RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 NXPH4O95158 308 aa10.11□□□□□ -0.79
RNF43-202ENST00000577625 PAPPA-AS1Q5QFB9 102 aa10.11□□□□□ -0.79
RNF43-202ENST00000577625 ATRQ13535 2644 aa10.1□□□□□ -0.79
RNF43-202ENST00000577625 A0A1B0GX51 115 aa10.1□□□□□ -0.79
RNF43-202ENST00000577625 J3KT08 172 aa10.1□□□□□ -0.79
RNF43-202ENST00000577625 A0A0B4J2C4 111 aa10.09□□□□□ -0.79
RNF43-202ENST00000577625 ZNF56Q15929 161 aa10.09□□□□□ -0.79
RNF43-202ENST00000577625 TMEM101Q96IK0 257 aa10.09□□□□□ -0.79
RNF43-202ENST00000577625 SPANXCQ9NY87 97 aa10.09□□□□□ -0.79
RNF43-202ENST00000577625 RBMY1BA6NDE4 496 aaKnown RBP10.09□□□□□ -0.79
RNF43-202ENST00000577625 RBMY1EA6NEQ0 496 aaKnown RBP10.09□□□□□ -0.79
RNF43-202ENST00000577625 SPRY2O43597 315 aa10.09□□□□□ -0.79
RNF43-202ENST00000577625 RBMY1DP0C7P1 496 aaKnown RBP10.09□□□□□ -0.79
RNF43-202ENST00000577625 ODF3L2Q3SX64 289 aa10.09□□□□□ -0.79
RNF43-202ENST00000577625 C9orf153Q5TBE3 101 aa10.09□□□□□ -0.79
RNF43-202ENST00000577625 C3orf22Q8N5N4 141 aa10.09□□□□□ -0.79
RNF43-202ENST00000577625 TMEM263Q8WUH6 116 aaKnown RBP10.09□□□□□ -0.79
RNF43-202ENST00000577625 IMUPQ9GZP8 106 aa10.09□□□□□ -0.79
RNF43-202ENST00000577625 TEP1Q99973 2627 aaKnown RBP10.09□□□□□ -0.79
RNF43-202ENST00000577625 IGHV1OR15-1A0A075B7D0 117 aa10.08□□□□□ -0.8
RNF43-202ENST00000577625 DPH3P1Q9H4G8 78 aa10.08□□□□□ -0.8
RNF43-202ENST00000577625 IGHV3-16A0A0C4DH30 117 aa10.08□□□□□ -0.8
RNF43-202ENST00000577625 C9orf85Q96MD7 179 aa10.08□□□□□ -0.8
RNF43-202ENST00000577625 LOC107984640A0A0U1RRK4 108 aa10.07□□□□□ -0.8
RNF43-202ENST00000577625 A4D1N5 150 aa10.07□□□□□ -0.8
RNF43-202ENST00000577625 C2orf66Q6UXQ4 117 aa10.07□□□□□ -0.8
RNF43-202ENST00000577625 VWFP04275 2813 aa10.07□□□□□ -0.8
RNF43-202ENST00000577625 UQCRQO14949 82 aa10.07□□□□□ -0.8
RNF43-202ENST00000577625 RBMY1A1P0DJD3 496 aaKnown RBP10.07□□□□□ -0.8
RNF43-202ENST00000577625 RBMY1CP0DJD4 496 aa10.07□□□□□ -0.8
RNF43-202ENST00000577625 RBMY1FQ15415 496 aaKnown RBP10.07□□□□□ -0.8
RNF43-202ENST00000577625 DEFB121Q5J5C9 76 aa10.07□□□□□ -0.8
RNF43-202ENST00000577625 C2orf82Q6UX34 121 aa10.07□□□□□ -0.8
RNF43-202ENST00000577625 FAM19A5Q7Z5A7 132 aaPredicted RBP10.07□□□□□ -0.8
RNF43-202ENST00000577625 FAM236AA0A1B0GUQ0 79 aa10.06□□□□□ -0.8
RNF43-202ENST00000577625 FAM236BA0A1B0GV22 79 aa10.06□□□□□ -0.8
RNF43-202ENST00000577625 H3BT86 120 aa10.06□□□□□ -0.8
RNF43-202ENST00000577625 IGLV1-51P01701 117 aa10.06□□□□□ -0.8
RNF43-202ENST00000577625 EMP1P54849 157 aa10.06□□□□□ -0.8
RNF43-202ENST00000577625 SUMO2P61956 95 aaKnown RBP10.06□□□□□ -0.8
RNF43-202ENST00000577625 HERVK_113P63121 156 aa10.06□□□□□ -0.8
RNF43-202ENST00000577625 C14orf178Q8N769 122 aaPredicted RBP10.06□□□□□ -0.8
RNF43-202ENST00000577625 POM121L12Q8N7R1 296 aa10.06□□□□□ -0.8
RNF43-202ENST00000577625 NOTCH3Q9UM47 2321 aa10.06□□□□□ -0.8
RNF43-202ENST00000577625 TRBV30A0A0K0K1B3 111 aa10.05□□□□□ -0.8
RNF43-202ENST00000577625 C11orf86A6NJI1 115 aa10.05□□□□□ -0.8
RNF43-202ENST00000577625 EIF4EBP3O60516 100 aaPredicted RBP10.05□□□□□ -0.8
RNF43-202ENST00000577625 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.05□□□□□ -0.8
RNF43-202ENST00000577625 TRGV11A0A075B6L2 103 aa10.05□□□□□ -0.8
RNF43-202ENST00000577625 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.05□□□□□ -0.8
RNF43-202ENST00000577625 RPS28P62857 69 aaKnown RBP10.05□□□□□ -0.8
RNF43-202ENST00000577625 Q1RN00 199 aa10.05□□□□□ -0.8
RNF43-202ENST00000577625 TMEM170BQ5T4T1 132 aa10.05□□□□□ -0.8
RNF43-202ENST00000577625 OR13C6PQ8NH95 151 aa10.05□□□□□ -0.8
RNF43-202ENST00000577625 LINC00526Q96FQ7 95 aa10.05□□□□□ -0.8
RNF43-202ENST00000577625 IGLV4-69A0A075B6H9 119 aa10.04□□□□□ -0.8
RNF43-202ENST00000577625 H7C2G1 150 aa10.04□□□□□ -0.8
RNF43-202ENST00000577625 LINC00482Q8N8I6 264 aa10.04□□□□□ -0.8
RNF43-202ENST00000577625 KIF25-AS1Q9Y6Z4 181 aa10.04□□□□□ -0.8
RNF43-202ENST00000577625 PF4P02776 101 aa10.04□□□□□ -0.8
RNF43-202ENST00000577625 ATP5G1P05496 136 aa10.04□□□□□ -0.8
RNF43-202ENST00000577625 CRYGDP07320 174 aa10.04□□□□□ -0.8
RNF43-202ENST00000577625 TSPEAR-AS2P59090 65 aa10.04□□□□□ -0.8
RNF43-202ENST00000577625 PMVKQ15126 192 aa10.03□□□□□ -0.8
RNF43-202ENST00000577625 AMELXQ99217 191 aa10.03□□□□□ -0.8
RNF43-202ENST00000577625 LINC00315P59091 139 aa10.02□□□□□ -0.8
RNF43-202ENST00000577625 H7C423 109 aa10.02□□□□□ -0.81
RNF43-202ENST00000577625 MGPP08493 103 aa10.02□□□□□ -0.81
RNF43-202ENST00000577625 LGALS3P17931 250 aaKnown RBP10.02□□□□□ -0.81
RNF43-202ENST00000577625 CMC4P56277 68 aaPredicted RBP10.02□□□□□ -0.81
RNF43-202ENST00000577625 J3QQQ9 107 aa10.01□□□□□ -0.81
RNF43-202ENST00000577625 ACYP1P07311 99 aa10.01□□□□□ -0.81
RNF43-202ENST00000577625 STHQ8IWL8 128 aa10.01□□□□□ -0.81
RNF43-202ENST00000577625 TRIAP1O43715 76 aa10.01□□□□□ -0.81
RNF43-202ENST00000577625 PPP1R17O96001 155 aa10.01□□□□□ -0.81
RNF43-202ENST00000577625 BEAN1Q3B7T3 259 aa10.01□□□□□ -0.81
RNF43-202ENST00000577625 LINC00467Q9BRT7 94 aa10.01□□□□□ -0.81
RNF43-202ENST00000577625 JPT2Q9H910 190 aa10.01□□□□□ -0.81
RNF43-202ENST00000577625 INSP01308 110 aa10□□□□□ -0.81
RNF43-202ENST00000577625 MUSTN1Q8IVN3 82 aa9.99□□□□□ -0.81
RNF43-202ENST00000577625 C19orf73Q9NVV2 129 aa9.99□□□□□ -0.81
RNF43-202ENST00000577625 RPL39LQ96EH5 51 aaKnown RBP9.99□□□□□ -0.81
RNF43-202ENST00000577625 A0A087WWL8 130 aa9.98□□□□□ -0.81
RNF43-202ENST00000577625 CYSRT1A8MQ03 144 aa9.98□□□□□ -0.81
RNF43-202ENST00000577625 ZNF876PQ49A33 203 aa9.98□□□□□ -0.81
RNF43-202ENST00000577625 CEMP1Q6PRD7 247 aaPredicted RBP9.98□□□□□ -0.81
RNF43-202ENST00000577625 SPATA3Q8NHX4 192 aa9.98□□□□□ -0.81
RNF43-202ENST00000577625 WFDC10AQ9H1F0 79 aa9.98□□□□□ -0.81
RNF43-202ENST00000577625 NACAE9PAV3 2078 aa9.98□□□□□ -0.81
RNF43-202ENST00000577625 TSHBP01222 138 aa9.98□□□□□ -0.81
RNF43-202ENST00000577625 HTN1P15515 57 aa9.98□□□□□ -0.81
RNF43-202ENST00000577625 TMEM141Q96I45 108 aa9.98□□□□□ -0.81
RNF43-202ENST00000577625 PRM2P04554 102 aa9.97□□□□□ -0.81
RNF43-202ENST00000577625 COX6CP09669 75 aa9.97□□□□□ -0.81
RNF43-202ENST00000577625 ZNF415Q09FC8 603 aa9.97□□□□□ -0.81
RNF43-202ENST00000577625 SUMO4Q6EEV6 95 aa9.97□□□□□ -0.81
RNF43-202ENST00000577625 XCL2Q9UBD3 114 aa9.97□□□□□ -0.81
RNF43-202ENST00000577625 TMEM223A0PJW6 202 aa9.97□□□□□ -0.81
RNF43-202ENST00000577625 IGIPA6NJ69 53 aa9.97□□□□□ -0.81
RNF43-202ENST00000577625 CRYGAP11844 174 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms