RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 RRN3P1Q2M238 152 aa3.45□□□□□ -1.86
IFT20-205ENST00000578009 TMEM97Q5BJF2 176 aa3.45□□□□□ -1.86
IFT20-205ENST00000578009 ZC2HC1BQ5TFG8 222 aa3.45□□□□□ -1.86
IFT20-205ENST00000578009 C2orf91Q6ZV80 131 aa3.45□□□□□ -1.86
IFT20-205ENST00000578009 NFE4Q86UQ8 179 aa3.45□□□□□ -1.86
IFT20-205ENST00000578009 OR4C5Q8NGB2 326 aa3.45□□□□□ -1.86
IFT20-205ENST00000578009 KIR2DL5BQ8NHK3 375 aa3.45□□□□□ -1.86
IFT20-205ENST00000578009 TEP1Q99973 2627 aaKnown RBP3.45□□□□□ -1.86
IFT20-205ENST00000578009 AKAP9Q99996 3911 aa3.45□□□□□ -1.86
IFT20-205ENST00000578009 TRGV1A0A0A0MS02 117 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 TRBV6-4A0A1B0GX49 114 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 PLAC8L1A1L4L8 177 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 C11orf86A6NJI1 115 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 E9PLD3 99 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 HINT1P49773 126 aaPredicted RBP3.44□□□□□ -1.86
IFT20-205ENST00000578009 HERVK_113P61574 105 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 MRPS36P82909 103 aaKnown RBP3.44□□□□□ -1.86
IFT20-205ENST00000578009 GAGE1Q13065 139 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 COTL1Q14019 142 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 MPV17L2Q567V2 206 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 BVES-AS1Q5T3Y7 98 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 HIST2H2BDQ6DRA6 164 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 NEGR1Q7Z3B1 354 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 GTSCR1Q86UQ5 136 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 ORAOV1Q8WV07 137 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 SPANXA1Q9NS26 97 aa3.44□□□□□ -1.86
IFT20-205ENST00000578009 MRPL16Q9NX20 251 aaKnown RBP3.44□□□□□ -1.86
IFT20-205ENST00000578009 ZMAT5Q9UDW3 170 aaKnown RBP3.44□□□□□ -1.86
IFT20-205ENST00000578009 CSDC2Q9Y534 153 aaKnown RBP3.44□□□□□ -1.86
IFT20-205ENST00000578009 TENM1Q9UKZ4 2725 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 F8P00451 2351 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 IGLV4-69A0A075B6H9 119 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 IGLV4-3A0A075B6K6 122 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 TRBV7-3A0A075B6L6 115 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 IGKV2D-26A0A0A0MRZ7 120 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 H7C423 109 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 K7EQD1 137 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 PRM2P04554 102 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 NMUP48645 174 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 RPL39P62891 51 aaKnown RBP3.43□□□□□ -1.86
IFT20-205ENST00000578009 BATFQ16520 125 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 Q6ZTI0 123 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 DAZ4Q86SG3 579 aaKnown RBP3.43□□□□□ -1.86
IFT20-205ENST00000578009 PCP2Q8IVA1 136 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 LINC00612Q8N6U2 182 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.43□□□□□ -1.86
IFT20-205ENST00000578009 OR11H2Q8NH07 326 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 AMELXQ99217 191 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 GTSF1LQ9H1H1 148 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 VCX2Q9H322 139 aa3.43□□□□□ -1.86
IFT20-205ENST00000578009 NOP10Q9NPE3 64 aaKnown RBP3.43□□□□□ -1.86
IFT20-205ENST00000578009 DAZ3Q9NR90 486 aaKnown RBP3.43□□□□□ -1.86
IFT20-205ENST00000578009 TRBV25-1A0A075B6N4 114 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 IGHV3OR16-12A0A075B7B8 117 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 IGHV3-73A0A0B4J1V6 119 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 MYMXA0A1B0GTQ4 84 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 A6NDN8 102 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 LYRM9A8MSI8 78 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 RPL35AP18077 110 aaKnown RBP3.42□□□□□ -1.86
IFT20-205ENST00000578009 APOC4P55056 127 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 UBE2D3P61077 147 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 UBE2D2P62837 147 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 FAM104AQ969W3 186 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 CHCHD7Q9BUK0 85 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 NBPF19A0A087WUL8 3843 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 VWFP04275 2813 aa3.42□□□□□ -1.86
IFT20-205ENST00000578009 ZNF469Q96JG9 3925 aaPredicted RBP3.41□□□□□ -1.86
IFT20-205ENST00000578009 TRGV2A0A075B6R0 118 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 TINCRA0A1B0GVN0 87 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 GAGE12JA6NER3 117 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 H3BRM9 83 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 FAM19A3Q7Z5A8 133 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 SBSPONQ8IVN8 264 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 MAPKAPK5-AS1Q8N8E1 139 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 SLC25A29Q8N8R3 303 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 ZNRF2Q8NHG8 242 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 PLEKHB2Q96CS7 222 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 PRADC1Q9BSG0 188 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 CHAC1Q9BUX1 264 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 WFDC10AQ9H1F0 79 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 Q9UF83 564 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 UBE2D4Q9Y2X8 147 aa3.41□□□□□ -1.86
IFT20-205ENST00000578009 TRAV8-6A0A0B4J262 113 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 TMEM223A0PJW6 202 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 TAX1BP3O14907 124 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 LEPROTO15243 131 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 GAGE7O76087 117 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 GAGE12FP0CL80 117 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 GAGE12GP0CL81 117 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 GAGE12IP0CL82 117 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 SMIM13P0DJ93 91 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 LINC00694P0DN24 101 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 ZNF22P17026 224 aaPredicted RBP3.4□□□□□ -1.87
IFT20-205ENST00000578009 ZNF25P17030 456 aaPredicted RBP3.4□□□□□ -1.87
IFT20-205ENST00000578009 CEND1Q8N111 149 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 LINC00469Q8N7U9 141 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 SPANXB1Q9NS25 103 aaPredicted RBP3.4□□□□□ -1.87
IFT20-205ENST00000578009 TP73-AS1Q9UF72 201 aa3.4□□□□□ -1.87
IFT20-205ENST00000578009 NACAE9PAV3 2078 aa3.39□□□□□ -1.87
IFT20-205ENST00000578009 IGLV5-45A0A087WSX0 123 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms