RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 LINC00474Q9P2X8 69 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 LENEPQ9Y5L5 61 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 PRDM2Q13029 1718 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 MED12Q93074 2177 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 EDC4Q6P2E9 1401 aaKnown RBP0.54□□□□□ -2.32
COPS3-213ENST00000577210 C10orf71Q711Q0 1435 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 MED14O60244 1454 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 ADGRL2O95490 1459 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 ERVK-7P63135 1459 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 CCDC141Q6ZP82 1450 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 MAGI2Q86UL8 1455 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 TEX14Q8IWB6 1497 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 ARHGAP35Q9NRY4 1499 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 SHANK2Q9UPX8 1470 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 RAPGEF2Q9Y4G8 1499 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 EPRSP07814 1512 aaKnown RBP0.54□□□□□ -2.32
COPS3-213ENST00000577210 UGGT2Q9NYU1 1516 aa0.54□□□□□ -2.32
COPS3-213ENST00000577210 SAMD9Q5K651 1589 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 BAZ1AQ9NRL2 1556 aaPredicted RBP0.53□□□□□ -2.32
COPS3-213ENST00000577210 SPTBP11277 2137 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 KIF21BO75037 1637 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 ABCA4P78363 2273 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 ZDBF2Q9HCK1 2354 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 DOCK1Q14185 1865 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 TANC1Q9C0D5 1861 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 A0A087WWC5 75 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 LOC285095A0A1B0GVY8 99 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 IGLC7A0M8Q6 106 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 NAP1L6A6NFF2 107 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 SFTA3P0C7M3 94 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 IGLC2P0DOY2 106 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 IGLC3P0DOY3 106 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 IFITM1P13164 125 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 SNCAP37840 140 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 ATP5EP56381 51 aaPredicted RBP0.53□□□□□ -2.32
COPS3-213ENST00000577210 SPINK7P58062 85 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 SNRPGP62308 76 aaKnown RBP0.53□□□□□ -2.32
COPS3-213ENST00000577210 UBA52P62987 128 aaKnown RBP0.53□□□□□ -2.32
COPS3-213ENST00000577210 HSD52Q0P140 79 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 SPATA8Q6RVD6 105 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 Q6ZRX8 168 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 VMO1Q7Z5L0 202 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 FAM213BQ8TBF2 198 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 C10orf95Q9H7T3 257 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 NDUFA4L2Q9NRX3 87 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 UQCR10Q9UDW1 63 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 IER3IP1Q9Y5U9 82 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 R4GMQ9 66 aa0.53□□□□□ -2.32
COPS3-213ENST00000577210 MYH9P35579 1960 aaKnown RBP0.53□□□□□ -2.32
COPS3-213ENST00000577210 ATP10BO94823 1461 aa0.53□□□□□ -2.33
COPS3-213ENST00000577210 ATP7BP35670 1465 aa0.53□□□□□ -2.33
COPS3-213ENST00000577210 IQSEC2Q5JU85 1478 aa0.53□□□□□ -2.33
COPS3-213ENST00000577210 C1orf167Q5SNV9 1468 aa0.53□□□□□ -2.33
COPS3-213ENST00000577210 ABCC10Q5T3U5 1492 aa0.53□□□□□ -2.33
COPS3-213ENST00000577210 HMGXB3Q12766 1538 aa0.53□□□□□ -2.33
COPS3-213ENST00000577210 EFCAB6Q5THR3 1501 aa0.53□□□□□ -2.33
COPS3-213ENST00000577210 CLASP1Q7Z460 1538 aa0.53□□□□□ -2.33
COPS3-213ENST00000577210 KIAA0586Q9BVV6 1533 aa0.53□□□□□ -2.33
COPS3-213ENST00000577210 CDC42BPGQ6DT37 1551 aa0.53□□□□□ -2.33
COPS3-213ENST00000577210 LAMC3Q9Y6N6 1575 aa0.53□□□□□ -2.33
COPS3-213ENST00000577210 RIMS1Q86UR5 1692 aaKnown RBP0.53□□□□□ -2.33
COPS3-213ENST00000577210 PATJQ8NI35 1801 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 TRBV7-3A0A075B6L6 115 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 FXYD6-FXYD2A0A087WZ82 144 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 KANTRA0A1W2PQU2 76 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 M0R135 149 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 GNGT2O14610 69 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 SSSCA1O60232 199 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 SPINK8P0C7L1 97 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 S100A10P60903 97 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 Q0VG73 95 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 WFDC2Q14508 124 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 BVES-AS1Q5T3Y7 98 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 TOMM5Q8N4H5 51 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 C18orf32Q8TCD1 76 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 SMIM4Q8WVI0 70 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 MGST2Q99735 147 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 DPY30Q9C005 99 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 CYP4F30PQ9H0H9 118 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 FXYD6Q9H0Q3 95 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 ABRACLQ9P1F3 81 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 RALGAPBQ86X10 1494 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 TOP2AP11388 1531 aaKnown RBP0.52□□□□□ -2.33
COPS3-213ENST00000577210 ARHGAP5Q13017 1502 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 DUOX2Q9NRD8 1548 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 DNMBPQ6XZF7 1577 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 RB1CC1Q8TDY2 1594 aa0.52□□□□□ -2.33
COPS3-213ENST00000577210 KDM5AP29375 1690 aaKnown RBP0.52□□□□□ -2.33
COPS3-213ENST00000577210 UMAD1C9J7I0 102 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 G3V318 75 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 K7EP34 96 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 PIN1P1O15428 100 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 ABCC6O95255 1503 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 SFT2D2O95562 160 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 MT-ATP8P03928 68 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 LINC00032P0C843 101 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 AGLP35573 1532 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 CUX1P39880 1505 aa0.51□□□□□ -2.33
COPS3-213ENST00000577210 SNRPFP62306 86 aaKnown RBP0.51□□□□□ -2.33
COPS3-213ENST00000577210 SEC11AP67812 179 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms