RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 CYYR1Q96J86 154 aa4.2□□□□□ -1.74
COPS3-216ENST00000579716 COL11A1P12107 1806 aaPredicted RBP4.2□□□□□ -1.74
COPS3-216ENST00000579716 PIKFYVEQ9Y2I7 2098 aa4.2□□□□□ -1.74
COPS3-216ENST00000579716 GON4LQ3T8J9 2241 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 SCN3AQ9NY46 2000 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 IGHV3-64A0A075B6Q5 118 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 IGHV3OR16-8A0A075B7F1 116 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 SMIM27A0A1W2PRY6 76 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 ODF3BA8MYP8 253 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 RTL8CO15255 209 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 IGLV7-43P04211 117 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 Q6ZR54 194 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 ORMDL1Q9P0S3 153 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 SNURFQ9Y675 71 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 UBR3Q6ZT12 1888 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 PTPRSQ13332 1948 aa4.19□□□□□ -1.74
COPS3-216ENST00000579716 TIAM2Q8IVF5 1701 aa4.18□□□□□ -1.74
COPS3-216ENST00000579716 IGKV3D-11A0A0A0MRZ8 115 aa4.18□□□□□ -1.74
COPS3-216ENST00000579716 DEFB113Q30KQ7 82 aa4.18□□□□□ -1.74
COPS3-216ENST00000579716 LYPD6Q86Y78 171 aa4.18□□□□□ -1.74
COPS3-216ENST00000579716 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
COPS3-216ENST00000579716 MUC4Q99102 2169 aa4.17□□□□□ -1.74
COPS3-216ENST00000579716 ANKRD36A6QL64 1941 aa4.17□□□□□ -1.74
COPS3-216ENST00000579716 A8MU10 97 aa4.17□□□□□ -1.74
COPS3-216ENST00000579716 LINC00483Q53H64 154 aa4.17□□□□□ -1.74
COPS3-216ENST00000579716 ZNF833PQ6ZTB9 187 aa4.17□□□□□ -1.74
COPS3-216ENST00000579716 Q86TA4 180 aa4.17□□□□□ -1.74
COPS3-216ENST00000579716 UBALD1Q8TB05 177 aa4.17□□□□□ -1.74
COPS3-216ENST00000579716 AMELXQ99217 191 aa4.17□□□□□ -1.74
COPS3-216ENST00000579716 KIF25-AS1Q9Y6Z4 181 aa4.17□□□□□ -1.74
COPS3-216ENST00000579716 V9GYV3 84 aa4.17□□□□□ -1.74
COPS3-216ENST00000579716 SVILO95425 2214 aa4.17□□□□□ -1.74
COPS3-216ENST00000579716 EML5Q05BV3 1969 aa4.16□□□□□ -1.74
COPS3-216ENST00000579716 ZNF407Q9C0G0 2248 aa4.16□□□□□ -1.74
COPS3-216ENST00000579716 CTXND1A0A1B0GTU2 59 aa4.16□□□□□ -1.74
COPS3-216ENST00000579716 A0A1W2PNM2 257 aa4.16□□□□□ -1.74
COPS3-216ENST00000579716 C10orf142B7Z368 130 aa4.16□□□□□ -1.74
COPS3-216ENST00000579716 GAS8-AS1O95177 125 aa4.16□□□□□ -1.74
COPS3-216ENST00000579716 HMGA1P17096 107 aaKnown RBP4.16□□□□□ -1.74
COPS3-216ENST00000579716 DMAC1Q96GE9 116 aa4.16□□□□□ -1.74
COPS3-216ENST00000579716 SIP14410 1827 aa4.16□□□□□ -1.74
COPS3-216ENST00000579716 A0A087WVE0 104 aa4.15□□□□□ -1.75
COPS3-216ENST00000579716 TRAV12-1A0A0B4J245 112 aa4.15□□□□□ -1.75
COPS3-216ENST00000579716 IGKV3D-7A0A0C4DH55 119 aa4.15□□□□□ -1.75
COPS3-216ENST00000579716 A0A0J9YY99 117 aa4.15□□□□□ -1.75
COPS3-216ENST00000579716 TRBV6-5A0A0K0K1A5 114 aa4.15□□□□□ -1.75
COPS3-216ENST00000579716 IGHV3-30P01768 117 aa4.15□□□□□ -1.75
COPS3-216ENST00000579716 IGHV3-30-5P0DP03 117 aa4.15□□□□□ -1.75
COPS3-216ENST00000579716 PLNP26678 52 aa4.15□□□□□ -1.75
COPS3-216ENST00000579716 C1orf137Q5JT78 98 aa4.15□□□□□ -1.75
COPS3-216ENST00000579716 Q9BRP9 147 aa4.15□□□□□ -1.75
COPS3-216ENST00000579716 MINOS1-NBL1R4GNA1 71 aa4.15□□□□□ -1.75
COPS3-216ENST00000579716 DUOX1Q9NRD9 1551 aa4.14□□□□□ -1.75
COPS3-216ENST00000579716 A0A087WYN8 130 aa4.14□□□□□ -1.75
COPS3-216ENST00000579716 A0A1B0GUT8 65 aa4.14□□□□□ -1.75
COPS3-216ENST00000579716 P0C880 135 aa4.14□□□□□ -1.75
COPS3-216ENST00000579716 ERHP84090 104 aaKnown RBP4.14□□□□□ -1.75
COPS3-216ENST00000579716 KPRPQ5T749 579 aaPredicted RBP4.14□□□□□ -1.75
COPS3-216ENST00000579716 CSAG1Q6PB30 78 aa4.14□□□□□ -1.75
COPS3-216ENST00000579716 LINC00167Q96N53 147 aa4.14□□□□□ -1.75
COPS3-216ENST00000579716 RNF5Q99942 180 aa4.14□□□□□ -1.75
COPS3-216ENST00000579716 DEPDC5O75140 1603 aa4.13□□□□□ -1.75
COPS3-216ENST00000579716 GTF3C1Q12789 2109 aa4.13□□□□□ -1.75
COPS3-216ENST00000579716 NDUFB1O75438 58 aa4.13□□□□□ -1.75
COPS3-216ENST00000579716 PPP1R17O96001 155 aa4.13□□□□□ -1.75
COPS3-216ENST00000579716 IGLV1-47P01700 117 aa4.13□□□□□ -1.75
COPS3-216ENST00000579716 SPAG11BQ08648 103 aa4.13□□□□□ -1.75
COPS3-216ENST00000579716 SPAG11AQ6PDA7 123 aa4.13□□□□□ -1.75
COPS3-216ENST00000579716 NOTCH3Q9UM47 2321 aa4.12□□□□□ -1.75
COPS3-216ENST00000579716 A0A1W2PPR1 153 aa4.12□□□□□ -1.75
COPS3-216ENST00000579716 GIG44P09565 113 aaPredicted RBP4.12□□□□□ -1.75
COPS3-216ENST00000579716 KRTAP26-1Q6PEX3 210 aa4.12□□□□□ -1.75
COPS3-216ENST00000579716 Q8NAQ8 132 aa4.12□□□□□ -1.75
COPS3-216ENST00000579716 WFDC6Q9BQY6 131 aa4.12□□□□□ -1.75
COPS3-216ENST00000579716 LRRC37A3O60309 1634 aa4.12□□□□□ -1.75
COPS3-216ENST00000579716 DDX60Q8IY21 1712 aaKnown RBP4.12□□□□□ -1.75
COPS3-216ENST00000579716 MYOFQ9NZM1 2061 aa4.12□□□□□ -1.75
COPS3-216ENST00000579716 IGLV2-18A0A075B6J9 118 aa4.11□□□□□ -1.75
COPS3-216ENST00000579716 A0A1B0GU33 70 aa4.11□□□□□ -1.75
COPS3-216ENST00000579716 WISP3O95389 354 aaPredicted RBP4.11□□□□□ -1.75
COPS3-216ENST00000579716 C9orf129Q5T035 196 aaKnown RBP4.11□□□□□ -1.75
COPS3-216ENST00000579716 LYPD1Q8N2G4 141 aa4.11□□□□□ -1.75
COPS3-216ENST00000579716 LITAFQ99732 161 aa4.11□□□□□ -1.75
COPS3-216ENST00000579716 LHFPL6Q9Y693 200 aa4.11□□□□□ -1.75
COPS3-216ENST00000579716 TOGARAM1Q9Y4F4 1720 aa4.11□□□□□ -1.75
COPS3-216ENST00000579716 DLEC1Q9Y238 1755 aa4.11□□□□□ -1.75
COPS3-216ENST00000579716 A0A1B0GUV1 79 aa4.1□□□□□ -1.75
COPS3-216ENST00000579716 CLPSL1A2RUU4 121 aa4.1□□□□□ -1.75
COPS3-216ENST00000579716 TMEM263Q8WUH6 116 aaKnown RBP4.1□□□□□ -1.75
COPS3-216ENST00000579716 MRPL36Q9P0J6 103 aaKnown RBP4.1□□□□□ -1.75
COPS3-216ENST00000579716 BCORQ6W2J9 1755 aa4.09□□□□□ -1.75
COPS3-216ENST00000579716 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
COPS3-216ENST00000579716 NUPR2A6NF83 97 aa4.09□□□□□ -1.75
COPS3-216ENST00000579716 NREPQ16612 68 aa4.09□□□□□ -1.75
COPS3-216ENST00000579716 DOT1LQ8TEK3 1739 aa4.09□□□□□ -1.76
COPS3-216ENST00000579716 SHROOM3Q8TF72 1996 aa4.09□□□□□ -1.76
COPS3-216ENST00000579716 DEFB116Q30KQ4 102 aa4.08□□□□□ -1.76
COPS3-216ENST00000579716 UBL5Q9BZL1 73 aa4.08□□□□□ -1.76
COPS3-216ENST00000579716 MED13Q9UHV7 2174 aa4.08□□□□□ -1.76
COPS3-216ENST00000579716 A0A0J9YX75 114 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms