RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 CLPSL2Q6UWE3 100 aa8.24□□□□□ -1.09
SNORD55-201ENST00000581525 Q6ZSA8 131 aa8.24□□□□□ -1.09
SNORD55-201ENST00000581525 CLRN3Q8NCR9 226 aa8.24□□□□□ -1.09
SNORD55-201ENST00000581525 SMIM2Q9BVW6 85 aa8.24□□□□□ -1.09
SNORD55-201ENST00000581525 USP17L23D6RBM5 183 aa8.23□□□□□ -1.09
SNORD55-201ENST00000581525 PRSS1P07477 247 aa8.23□□□□□ -1.09
SNORD55-201ENST00000581525 SMAGPQ0VAQ4 97 aa8.23□□□□□ -1.09
SNORD55-201ENST00000581525 RNASEKQ6P5S7 137 aaKnown RBP8.23□□□□□ -1.09
SNORD55-201ENST00000581525 PRELID3AQ96N28 172 aa8.23□□□□□ -1.09
SNORD55-201ENST00000581525 UBE2D4Q9Y2X8 147 aa8.23□□□□□ -1.09
SNORD55-201ENST00000581525 IGLV10-54A0A075B6I4 117 aa8.22□□□□□ -1.09
SNORD55-201ENST00000581525 CCL25O15444 150 aa8.22□□□□□ -1.09
SNORD55-201ENST00000581525 FCER1GP30273 86 aa8.22□□□□□ -1.09
SNORD55-201ENST00000581525 Q8N1X5 172 aa8.22□□□□□ -1.09
SNORD55-201ENST00000581525 ZNF664Q8N3J9 261 aa8.22□□□□□ -1.09
SNORD55-201ENST00000581525 FAM104AQ969W3 186 aa8.22□□□□□ -1.09
SNORD55-201ENST00000581525 TMEM101Q96IK0 257 aa8.22□□□□□ -1.09
SNORD55-201ENST00000581525 VPS13BQ7Z7G8 4022 aa8.21□□□□□ -1.1
SNORD55-201ENST00000581525 LINC00959A0A1B0GUT2 108 aa8.21□□□□□ -1.1
SNORD55-201ENST00000581525 RHEBQ15382 184 aa8.21□□□□□ -1.1
SNORD55-201ENST00000581525 TMEM18Q96B42 140 aa8.21□□□□□ -1.1
SNORD55-201ENST00000581525 FAM30AQ9NZY2 134 aa8.21□□□□□ -1.1
SNORD55-201ENST00000581525 ABCA13Q86UQ4 5058 aa8.2□□□□□ -1.1
SNORD55-201ENST00000581525 PCLOQ9Y6V0 5065 aa8.2□□□□□ -1.1
SNORD55-201ENST00000581525 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.2□□□□□ -1.1
SNORD55-201ENST00000581525 HLA-DQA1P01909 254 aa8.2□□□□□ -1.1
SNORD55-201ENST00000581525 CNBPP62633 177 aaKnown RBP8.2□□□□□ -1.1
SNORD55-201ENST00000581525 C9orf163Q8N9P6 203 aa8.2□□□□□ -1.1
SNORD55-201ENST00000581525 CHCHD10Q8WYQ3 142 aaPredicted RBP8.2□□□□□ -1.1
SNORD55-201ENST00000581525 GNB1LQ9BYB4 327 aa8.2□□□□□ -1.1
SNORD55-201ENST00000581525 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
SNORD55-201ENST00000581525 GAGE12HA6NDE8 117 aa8.19□□□□□ -1.1
SNORD55-201ENST00000581525 K7EMI3 77 aa8.19□□□□□ -1.1
SNORD55-201ENST00000581525 MRPS36P82909 103 aaKnown RBP8.19□□□□□ -1.1
SNORD55-201ENST00000581525 FOXI1Q12951 378 aa8.19□□□□□ -1.1
SNORD55-201ENST00000581525 PYGO1Q9Y3Y4 419 aa8.19□□□□□ -1.1
SNORD55-201ENST00000581525 SLPIP03973 132 aa8.18□□□□□ -1.1
SNORD55-201ENST00000581525 S100PP25815 95 aa8.18□□□□□ -1.1
SNORD55-201ENST00000581525 COX19Q49B96 90 aa8.18□□□□□ -1.1
SNORD55-201ENST00000581525 Q8N8P6 123 aa8.18□□□□□ -1.1
SNORD55-201ENST00000581525 C15orf56Q8N910 161 aa8.18□□□□□ -1.1
SNORD55-201ENST00000581525 C1orf196B1AJZ1 125 aa8.17□□□□□ -1.1
SNORD55-201ENST00000581525 RPL39P62891 51 aaKnown RBP8.17□□□□□ -1.1
SNORD55-201ENST00000581525 CFAP161Q6P656 301 aa8.17□□□□□ -1.1
SNORD55-201ENST00000581525 CD164L2Q6UWJ8 174 aa8.17□□□□□ -1.1
SNORD55-201ENST00000581525 MAP1LC3AQ9H492 121 aa8.17□□□□□ -1.1
SNORD55-201ENST00000581525 SPANXA1Q9NS26 97 aa8.17□□□□□ -1.1
SNORD55-201ENST00000581525 SS18Q15532 418 aa8.16□□□□□ -1.1
SNORD55-201ENST00000581525 RPS10P5Q9NQ39 176 aa8.16□□□□□ -1.1
SNORD55-201ENST00000581525 GVQW2A0A096LPI5 108 aaPredicted RBP8.15□□□□□ -1.1
SNORD55-201ENST00000581525 IGKV3OR2-268A0A0C4DH90 116 aa8.15□□□□□ -1.1
SNORD55-201ENST00000581525 LINC01546A6NGU7 62 aa8.15□□□□□ -1.1
SNORD55-201ENST00000581525 NPSP0C0P6 89 aa8.15□□□□□ -1.1
SNORD55-201ENST00000581525 RAB5AP20339 215 aa8.15□□□□□ -1.1
SNORD55-201ENST00000581525 SDIM1Q6ZPB5 146 aa8.15□□□□□ -1.1
SNORD55-201ENST00000581525 NXT2Q9NPJ8 142 aaKnown RBP8.15□□□□□ -1.1
SNORD55-201ENST00000581525 SNAPINO95295 136 aa8.14□□□□□ -1.11
SNORD55-201ENST00000581525 APOC3P02656 99 aa8.14□□□□□ -1.11
SNORD55-201ENST00000581525 MT-ND6P03923 174 aa8.14□□□□□ -1.11
SNORD55-201ENST00000581525 LINC01620Q4KN68 170 aa8.14□□□□□ -1.11
SNORD55-201ENST00000581525 Q6ZUT4 128 aa8.14□□□□□ -1.11
SNORD55-201ENST00000581525 SVBPQ8N300 66 aa8.14□□□□□ -1.11
SNORD55-201ENST00000581525 ALKBH7Q9BT30 221 aaPredicted RBP8.14□□□□□ -1.11
SNORD55-201ENST00000581525 LOC389332A0A1B0GUA5 103 aa8.13□□□□□ -1.11
SNORD55-201ENST00000581525 hDV102S1A0JD36 115 aa8.13□□□□□ -1.11
SNORD55-201ENST00000581525 XCL1P47992 114 aa8.13□□□□□ -1.11
SNORD55-201ENST00000581525 ORMDL2Q53FV1 153 aa8.13□□□□□ -1.11
SNORD55-201ENST00000581525 CHAC1Q9BUX1 264 aa8.13□□□□□ -1.11
SNORD55-201ENST00000581525 IGHV1-58A0A0C4DH39 117 aa8.12□□□□□ -1.11
SNORD55-201ENST00000581525 CIRBPQ14011 172 aaKnown RBP8.12□□□□□ -1.11
SNORD55-201ENST00000581525 NDUFA5Q16718 116 aa8.12□□□□□ -1.11
SNORD55-201ENST00000581525 KIAA1644Q3SXP7 199 aa8.12□□□□□ -1.11
SNORD55-201ENST00000581525 YPEL4Q96NS1 127 aa8.12□□□□□ -1.11
SNORD55-201ENST00000581525 OPRPNQ99935 248 aaPredicted RBP8.12□□□□□ -1.11
SNORD55-201ENST00000581525 AP5S1Q9NUS5 200 aa8.12□□□□□ -1.11
SNORD55-201ENST00000581525 SRRM2Q9UQ35 2752 aaKnown RBP8.11□□□□□ -1.11
SNORD55-201ENST00000581525 IGLV4-3A0A075B6K6 122 aa8.11□□□□□ -1.11
SNORD55-201ENST00000581525 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.11□□□□□ -1.11
SNORD55-201ENST00000581525 IGHV3OR16-9A0A0B4J2B5 98 aa8.11□□□□□ -1.11
SNORD55-201ENST00000581525 IGIPA6NJ69 53 aa8.11□□□□□ -1.11
SNORD55-201ENST00000581525 G0S2P27469 103 aa8.11□□□□□ -1.11
SNORD55-201ENST00000581525 IFI27P40305 119 aaPredicted RBP8.11□□□□□ -1.11
SNORD55-201ENST00000581525 AMELXQ99217 191 aa8.11□□□□□ -1.11
SNORD55-201ENST00000581525 TRAV13-1A0A0B4J241 112 aa8.1□□□□□ -1.11
SNORD55-201ENST00000581525 RNASE13Q5GAN3 156 aaKnown RBP8.1□□□□□ -1.11
SNORD55-201ENST00000581525 C2orf66Q6UXQ4 117 aa8.1□□□□□ -1.11
SNORD55-201ENST00000581525 FAM19A3Q7Z5A8 133 aa8.1□□□□□ -1.11
SNORD55-201ENST00000581525 CIRBP-AS1Q8TBR5 109 aa8.1□□□□□ -1.11
SNORD55-201ENST00000581525 CYSLTR1Q9Y271 337 aa8.1□□□□□ -1.11
SNORD55-201ENST00000581525 TGIF2-C20orf24A0A0A6YYL0 155 aa8.09□□□□□ -1.11
SNORD55-201ENST00000581525 LINC01549A6NIU2 74 aa8.09□□□□□ -1.11
SNORD55-201ENST00000581525 EPM2AB3EWF7 344 aa8.09□□□□□ -1.11
SNORD55-201ENST00000581525 COX7A2LO14548 114 aa8.09□□□□□ -1.11
SNORD55-201ENST00000581525 SCXQ7RTU7 201 aa8.09□□□□□ -1.11
SNORD55-201ENST00000581525 TOMM6Q96B49 74 aa8.09□□□□□ -1.11
SNORD55-201ENST00000581525 TMEM141Q96I45 108 aa8.09□□□□□ -1.11
SNORD55-201ENST00000581525 MRPL18Q9H0U6 180 aaKnown RBP8.09□□□□□ -1.11
SNORD55-201ENST00000581525 IGHV3-64A0A075B6Q5 118 aa8.08□□□□□ -1.12
SNORD55-201ENST00000581525 SMR3BP02814 79 aaPredicted RBP8.08□□□□□ -1.12
SNORD55-201ENST00000581525 FABP9Q0Z7S8 132 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms