RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 APOMO95445 188 aa7.4□□□□□ -1.22
CDK5RAP3-216ENST00000579853 IGLV7-43P04211 117 aa7.4□□□□□ -1.22
CDK5RAP3-216ENST00000579853 RPL13AP40429 203 aaKnown RBP7.4□□□□□ -1.22
CDK5RAP3-216ENST00000579853 C9orf116Q5BN46 136 aaPredicted RBP7.4□□□□□ -1.22
CDK5RAP3-216ENST00000579853 C9orf62Q8N4C0 152 aa7.4□□□□□ -1.22
CDK5RAP3-216ENST00000579853 GATD1Q8NB37 220 aa7.4□□□□□ -1.22
CDK5RAP3-216ENST00000579853 BIN3Q9NQY0 253 aa7.4□□□□□ -1.22
CDK5RAP3-216ENST00000579853 SDHAF1A6NFY7 115 aa7.39□□□□□ -1.23
CDK5RAP3-216ENST00000579853 MALP21145 153 aa7.39□□□□□ -1.23
CDK5RAP3-216ENST00000579853 SMIM15Q7Z3B0 74 aa7.39□□□□□ -1.23
CDK5RAP3-216ENST00000579853 FAM213BQ8TBF2 198 aa7.39□□□□□ -1.23
CDK5RAP3-216ENST00000579853 CNFNQ9BYD5 112 aa7.39□□□□□ -1.23
CDK5RAP3-216ENST00000579853 BCL2P10415 239 aa7.38□□□□□ -1.23
CDK5RAP3-216ENST00000579853 TWIST1Q15672 202 aa7.38□□□□□ -1.23
CDK5RAP3-216ENST00000579853 CENPWQ5EE01 88 aa7.38□□□□□ -1.23
CDK5RAP3-216ENST00000579853 NUP35Q8NFH5 326 aa7.38□□□□□ -1.23
CDK5RAP3-216ENST00000579853 C11orf52Q96A22 123 aa7.38□□□□□ -1.23
CDK5RAP3-216ENST00000579853 C2orf48Q96LS8 159 aa7.38□□□□□ -1.23
CDK5RAP3-216ENST00000579853 CAMK2N2Q96S95 79 aa7.38□□□□□ -1.23
CDK5RAP3-216ENST00000579853 KRTAP4-8Q9BYQ9 185 aa7.38□□□□□ -1.23
CDK5RAP3-216ENST00000579853 CYTL1Q9NRR1 136 aa7.38□□□□□ -1.23
CDK5RAP3-216ENST00000579853 A0A1B0GV50 99 aa7.37□□□□□ -1.23
CDK5RAP3-216ENST00000579853 I3L3M4 83 aa7.37□□□□□ -1.23
CDK5RAP3-216ENST00000579853 COX7A2LO14548 114 aa7.37□□□□□ -1.23
CDK5RAP3-216ENST00000579853 PMCHP20382 165 aa7.37□□□□□ -1.23
CDK5RAP3-216ENST00000579853 CTRLP40313 264 aa7.37□□□□□ -1.23
CDK5RAP3-216ENST00000579853 GNG4P50150 75 aa7.37□□□□□ -1.23
CDK5RAP3-216ENST00000579853 UBE2D1P51668 147 aa7.37□□□□□ -1.23
CDK5RAP3-216ENST00000579853 RPL18AQ02543 176 aaKnown RBP7.37□□□□□ -1.23
CDK5RAP3-216ENST00000579853 PHF5AQ7RTV0 110 aaKnown RBP7.37□□□□□ -1.23
CDK5RAP3-216ENST00000579853 MRAP2Q96G30 205 aa7.37□□□□□ -1.23
CDK5RAP3-216ENST00000579853 MANBALQ9NQG1 85 aa7.37□□□□□ -1.23
CDK5RAP3-216ENST00000579853 A0A087WZ39 114 aa7.36□□□□□ -1.23
CDK5RAP3-216ENST00000579853 C1orf196B1AJZ1 125 aa7.36□□□□□ -1.23
CDK5RAP3-216ENST00000579853 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.36□□□□□ -1.23
CDK5RAP3-216ENST00000579853 ARPC5O15511 151 aa7.36□□□□□ -1.23
CDK5RAP3-216ENST00000579853 CCL20P78556 96 aa7.36□□□□□ -1.23
CDK5RAP3-216ENST00000579853 MEF2BQ02080 365 aaPredicted RBP7.36□□□□□ -1.23
CDK5RAP3-216ENST00000579853 RNF151Q2KHN1 245 aa7.36□□□□□ -1.23
CDK5RAP3-216ENST00000579853 RGS21Q2M5E4 152 aa7.36□□□□□ -1.23
CDK5RAP3-216ENST00000579853 MRPL52Q86TS9 123 aaKnown RBP7.36□□□□□ -1.23
CDK5RAP3-216ENST00000579853 RPL39LQ96EH5 51 aaKnown RBP7.36□□□□□ -1.23
CDK5RAP3-216ENST00000579853 CDC42SE2Q9NRR3 84 aa7.36□□□□□ -1.23
CDK5RAP3-216ENST00000579853 ESDP10768 282 aa7.35□□□□□ -1.23
CDK5RAP3-216ENST00000579853 TRBV6-5A0A0K0K1A5 114 aa7.34□□□□□ -1.23
CDK5RAP3-216ENST00000579853 BCL2L11O43521 198 aa7.34□□□□□ -1.23
CDK5RAP3-216ENST00000579853 SMAGPQ0VAQ4 97 aa7.34□□□□□ -1.23
CDK5RAP3-216ENST00000579853 IMMP2LQ96T52 175 aa7.34□□□□□ -1.23
CDK5RAP3-216ENST00000579853 KRTAP1-4P0C5Y4 121 aa7.33□□□□□ -1.24
CDK5RAP3-216ENST00000579853 CARHSP1Q9Y2V2 147 aaKnown RBP7.33□□□□□ -1.24
CDK5RAP3-216ENST00000579853 RAB19A4D1S5 217 aa7.32□□□□□ -1.24
CDK5RAP3-216ENST00000579853 F8WDY8 70 aa7.32□□□□□ -1.24
CDK5RAP3-216ENST00000579853 G3V3Q6 166 aa7.32□□□□□ -1.24
CDK5RAP3-216ENST00000579853 PDE6DO43924 150 aa7.32□□□□□ -1.24
CDK5RAP3-216ENST00000579853 NUDT10Q8NFP7 164 aa7.32□□□□□ -1.24
CDK5RAP3-216ENST00000579853 NUDT11Q96G61 164 aa7.32□□□□□ -1.24
CDK5RAP3-216ENST00000579853 ST20Q9HBF5 79 aa7.32□□□□□ -1.24
CDK5RAP3-216ENST00000579853 GNG13Q9P2W3 67 aa7.32□□□□□ -1.24
CDK5RAP3-216ENST00000579853 C7orf77A4D0Y5 90 aa7.31□□□□□ -1.24
CDK5RAP3-216ENST00000579853 TEX46H3BTG2 121 aa7.31□□□□□ -1.24
CDK5RAP3-216ENST00000579853 TSHBP01222 138 aa7.31□□□□□ -1.24
CDK5RAP3-216ENST00000579853 ZNF345Q14585 488 aa7.31□□□□□ -1.24
CDK5RAP3-216ENST00000579853 OR10D4PQ8NGN7 298 aa7.31□□□□□ -1.24
CDK5RAP3-216ENST00000579853 MRPL35Q9NZE8 188 aaKnown RBP7.31□□□□□ -1.24
CDK5RAP3-216ENST00000579853 CSDC2Q9Y534 153 aaKnown RBP7.31□□□□□ -1.24
CDK5RAP3-216ENST00000579853 SPAG11BQ08648 103 aa7.3□□□□□ -1.24
CDK5RAP3-216ENST00000579853 OPRPNQ99935 248 aaPredicted RBP7.3□□□□□ -1.24
CDK5RAP3-216ENST00000579853 RPP21Q9H633 154 aaKnown RBP7.3□□□□□ -1.24
CDK5RAP3-216ENST00000579853 MED9Q9NWA0 146 aa7.3□□□□□ -1.24
CDK5RAP3-216ENST00000579853 TMEM242Q9NWH2 141 aa7.3□□□□□ -1.24
CDK5RAP3-216ENST00000579853 TRBV20OR9-2A0A075B6H5 130 aa7.29□□□□□ -1.24
CDK5RAP3-216ENST00000579853 TRBV27A0A0K0K1C4 114 aa7.29□□□□□ -1.24
CDK5RAP3-216ENST00000579853 TMEM241Q24JQ0 296 aa7.29□□□□□ -1.24
CDK5RAP3-216ENST00000579853 TLX1NBP0CAT3 122 aa7.28□□□□□ -1.24
CDK5RAP3-216ENST00000579853 POLR2KP53803 58 aaKnown RBP7.28□□□□□ -1.24
CDK5RAP3-216ENST00000579853 UBE2BP63146 152 aa7.28□□□□□ -1.24
CDK5RAP3-216ENST00000579853 C5orf38Q86SI9 138 aa7.28□□□□□ -1.24
CDK5RAP3-216ENST00000579853 TRAV13-1A0A0B4J241 112 aa7.27□□□□□ -1.25
CDK5RAP3-216ENST00000579853 KANTRA0A1W2PQU2 76 aa7.27□□□□□ -1.25
CDK5RAP3-216ENST00000579853 NDUFA1O15239 70 aa7.27□□□□□ -1.25
CDK5RAP3-216ENST00000579853 FOXA3P55318 350 aaPredicted RBP7.27□□□□□ -1.25
CDK5RAP3-216ENST00000579853 FAM168BA1KXE4 195 aa7.26□□□□□ -1.25
CDK5RAP3-216ENST00000579853 FCER1GP30273 86 aa7.26□□□□□ -1.25
CDK5RAP3-216ENST00000579853 FAM19A5Q7Z5A7 132 aaPredicted RBP7.26□□□□□ -1.25
CDK5RAP3-216ENST00000579853 KRTAP11-1Q8IUC1 163 aa7.26□□□□□ -1.25
CDK5RAP3-216ENST00000579853 RNASE7Q9H1E1 156 aaKnown RBP7.26□□□□□ -1.25
CDK5RAP3-216ENST00000579853 A8MWL6 223 aa7.25□□□□□ -1.25
CDK5RAP3-216ENST00000579853 M0QXV9 152 aa7.25□□□□□ -1.25
CDK5RAP3-216ENST00000579853 VCYO14598 125 aa7.25□□□□□ -1.25
CDK5RAP3-216ENST00000579853 TSPAN13O95857 204 aa7.25□□□□□ -1.25
CDK5RAP3-216ENST00000579853 ORAOV1Q8WV07 137 aa7.25□□□□□ -1.25
CDK5RAP3-216ENST00000579853 TMEM18Q96B42 140 aa7.25□□□□□ -1.25
CDK5RAP3-216ENST00000579853 BORCS7Q96B45 105 aa7.25□□□□□ -1.25
CDK5RAP3-216ENST00000579853 UBE2D4Q9Y2X8 147 aa7.25□□□□□ -1.25
CDK5RAP3-216ENST00000579853 HMSDA8MTL9 139 aa7.24□□□□□ -1.25
CDK5RAP3-216ENST00000579853 ZNF861PO60384 105 aa7.24□□□□□ -1.25
CDK5RAP3-216ENST00000579853 PPP1R17O96001 155 aa7.24□□□□□ -1.25
CDK5RAP3-216ENST00000579853 KIR2DL4Q99706 377 aa7.24□□□□□ -1.25
CDK5RAP3-216ENST00000579853 TIMM21Q9BVV7 248 aa7.24□□□□□ -1.25
CDK5RAP3-216ENST00000579853 MUC17Q685J3 4493 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms