RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 S100A12P80511 92 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 GAGE1Q13065 139 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 GAGE4Q13068 117 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 GAGE5Q13069 117 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 RHOHQ15669 191 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 LGALS9CQ6DKI2 356 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 NTM-AS1Q6ZSK4 140 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 ERASQ7Z444 233 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 OPRPNQ99935 248 aaPredicted RBP4.36□□□□□ -1.71
PTPRM-213ENST00000580949 CHCHD7Q9BUK0 85 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 VAMP8Q9BV40 100 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 CYSLTR1Q9Y271 337 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 PAM16Q9Y3D7 125 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 A0A087WX48 190 aa4.35□□□□□ -1.71
PTPRM-213ENST00000580949 hDV102S1A0JD36 115 aa4.35□□□□□ -1.71
PTPRM-213ENST00000580949 C20orf202A1L168 122 aa4.35□□□□□ -1.71
PTPRM-213ENST00000580949 LINC00587B1AMM8 73 aa4.35□□□□□ -1.71
PTPRM-213ENST00000580949 LINC00694P0DN24 101 aa4.35□□□□□ -1.71
PTPRM-213ENST00000580949 RPL36AP83881 106 aaKnown RBP4.35□□□□□ -1.71
PTPRM-213ENST00000580949 SPATA45Q537H7 98 aa4.35□□□□□ -1.71
PTPRM-213ENST00000580949 CEMP1Q6PRD7 247 aaPredicted RBP4.35□□□□□ -1.71
PTPRM-213ENST00000580949 SBSPONQ8IVN8 264 aa4.35□□□□□ -1.71
PTPRM-213ENST00000580949 BAALCQ8WXS3 180 aa4.35□□□□□ -1.71
PTPRM-213ENST00000580949 VSIG2Q96IQ7 327 aa4.35□□□□□ -1.71
PTPRM-213ENST00000580949 HHLA3Q9XRX5 114 aa4.35□□□□□ -1.71
PTPRM-213ENST00000580949 TENM3Q9P273 2699 aa4.35□□□□□ -1.71
PTPRM-213ENST00000580949 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-213ENST00000580949 TRAV12-1A0A0B4J245 112 aa4.34□□□□□ -1.71
PTPRM-213ENST00000580949 IGKV2-29A2NJV5 120 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-213ENST00000580949 SPART-AS1P0CW21 52 aa4.34□□□□□ -1.71
PTPRM-213ENST00000580949 G0S2P27469 103 aa4.34□□□□□ -1.71
PTPRM-213ENST00000580949 CRYBA4P53673 196 aa4.34□□□□□ -1.71
PTPRM-213ENST00000580949 DAD1P61803 113 aa4.34□□□□□ -1.71
PTPRM-213ENST00000580949 COTL1Q14019 142 aa4.34□□□□□ -1.71
PTPRM-213ENST00000580949 C12orf74Q32Q52 190 aa4.34□□□□□ -1.71
PTPRM-213ENST00000580949 STPG4Q8N801 248 aa4.34□□□□□ -1.71
PTPRM-213ENST00000580949 MPLKIPQ8TAP9 179 aa4.34□□□□□ -1.71
PTPRM-213ENST00000580949 TMEM141Q96I45 108 aa4.34□□□□□ -1.71
PTPRM-213ENST00000580949 CST9LQ9H4G1 147 aa4.34□□□□□ -1.71
PTPRM-213ENST00000580949 MRPL35Q9NZE8 188 aaKnown RBP4.34□□□□□ -1.71
PTPRM-213ENST00000580949 IGLV4-3A0A075B6K6 122 aa4.33□□□□□ -1.72
PTPRM-213ENST00000580949 DPM2O94777 84 aa4.33□□□□□ -1.72
PTPRM-213ENST00000580949 IGLC3P0DOY3 106 aa4.33□□□□□ -1.72
PTPRM-213ENST00000580949 DEFB121Q5J5C9 76 aa4.33□□□□□ -1.72
PTPRM-213ENST00000580949 Q6ZN92 141 aa4.33□□□□□ -1.72
PTPRM-213ENST00000580949 DAZ4Q86SG3 579 aaKnown RBP4.33□□□□□ -1.72
PTPRM-213ENST00000580949 C14orf144Q96I85 54 aa4.33□□□□□ -1.72
PTPRM-213ENST00000580949 TIMM17AQ99595 171 aa4.33□□□□□ -1.72
PTPRM-213ENST00000580949 MIEN1Q9BRT3 115 aa4.33□□□□□ -1.72
PTPRM-213ENST00000580949 PRADC1Q9BSG0 188 aa4.33□□□□□ -1.72
PTPRM-213ENST00000580949 DAZ3Q9NR90 486 aaKnown RBP4.33□□□□□ -1.72
PTPRM-213ENST00000580949 TP73-AS1Q9UF72 201 aa4.33□□□□□ -1.72
PTPRM-213ENST00000580949 PRO0255Q9UI72 69 aa4.33□□□□□ -1.72
PTPRM-213ENST00000580949 CHTOPQ9Y3Y2 248 aaKnown RBP4.33□□□□□ -1.72
PTPRM-213ENST00000580949 PYGO1Q9Y3Y4 419 aa4.33□□□□□ -1.72
PTPRM-213ENST00000580949 DNHD1Q96M86 4753 aa4.32□□□□□ -1.72
PTPRM-213ENST00000580949 IGLV4-69A0A075B6H9 119 aa4.32□□□□□ -1.72
PTPRM-213ENST00000580949 A0A0J9YY99 117 aa4.32□□□□□ -1.72
PTPRM-213ENST00000580949 LINC01549A6NIU2 74 aa4.32□□□□□ -1.72
PTPRM-213ENST00000580949 TSTD3H0UI37 97 aa4.32□□□□□ -1.72
PTPRM-213ENST00000580949 ATP5G1P05496 136 aa4.32□□□□□ -1.72
PTPRM-213ENST00000580949 DDTP30046 118 aa4.32□□□□□ -1.72
PTPRM-213ENST00000580949 TCTAP57738 103 aa4.32□□□□□ -1.72
PTPRM-213ENST00000580949 PMVKQ15126 192 aa4.32□□□□□ -1.72
PTPRM-213ENST00000580949 MRAPQ8TCY5 172 aa4.32□□□□□ -1.72
PTPRM-213ENST00000580949 TM2D3Q9BRN9 247 aa4.32□□□□□ -1.72
PTPRM-213ENST00000580949 UBE2D4Q9Y2X8 147 aa4.32□□□□□ -1.72
PTPRM-213ENST00000580949 TRAV26-1A0A087WT03 109 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 IGKV2D-26A0A0A0MRZ7 120 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 A0A0J9YWU9 116 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 C11orf86A6NJI1 115 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 F5H768 121 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 F8VRH5 84 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 IGKCP01834 107 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 HTN3P15516 51 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 RNASE13Q5GAN3 156 aaKnown RBP4.31□□□□□ -1.72
PTPRM-213ENST00000580949 ATP6V0E2Q8NHE4 81 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 AMELXQ99217 191 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 TIMM21Q9BVV7 248 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 GTSF1LQ9H1H1 148 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 C11orf68Q9H3H3 251 aaKnown RBP4.31□□□□□ -1.72
PTPRM-213ENST00000580949 SPANXA1Q9NS26 97 aa4.31□□□□□ -1.72
PTPRM-213ENST00000580949 A0A096LPF7 62 aa4.3□□□□□ -1.72
PTPRM-213ENST00000580949 TRBV6-8A0A0A6YYG3 113 aa4.3□□□□□ -1.72
PTPRM-213ENST00000580949 A0A0J9YXV3 536 aa4.3□□□□□ -1.72
PTPRM-213ENST00000580949 HSBP1L1C9JCN9 74 aa4.3□□□□□ -1.72
PTPRM-213ENST00000580949 FGF6P10767 208 aa4.3□□□□□ -1.72
PTPRM-213ENST00000580949 PLNP26678 52 aa4.3□□□□□ -1.72
PTPRM-213ENST00000580949 NANOS2P60321 138 aaKnown RBP4.3□□□□□ -1.72
PTPRM-213ENST00000580949 Q6ZUT4 128 aa4.3□□□□□ -1.72
PTPRM-213ENST00000580949 MRPL52Q86TS9 123 aaKnown RBP4.3□□□□□ -1.72
PTPRM-213ENST00000580949 TMEM243Q9BU79 118 aa4.3□□□□□ -1.72
PTPRM-213ENST00000580949 VCX2Q9H322 139 aa4.3□□□□□ -1.72
PTPRM-213ENST00000580949 TEX48A0A1B0GUV7 120 aa4.29□□□□□ -1.72
PTPRM-213ENST00000580949 COX8AP10176 69 aa4.29□□□□□ -1.72
PTPRM-213ENST00000580949 MRPS36P82909 103 aaKnown RBP4.29□□□□□ -1.72
PTPRM-213ENST00000580949 GAGE6Q13070 117 aa4.29□□□□□ -1.72
PTPRM-213ENST00000580949 Q6ZTC4 211 aa4.29□□□□□ -1.72
PTPRM-213ENST00000580949 NFE4Q86UQ8 179 aa4.29□□□□□ -1.72
PTPRM-213ENST00000580949 PCP2Q8IVA1 136 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms