RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 I3L3M4 83 aa9.71□□□□□ -0.85
CDK5RAP3-219ENST00000580670 GYPEP15421 78 aa9.71□□□□□ -0.85
CDK5RAP3-219ENST00000580670 KIR2DL4Q99706 377 aa9.71□□□□□ -0.85
CDK5RAP3-219ENST00000580670 COL7A1Q02388 2944 aa9.71□□□□□ -0.86
CDK5RAP3-219ENST00000580670 A0A1W2PPM0 123 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 PHLDA1Q8WV24 401 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 TRAV26-1A0A087WT03 109 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 IGHV3-38A0A0C4DH36 116 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 FCER1GP30273 86 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 UBE2D3P61077 147 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 UBE2D2P62837 147 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 LAGE3Q14657 143 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 VSIG2Q96IQ7 327 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 PRKDCP78527 4128 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-219ENST00000580670 K7EMI3 77 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 TSHBP01222 138 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 ORMDL2Q53FV1 153 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 PCP2Q8IVA1 136 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 DEFB131BA0A096LNP1 70 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 SMIM13P0DJ93 91 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 LINC00694P0DN24 101 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 ODF1Q14990 250 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 DAZ4Q86SG3 579 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 DAZ3Q9NR90 486 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 SPCS1Q9Y6A9 102 aa9.67□□□□□ -0.86
CDK5RAP3-219ENST00000580670 STAB2Q8WWQ8 2551 aa9.66□□□□□ -0.86
CDK5RAP3-219ENST00000580670 ATP5LO75964 103 aa9.66□□□□□ -0.86
CDK5RAP3-219ENST00000580670 FABP2P12104 132 aa9.66□□□□□ -0.86
CDK5RAP3-219ENST00000580670 TRAV10A0A0B4J240 114 aa9.65□□□□□ -0.86
CDK5RAP3-219ENST00000580670 NMUP48645 174 aa9.65□□□□□ -0.86
CDK5RAP3-219ENST00000580670 TM2D2Q9BX73 214 aa9.65□□□□□ -0.86
CDK5RAP3-219ENST00000580670 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.87
CDK5RAP3-219ENST00000580670 ICOSQ9Y6W8 199 aa9.65□□□□□ -0.87
CDK5RAP3-219ENST00000580670 A0A096LPF7 62 aa9.64□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TMEM238C9JI98 176 aa9.64□□□□□ -0.87
CDK5RAP3-219ENST00000580670 IGKCP01834 107 aa9.64□□□□□ -0.87
CDK5RAP3-219ENST00000580670 MRPL23Q16540 153 aaKnown RBP9.64□□□□□ -0.87
CDK5RAP3-219ENST00000580670 IGKV2D-26A0A0A0MRZ7 120 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 H3BNG1 76 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TAL2Q16559 108 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 RAB37Q96AX2 223 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 C2orf66Q6UXQ4 117 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 NTM-AS1Q6ZSK4 140 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 CHAC1Q9BUX1 264 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 GTSF1LQ9H1H1 148 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 DPM2O94777 84 aa9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 FXYD2P54710 66 aa9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 C20orf203Q8NBC4 194 aa9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TOMM6Q96B49 74 aa9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 NAA38Q9BRA0 125 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 CHCHD7Q9BUK0 85 aa9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 FBN3Q75N90 2809 aa9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TRBV25-1A0A075B6N4 114 aa9.61□□□□□ -0.87
CDK5RAP3-219ENST00000580670 E9PLD3 99 aa9.61□□□□□ -0.87
CDK5RAP3-219ENST00000580670 PRSS1P07477 247 aa9.61□□□□□ -0.87
CDK5RAP3-219ENST00000580670 RPL39P62891 51 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-219ENST00000580670 SH2D6Q7Z4S9 175 aa9.61□□□□□ -0.87
CDK5RAP3-219ENST00000580670 CEND1Q8N111 149 aa9.61□□□□□ -0.87
CDK5RAP3-219ENST00000580670 GCSHP23434 173 aa9.6□□□□□ -0.87
CDK5RAP3-219ENST00000580670 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TRBV6-8A0A0A6YYG3 113 aa9.6□□□□□ -0.87
CDK5RAP3-219ENST00000580670 IGKV2-29A2NJV5 120 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-219ENST00000580670 SCGB3A1Q96QR1 104 aa9.6□□□□□ -0.87
CDK5RAP3-219ENST00000580670 LINC01549A6NIU2 74 aa9.59□□□□□ -0.87
CDK5RAP3-219ENST00000580670 SCGB1A1P11684 91 aa9.59□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TCTAP57738 103 aa9.59□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TMEM243Q9BU79 118 aa9.59□□□□□ -0.87
CDK5RAP3-219ENST00000580670 A0A087WX48 190 aa9.58□□□□□ -0.88
CDK5RAP3-219ENST00000580670 F8W1H4 67 aa9.58□□□□□ -0.88
CDK5RAP3-219ENST00000580670 ZC2HC1BQ5TFG8 222 aa9.58□□□□□ -0.88
CDK5RAP3-219ENST00000580670 CHTOPQ9Y3Y2 248 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-219ENST00000580670 TRAV12-1A0A0B4J245 112 aa9.57□□□□□ -0.88
CDK5RAP3-219ENST00000580670 IGLL5B9A064 214 aa9.57□□□□□ -0.88
CDK5RAP3-219ENST00000580670 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.57□□□□□ -0.88
CDK5RAP3-219ENST00000580670 UBE2L6O14933 153 aa9.57□□□□□ -0.88
CDK5RAP3-219ENST00000580670 C15orf53Q8NAA6 179 aa9.57□□□□□ -0.88
CDK5RAP3-219ENST00000580670 A0A1B0GWB2 263 aa9.56□□□□□ -0.88
CDK5RAP3-219ENST00000580670 IGIPA6NJ69 53 aa9.56□□□□□ -0.88
CDK5RAP3-219ENST00000580670 PLNP26678 52 aa9.56□□□□□ -0.88
CDK5RAP3-219ENST00000580670 CHCHD5Q9BSY4 110 aa9.56□□□□□ -0.88
CDK5RAP3-219ENST00000580670 TTTY13Q9BZ97 58 aa9.56□□□□□ -0.88
CDK5RAP3-219ENST00000580670 LYPD5Q6UWN5 251 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 MAPKAPK5-AS1Q8N8E1 139 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 TMEM141Q96I45 108 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 TIMM17AQ99595 171 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 MRPL35Q9NZE8 188 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 UBE2D4Q9Y2X8 147 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 H7C423 109 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 GAGE6Q13070 117 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 LELP1Q5T871 98 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 CEMP1Q6PRD7 247 aaPredicted RBP9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 SPANXA1Q9NS26 97 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 NHP2Q9NX24 153 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 K7ERJ3 54 aa9.54□□□□□ -0.88
CDK5RAP3-219ENST00000580670 TIRAPP58753 221 aa9.54□□□□□ -0.88
CDK5RAP3-219ENST00000580670 OPRPNQ99935 248 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP3-219ENST00000580670 SPANXB1Q9NS25 103 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP3-219ENST00000580670 PYGO1Q9Y3Y4 419 aa9.54□□□□□ -0.88
CDK5RAP3-219ENST00000580670 RPL24P83731 157 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms