMAGPQ0VAQ4 97 aa12.05□□□□□ -0.48
PGAP3-208ENST00000582276 MRPL18Q9H0U6 180 aaKnown RBP12.05□□□□□ -0.48
PGAP3-208ENST00000582276 PGPEP1Q9NXJ5 209 aa12.05□□□□□ -0.48
PGAP3-208ENST00000582276 MT-ND6P03923 174 aa12.04□□□□□ -0.48
PGAP3-208ENST00000582276 FABP9Q0Z7S8 132 aa12.04□□□□□ -0.48
PGAP3-208ENST00000582276 Q8N814 137 aa12.04□□□□□ -0.48
PGAP3-208ENST00000582276 Q8N8P6 123 aa12.04□□□□□ -0.48
PGAP3-208ENST00000582276 RPL39P62891 51 aaKnown RBP12.03□□□□□ -0.48
PGAP3-208ENST00000582276 UBE2D4Q9Y2X8 147 aa12.03□□□□□ -0.48
PGAP3-208ENST00000582276 ZNF664Q8N3J9 261 aa12.02□□□□□ -0.49
PGAP3-208ENST00000582276 CDC42SE2Q9NRR3 84 aa12.02□□□□□ -0.49
PGAP3-208ENST00000582276 PKHD1P08F94 4074 aa12.01□□□□□ -0.49
PGAP3-208ENST00000582276 IFI27P40305 119 aaPredicted RBP12.01□□□□□ -0.49
PGAP3-208ENST00000582276 KRTAP26-1Q6PEX3 210 aa12.01□□□□□ -0.49
PGAP3-208ENST00000582276 TRAPPC1Q9Y5R8 145 aa12.01□□□□□ -0.49
PGAP3-208ENST00000582276 RNASE13Q5GAN3 156 aaKnown RBP12□□□□□ -0.49
PGAP3-208ENST00000582276 CDPF1Q6NVV7 123 aa12□□□□□ -0.49
PGAP3-208ENST00000582276 CBLN2Q8IUK8 224 aa12□□□□□ -0.49
PGAP3-208ENST00000582276 ALKBH7Q9BT30 221 aaPredicted RBP12□□□□□ -0.49
PGAP3-208ENST00000582276 TIMM21Q9BVV7 248 aa12□□□□□ -0.49
PGAP3-208ENST00000582276 NXT2Q9NPJ8 142 aaKnown RBP12□□□□□ -0.49
PGAP3-208ENST00000582276 CSDC2Q9Y534 153 aaKnown RBP12□□□□□ -0.49
PGAP3-208ENST00000582276 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.99□□□□□ -0.49
PGAP3-208ENST00000582276 IGLV5-52A0A0A0MRZ9 124 aa11.99□□□□□ -0.49
PGAP3-208ENST00000582276 GAGE12HA6NDE8 117 aa11.99□□□□□ -0.49
PGAP3-208ENST00000582276 NTN5Q8WTR8 489 aaPredicted RBP11.99□□□□□ -0.49
PGAP3-208ENST00000582276 CHCHD10Q8WYQ3 142 aaPredicted RBP11.99□□□□□ -0.49
PGAP3-208ENST00000582276 SMCO4Q9NRQ5 59 aa11.99□□□□□ -0.49
PGAP3-208ENST00000582276 DNAH11Q96DT5 4516 aa11.99□□□□□ -0.49
PGAP3-208ENST00000582276 USP17L23D6RBM5 183 aa11.98□□□□□ -0.49
PGAP3-208ENST00000582276 Q6ZUT4 128 aa11.98□□□□□ -0.49
PGAP3-208ENST00000582276 PRSS3P2Q8NHM4 247 aa11.98□□□□□ -0.49
PGAP3-208ENST00000582276 SPANXA1Q9NS26 97 aa11.98□□□□□ -0.49
PGAP3-208ENST00000582276 HERC2O95714 4834 aa11.98□□□□□ -0.49
PGAP3-208ENST00000582276 LINC00959A0A1B0GUT2 108 aa11.97□□□□□ -0.49
PGAP3-208ENST00000582276 SS18Q15532 418 aa11.97□□□□□ -0.49
PGAP3-208ENST00000582276 C14orf177Q52M58 125 aa11.97□□□□□ -0.49
PGAP3-208ENST00000582276 ORMDL2Q53FV1 153 aa11.97□□□□□ -0.49
PGAP3-208ENST00000582276 YPEL4Q96NS1 127 aa11.97□□□□□ -0.49
PGAP3-208ENST00000582276 K7EMI3 77 aa11.96□□□□□ -0.49
PGAP3-208ENST00000582276 OPRPNQ99935 248 aaPredicted RBP11.96□□□□□ -0.49
PGAP3-208ENST00000582276 CCL25O15444 150 aa11.95□□□□□ -0.5
PGAP3-208ENST00000582276 XCL1P47992 114 aa11.95□□□□□ -0.5
PGAP3-208ENST00000582276 CYSLTR1Q9Y271 337 aa11.95□□□□□ -0.5
PGAP3-208ENST00000582276 TRAV13-1A0A0B4J241 112 aa11.94□□□□□ -0.5
PGAP3-208ENST00000582276 GCSHP23434 173 aa11.94□□□□□ -0.5
PGAP3-208ENST00000582276 C2orf66Q6UXQ4 117 aa11.94□□□□□ -0.5
PGAP3-208ENST00000582276 MRPS36P82909 103 aaKnown RBP11.93□□□□□ -0.5
PGAP3-208ENST00000582276 KRTAP17-1Q9BYP8 105 aa11.93□□□□□ -0.5
PGAP3-208ENST00000582276 C1orf196B1AJZ1 125 aa11.92□□□□□ -0.5
PGAP3-208ENST00000582276 PRSS1P07477 247 aa11.92□□□□□ -0.5
PGAP3-208ENST00000582276 FOXI1Q12951 378 aa11.92□□□□□ -0.5
PGAP3-208ENST00000582276 FA2HQ7L5A8 372 aa11.92□□□□□ -0.5
PGAP3-208ENST00000582276 FAM104AQ969W3 186 aa11.92□□□□□ -0.5
PGAP3-208ENST00000582276 PYGO1Q9Y3Y4 419 aa11.92□□□□□ -0.5
PGAP3-208ENST00000582276 G0S2P27469 103 aa11.91□□□□□ -0.5
PGAP3-208ENST00000582276 KRTAP10-1P60331 282 aa11.91□□□□□ -0.5
PGAP3-208ENST00000582276 hDV102S1A0JD36 115 aa11.9□□□□□ -0.5
PGAP3-208ENST00000582276 CFAP161Q6P656 301 aa11.9□□□□□ -0.5
PGAP3-208ENST00000582276 TMEM141Q96I45 108 aa11.9□□□□□ -0.5
PGAP3-208ENST00000582276 IGLV4-3A0A075B6K6 122 aa11.89□□□□□ -0.51
PGAP3-208ENST00000582276 IFITM10A6NMD0 228 aa11.89□□□□□ -0.51
PGAP3-208ENST00000582276 CD164L2Q6UWJ8 174 aa11.89□□□□□ -0.51
PGAP3-208ENST00000582276 C18orf32Q8TCD1 76 aa11.89□□□□□ -0.51
PGAP3-208ENST00000582276 LINC01546A6NGU7 62 aa11.88□□□□□ -0.51
PGAP3-208ENST00000582276 LINC01620Q4KN68 170 aa11.88□□□□□ -0.51
PGAP3-208ENST00000582276 TOMM6Q96B49 74 aa11.88□□□□□ -0.51
PGAP3-208ENST00000582276 Q6ZN92 141 aa11.87□□□□□ -0.51
PGAP3-208ENST00000582276 C15orf56Q8N910 161 aa11.87□□□□□ -0.51
PGAP3-208ENST00000582276 KIAA1109Q2LD37 5005 aa11.86□□□□□ -0.51
PGAP3-208ENST00000582276 DYNC1H1Q14204 4646 aaKnown RBP11.86□□□□□ -0.51
PGAP3-208ENST00000582276 IGIPA6NJ69 53 aa11.86□□□□□ -0.51
PGAP3-208ENST00000582276 HIGD2BQ4VC39 106 aa11.86□□□□□ -0.51
PGAP3-208ENST00000582276 TEX43Q6ZNM6 134 aa11.86□□□□□ -0.51
PGAP3-208ENST00000582276 AP5S1Q9NUS5 200 aa11.86□□□□□ -0.51
PGAP3-208ENST00000582276 COX7A2LO14548 114 aa11.85□□□□□ -0.51
PGAP3-208ENST00000582276 CDK2AP2O75956 126 aa11.85□□□□□ -0.51
PGAP3-208ENST00000582276 LINC00614P0C842 121 aa11.85□□□□□ -0.51
PGAP3-208ENST00000582276 MALP21145 153 aa11.85□□□□□ -0.51
PGAP3-208ENST00000582276 ZC2HC1BQ5TFG8 222 aa11.85□□□□□ -0.51
PGAP3-208ENST00000582276 SCGB3A1Q96QR1 104 aa11.85□□□□□ -0.51
PGAP3-208ENST00000582276 VCX2Q9H322 139 aa11.85□□□□□ -0.51
PGAP3-208ENST00000582276 DNAH5Q8TE73 4624 aa11.84□□□□□ -0.51
PGAP3-208ENST00000582276 SCO1O75880 301 aa11.84□□□□□ -0.51
PGAP3-208ENST00000582276 C5orf38Q86SI9 138 aa11.84□□□□□ -0.51
PGAP3-208ENST00000582276 C2orf88Q9BSF0 95 aa11.84□□□□□ -0.51
PGAP3-208ENST00000582276 IGHV1-58A0A0C4DH39 117 aa11.83□□□□□ -0.52
PGAP3-208ENST00000582276 COLCA2A8K830 154 aa11.83□□□□□ -0.52
PGAP3-208ENST00000582276 TRGC2P03986 189 aa11.83□□□□□ -0.52
PGAP3-208ENST00000582276 NPSP0C0P6 89 aa11.83□□□□□ -0.52
PGAP3-208ENST00000582276 RAB5BP61020 215 aa11.83□□□□□ -0.52
PGAP3-208ENST00000582276 ERASQ7Z444 233 aa11.83□□□□□ -0.52
PGAP3-208ENST00000582276 URB1-AS1Q96HZ7 61 aa11.83□□□□□ -0.52
PGAP3-208ENST00000582276 TIMM17AQ99595 171 aa11.83□□□□□ -0.52
PGAP3-208ENST00000582276 LINC01549A6NIU2 74 aa11.82□□□□□ -0.52
PGAP3-208ENST00000582276 PAPPA-AS1Q5QFB9 102 aa11.82□□□□□ -0.52
PGAP3-208ENST00000582276 AMELXQ99217 191 aa11.82□□□□□ -0.52
PGAP3-208ENST00000582276 GVQW2A0A096LPI5 108 aaPredicted RBP11.81□□□□□ -0.52
PGAP3-208ENST00000582276 LINC00173Q6ZV60 143 aa11.81□□□□□ -0.52
PGAP3-208ENST00000582276 LRP1BQ9NZR2 4599 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms