RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 FAM231DQ6ZW35 169 aa5.86□□□□□ -1.47
CDK5RAP3-211ENST00000578996 SPACA4Q8TDM5 124 aa5.86□□□□□ -1.47
CDK5RAP3-211ENST00000578996 SMIM7Q9BQ49 75 aa5.86□□□□□ -1.47
CDK5RAP3-211ENST00000578996 TMEM242Q9NWH2 141 aa5.86□□□□□ -1.47
CDK5RAP3-211ENST00000578996 H7C423 109 aa5.85□□□□□ -1.47
CDK5RAP3-211ENST00000578996 GAS8-AS1O95177 125 aa5.85□□□□□ -1.47
CDK5RAP3-211ENST00000578996 CIRBPQ14011 172 aaKnown RBP5.85□□□□□ -1.47
CDK5RAP3-211ENST00000578996 OR5A1Q8NGJ0 315 aa5.85□□□□□ -1.47
CDK5RAP3-211ENST00000578996 C7orf33Q8WU49 177 aa5.85□□□□□ -1.47
CDK5RAP3-211ENST00000578996 MRAP2Q96G30 205 aa5.85□□□□□ -1.47
CDK5RAP3-211ENST00000578996 RNF185Q96GF1 192 aa5.85□□□□□ -1.47
CDK5RAP3-211ENST00000578996 ST20Q9HBF5 79 aa5.85□□□□□ -1.47
CDK5RAP3-211ENST00000578996 NAT8Q9UHE5 227 aa5.85□□□□□ -1.47
CDK5RAP3-211ENST00000578996 PLA2G2DQ9UNK4 145 aa5.85□□□□□ -1.47
CDK5RAP3-211ENST00000578996 A0A1B0GUT8 65 aa5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 C7orf77A4D0Y5 90 aa5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 ZNF727A8MUV8 499 aa5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 HIGD1CA8MV81 97 aa5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 PHOX2AO14813 284 aa5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 CCL25O15444 150 aa5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 SCO1O75880 301 aa5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 ZNF25P17030 456 aaPredicted RBP5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 FOXI1Q12951 378 aa5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 TMEM241Q24JQ0 296 aa5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 CT83Q5H943 113 aa5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 PRSS3P2Q8NHM4 247 aa5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 SMCO4Q9NRQ5 59 aa5.84□□□□□ -1.47
CDK5RAP3-211ENST00000578996 HMCN2Q8NDA2 5059 aa5.84□□□□□ -1.48
CDK5RAP3-211ENST00000578996 GVQW2A0A096LPI5 108 aaPredicted RBP5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 TRBV6-5A0A0K0K1A5 114 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 LINC00959A0A1B0GUT2 108 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 FAM231BA6NCW3 169 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 SMKR1H3BMG3 65 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 TSHBP01222 138 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 SS18Q15532 418 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 Q6ZRU5 148 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 LINC01551Q86U37 167 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 AMN1Q8IY45 258 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 STPG4Q8N801 248 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 TSKUQ8WUA8 353 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 LINC00526Q96FQ7 95 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 CTDSP1Q9GZU7 261 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 TMEM191AQ9H0A3 160 aa5.83□□□□□ -1.48
CDK5RAP3-211ENST00000578996 A0A096LNI7 61 aa5.82□□□□□ -1.48
CDK5RAP3-211ENST00000578996 FCER1GP30273 86 aa5.82□□□□□ -1.48
CDK5RAP3-211ENST00000578996 PLAC8Q9NZF1 115 aa5.82□□□□□ -1.48
CDK5RAP3-211ENST00000578996 IGHV1-58A0A0C4DH39 117 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 ZNF561-AS1K7EIQ3 104 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 PPP1R2P9O14990 202 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 MT-ND4LP03901 98 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 ESDP10768 282 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 RAB4AP20338 218 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 RPL23P62829 140 aaKnown RBP5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 RIGQ13278 110 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 ZNF664Q8N3J9 261 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 ANAPC16Q96DE5 110 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 CARD19Q96LW7 228 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 YPEL4Q96NS1 127 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 RPS10P5Q9NQ39 176 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 OSTCQ9NRP0 149 aa5.81□□□□□ -1.48
CDK5RAP3-211ENST00000578996 MALP21145 153 aa5.8□□□□□ -1.48
CDK5RAP3-211ENST00000578996 POLR2KP53803 58 aaKnown RBP5.8□□□□□ -1.48
CDK5RAP3-211ENST00000578996 RNASE13Q5GAN3 156 aaKnown RBP5.8□□□□□ -1.48
CDK5RAP3-211ENST00000578996 NUP35Q8NFH5 326 aa5.8□□□□□ -1.48
CDK5RAP3-211ENST00000578996 IMMP2LQ96T52 175 aa5.8□□□□□ -1.48
CDK5RAP3-211ENST00000578996 CDC42SE2Q9NRR3 84 aa5.8□□□□□ -1.48
CDK5RAP3-211ENST00000578996 TRBV27A0A0K0K1C4 114 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 COLCA2A8K830 154 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 VCYO14598 125 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 MT1HL1P0DM35 61 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 ADIRFQ15847 76 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 CD164L2Q6UWJ8 174 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 MRPL52Q86TS9 123 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 CBLN2Q8IUK8 224 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 ISOC2Q96AB3 205 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 KIR2DL4Q99706 377 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 LINC00474Q9P2X8 69 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 NAT8BQ9UHF3 227 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 PKIGQ9Y2B9 76 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 V9GYV3 84 aa5.79□□□□□ -1.48
CDK5RAP3-211ENST00000578996 UBR4Q5T4S7 5183 aa5.78□□□□□ -1.48
CDK5RAP3-211ENST00000578996 TRBV24-1A0A075B6N3 115 aa5.78□□□□□ -1.48
CDK5RAP3-211ENST00000578996 TRAV13-1A0A0B4J241 112 aa5.78□□□□□ -1.48
CDK5RAP3-211ENST00000578996 PPP1R17O96001 155 aa5.78□□□□□ -1.48
CDK5RAP3-211ENST00000578996 CAMPP49913 170 aa5.78□□□□□ -1.48
CDK5RAP3-211ENST00000578996 SUMO2P61956 95 aaKnown RBP5.78□□□□□ -1.48
CDK5RAP3-211ENST00000578996 PRR3P79522 188 aaKnown RBP5.78□□□□□ -1.48
CDK5RAP3-211ENST00000578996 SYCNQ0VAF6 134 aa5.78□□□□□ -1.48
CDK5RAP3-211ENST00000578996 SMAGPQ0VAQ4 97 aa5.78□□□□□ -1.48
CDK5RAP3-211ENST00000578996 IGLV4-69A0A075B6H9 119 aa5.77□□□□□ -1.49
CDK5RAP3-211ENST00000578996 TRAV9-1A0A075B6T8 112 aa5.77□□□□□ -1.49
CDK5RAP3-211ENST00000578996 C1orf196B1AJZ1 125 aa5.77□□□□□ -1.49
CDK5RAP3-211ENST00000578996 COX7A2LO14548 114 aa5.77□□□□□ -1.49
CDK5RAP3-211ENST00000578996 GAGE2BQ13066 116 aa5.77□□□□□ -1.49
CDK5RAP3-211ENST00000578996 MRPL51Q4U2R6 128 aaKnown RBP5.77□□□□□ -1.49
CDK5RAP3-211ENST00000578996 Q6ZUT4 128 aa5.77□□□□□ -1.49
CDK5RAP3-211ENST00000578996 NRACQ8N912 160 aa5.77□□□□□ -1.49
CDK5RAP3-211ENST00000578996 CAMK2N2Q96S95 79 aa5.77□□□□□ -1.49
CDK5RAP3-211ENST00000578996 UBE2D4Q9Y2X8 147 aa5.77□□□□□ -1.49
CDK5RAP3-211ENST00000578996 CKS2P33552 79 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms