RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 MRPL52Q86TS9 123 aaKnown RBP9.91□□□□□ -0.82
TRAPPC1-207ENST00000575639 KRTAP4-5Q9BYR2 181 aa9.91□□□□□ -0.82
TRAPPC1-207ENST00000575639 PKHD1P08F94 4074 aa9.91□□□□□ -0.82
TRAPPC1-207ENST00000575639 IGLV5-52A0A0A0MRZ9 124 aa9.9□□□□□ -0.82
TRAPPC1-207ENST00000575639 HLA-DQA1P01909 254 aa9.9□□□□□ -0.82
TRAPPC1-207ENST00000575639 MAP1LC3AQ9H492 121 aa9.9□□□□□ -0.82
TRAPPC1-207ENST00000575639 IGLV10-54A0A075B6I4 117 aa9.89□□□□□ -0.83
TRAPPC1-207ENST00000575639 IGKV3OR2-268A0A0C4DH90 116 aa9.89□□□□□ -0.83
TRAPPC1-207ENST00000575639 GNB1LQ9BYB4 327 aa9.89□□□□□ -0.83
TRAPPC1-207ENST00000575639 PRSS47A8MTI9 375 aa9.88□□□□□ -0.83
TRAPPC1-207ENST00000575639 WFDC2Q14508 124 aa9.88□□□□□ -0.83
TRAPPC1-207ENST00000575639 ZNF664Q8N3J9 261 aa9.88□□□□□ -0.83
TRAPPC1-207ENST00000575639 CSDC2Q9Y534 153 aaKnown RBP9.88□□□□□ -0.83
TRAPPC1-207ENST00000575639 LOC389332A0A1B0GUA5 103 aa9.87□□□□□ -0.83
TRAPPC1-207ENST00000575639 GCSHP23434 173 aa9.87□□□□□ -0.83
TRAPPC1-207ENST00000575639 FUSP35637 526 aaKnown RBP eCLIP9.87□□□□□ -0.83
TRAPPC1-207ENST00000575639 CDC42SE2Q9NRR3 84 aa9.87□□□□□ -0.83
TRAPPC1-207ENST00000575639 USP17L23D6RBM5 183 aa9.86□□□□□ -0.83
TRAPPC1-207ENST00000575639 MT-ND6P03923 174 aa9.86□□□□□ -0.83
TRAPPC1-207ENST00000575639 KRTAP26-1Q6PEX3 210 aa9.86□□□□□ -0.83
TRAPPC1-207ENST00000575639 TIMM21Q9BVV7 248 aa9.86□□□□□ -0.83
TRAPPC1-207ENST00000575639 UBE2D4Q9Y2X8 147 aa9.86□□□□□ -0.83
TRAPPC1-207ENST00000575639 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC1-207ENST00000575639 Q8N8P6 123 aa9.85□□□□□ -0.83
TRAPPC1-207ENST00000575639 NXT2Q9NPJ8 142 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-207ENST00000575639 DYNC1H1Q14204 4646 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-207ENST00000575639 GAGE12HA6NDE8 117 aa9.84□□□□□ -0.83
TRAPPC1-207ENST00000575639 K7EMI3 77 aa9.84□□□□□ -0.83
TRAPPC1-207ENST00000575639 CDK2AP2O75956 126 aa9.84□□□□□ -0.83
TRAPPC1-207ENST00000575639 SS18Q15532 418 aa9.84□□□□□ -0.83
TRAPPC1-207ENST00000575639 KIAA1644Q3SXP7 199 aa9.84□□□□□ -0.83
TRAPPC1-207ENST00000575639 CFAP161Q6P656 301 aa9.84□□□□□ -0.83
TRAPPC1-207ENST00000575639 CHCHD10Q8WYQ3 142 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC1-207ENST00000575639 SPANXA1Q9NS26 97 aa9.84□□□□□ -0.83
TRAPPC1-207ENST00000575639 LINC00959A0A1B0GUT2 108 aa9.83□□□□□ -0.84
TRAPPC1-207ENST00000575639 FABP9Q0Z7S8 132 aa9.83□□□□□ -0.84
TRAPPC1-207ENST00000575639 ORMDL2Q53FV1 153 aa9.83□□□□□ -0.84
TRAPPC1-207ENST00000575639 CCL25O15444 150 aa9.82□□□□□ -0.84
TRAPPC1-207ENST00000575639 G0S2P27469 103 aa9.82□□□□□ -0.84
TRAPPC1-207ENST00000575639 RPL39P62891 51 aaKnown RBP9.82□□□□□ -0.84
TRAPPC1-207ENST00000575639 SLC7A5P1Q8MH63 180 aa9.82□□□□□ -0.84
TRAPPC1-207ENST00000575639 MRPL18Q9H0U6 180 aaKnown RBP9.82□□□□□ -0.84
TRAPPC1-207ENST00000575639 HERC1Q15751 4861 aa9.81□□□□□ -0.84
TRAPPC1-207ENST00000575639 TGIF2-C20orf24A0A0A6YYL0 155 aa9.81□□□□□ -0.84
TRAPPC1-207ENST00000575639 C1orf196B1AJZ1 125 aa9.81□□□□□ -0.84
TRAPPC1-207ENST00000575639 XCL1P47992 114 aa9.81□□□□□ -0.84
TRAPPC1-207ENST00000575639 KRTAP10-1P60331 282 aa9.81□□□□□ -0.84
TRAPPC1-207ENST00000575639 PRSS1P07477 247 aa9.8□□□□□ -0.84
TRAPPC1-207ENST00000575639 IFI27P40305 119 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC1-207ENST00000575639 MRPS36P82909 103 aaKnown RBP9.8□□□□□ -0.84
TRAPPC1-207ENST00000575639 Q6ZUT4 128 aa9.8□□□□□ -0.84
TRAPPC1-207ENST00000575639 PRSS3P2Q8NHM4 247 aa9.8□□□□□ -0.84
TRAPPC1-207ENST00000575639 ALKBH7Q9BT30 221 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC1-207ENST00000575639 CYSLTR1Q9Y271 337 aa9.8□□□□□ -0.84
TRAPPC1-207ENST00000575639 TRAPPC1Q9Y5R8 145 aa9.8□□□□□ -0.84
TRAPPC1-207ENST00000575639 LRP1BQ9NZR2 4599 aa9.8□□□□□ -0.84
TRAPPC1-207ENST00000575639 TRAV13-1A0A0B4J241 112 aa9.79□□□□□ -0.84
TRAPPC1-207ENST00000575639 hDV102S1A0JD36 115 aa9.79□□□□□ -0.84
TRAPPC1-207ENST00000575639 RNASE13Q5GAN3 156 aaKnown RBP9.79□□□□□ -0.84
TRAPPC1-207ENST00000575639 CD164L2Q6UWJ8 174 aa9.79□□□□□ -0.84
TRAPPC1-207ENST00000575639 AP5S1Q9NUS5 200 aa9.79□□□□□ -0.84
TRAPPC1-207ENST00000575639 PYGO1Q9Y3Y4 419 aa9.79□□□□□ -0.84
TRAPPC1-207ENST00000575639 FOXI1Q12951 378 aa9.78□□□□□ -0.84
TRAPPC1-207ENST00000575639 C2orf66Q6UXQ4 117 aa9.78□□□□□ -0.84
TRAPPC1-207ENST00000575639 SMCO4Q9NRQ5 59 aa9.78□□□□□ -0.84
TRAPPC1-207ENST00000575639 DNAH5Q8TE73 4624 aa9.77□□□□□ -0.84
TRAPPC1-207ENST00000575639 Q6ZN92 141 aa9.76□□□□□ -0.85
TRAPPC1-207ENST00000575639 OPRPNQ99935 248 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC1-207ENST00000575639 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC1-207ENST00000575639 IFITM10A6NMD0 228 aa9.75□□□□□ -0.85
TRAPPC1-207ENST00000575639 NPSP0C0P6 89 aa9.75□□□□□ -0.85
TRAPPC1-207ENST00000575639 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
TRAPPC1-207ENST00000575639 TMEM141Q96I45 108 aa9.75□□□□□ -0.85
TRAPPC1-207ENST00000575639 IGHV1-58A0A0C4DH39 117 aa9.74□□□□□ -0.85
TRAPPC1-207ENST00000575639 LINC01549A6NIU2 74 aa9.74□□□□□ -0.85
TRAPPC1-207ENST00000575639 COX7A2LO14548 114 aa9.74□□□□□ -0.85
TRAPPC1-207ENST00000575639 MALP21145 153 aa9.74□□□□□ -0.85
TRAPPC1-207ENST00000575639 CNBPP62633 177 aaKnown RBP9.74□□□□□ -0.85
TRAPPC1-207ENST00000575639 PAPPA-AS1Q5QFB9 102 aa9.74□□□□□ -0.85
TRAPPC1-207ENST00000575639 C15orf56Q8N910 161 aa9.74□□□□□ -0.85
TRAPPC1-207ENST00000575639 VCX2Q9H322 139 aa9.74□□□□□ -0.85
TRAPPC1-207ENST00000575639 IGLV4-3A0A075B6K6 122 aa9.73□□□□□ -0.85
TRAPPC1-207ENST00000575639 LINC01620Q4KN68 170 aa9.73□□□□□ -0.85
TRAPPC1-207ENST00000575639 TEX43Q6ZNM6 134 aa9.73□□□□□ -0.85
TRAPPC1-207ENST00000575639 FAM104AQ969W3 186 aa9.73□□□□□ -0.85
TRAPPC1-207ENST00000575639 YPEL4Q96NS1 127 aa9.73□□□□□ -0.85
TRAPPC1-207ENST00000575639 C2orf88Q9BSF0 95 aa9.73□□□□□ -0.85
TRAPPC1-207ENST00000575639 GVQW2A0A096LPI5 108 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-207ENST00000575639 LINC01546A6NGU7 62 aa9.72□□□□□ -0.85
TRAPPC1-207ENST00000575639 XGP55808 180 aa9.72□□□□□ -0.85
TRAPPC1-207ENST00000575639 HIGD2BQ4VC39 106 aa9.72□□□□□ -0.85
TRAPPC1-207ENST00000575639 CBLN2Q8IUK8 224 aa9.72□□□□□ -0.85
TRAPPC1-207ENST00000575639 C9orf163Q8N9P6 203 aa9.72□□□□□ -0.85
TRAPPC1-207ENST00000575639 TOMM6Q96B49 74 aa9.72□□□□□ -0.85
TRAPPC1-207ENST00000575639 IGIPA6NJ69 53 aa9.71□□□□□ -0.86
TRAPPC1-207ENST00000575639 ZNF561-AS1K7EIQ3 104 aa9.71□□□□□ -0.86
TRAPPC1-207ENST00000575639 APOMO95445 188 aa9.71□□□□□ -0.86
TRAPPC1-207ENST00000575639 TIMM17AQ99595 171 aa9.71□□□□□ -0.86
TRAPPC1-207ENST00000575639 RAB5BP61020 215 aa9.7□□□□□ -0.86
TRAPPC1-207ENST00000575639 ERASQ7Z444 233 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms