RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 C2orf48Q96LS8 159 aa5.46□□□□□ -1.54
SMG6-218ENST00000575454 CAMK2N2Q96S95 79 aa5.46□□□□□ -1.54
SMG6-218ENST00000575454 CYTL1Q9NRR1 136 aa5.46□□□□□ -1.54
SMG6-218ENST00000575454 A0A087WZ39 114 aa5.45□□□□□ -1.54
SMG6-218ENST00000575454 SDHAF1A6NFY7 115 aa5.45□□□□□ -1.54
SMG6-218ENST00000575454 C1orf196B1AJZ1 125 aa5.45□□□□□ -1.54
SMG6-218ENST00000575454 COX7A2LO14548 114 aa5.45□□□□□ -1.54
SMG6-218ENST00000575454 H2AFB1P0C5Y9 115 aa5.45□□□□□ -1.54
SMG6-218ENST00000575454 CTRLP40313 264 aa5.45□□□□□ -1.54
SMG6-218ENST00000575454 RNF151Q2KHN1 245 aa5.45□□□□□ -1.54
SMG6-218ENST00000575454 NUP35Q8NFH5 326 aa5.45□□□□□ -1.54
SMG6-218ENST00000575454 MRAP2Q96G30 205 aa5.45□□□□□ -1.54
SMG6-218ENST00000575454 CNFNQ9BYD5 112 aa5.45□□□□□ -1.54
SMG6-218ENST00000575454 MANBALQ9NQG1 85 aa5.45□□□□□ -1.54
SMG6-218ENST00000575454 CDC42SE2Q9NRR3 84 aa5.45□□□□□ -1.54
SMG6-218ENST00000575454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.44□□□□□ -1.54
SMG6-218ENST00000575454 ARPC5O15511 151 aa5.44□□□□□ -1.54
SMG6-218ENST00000575454 BCL2P10415 239 aa5.44□□□□□ -1.54
SMG6-218ENST00000575454 CCL20P78556 96 aa5.44□□□□□ -1.54
SMG6-218ENST00000575454 MEF2BQ02080 365 aaPredicted RBP5.44□□□□□ -1.54
SMG6-218ENST00000575454 RPL18AQ02543 176 aaKnown RBP5.44□□□□□ -1.54
SMG6-218ENST00000575454 SMAGPQ0VAQ4 97 aa5.44□□□□□ -1.54
SMG6-218ENST00000575454 PHF5AQ7RTV0 110 aaKnown RBP5.44□□□□□ -1.54
SMG6-218ENST00000575454 MRPL52Q86TS9 123 aaKnown RBP5.44□□□□□ -1.54
SMG6-218ENST00000575454 TRBV6-5A0A0K0K1A5 114 aa5.43□□□□□ -1.54
SMG6-218ENST00000575454 PDE6DO43924 150 aa5.43□□□□□ -1.54
SMG6-218ENST00000575454 ESDP10768 282 aa5.43□□□□□ -1.54
SMG6-218ENST00000575454 RPL39LQ96EH5 51 aaKnown RBP5.43□□□□□ -1.54
SMG6-218ENST00000575454 GNG13Q9P2W3 67 aa5.43□□□□□ -1.54
SMG6-218ENST00000575454 CARHSP1Q9Y2V2 147 aaKnown RBP5.43□□□□□ -1.54
SMG6-218ENST00000575454 F8WDY8 70 aa5.42□□□□□ -1.54
SMG6-218ENST00000575454 TEX46H3BTG2 121 aa5.42□□□□□ -1.54
SMG6-218ENST00000575454 BCL2L11O43521 198 aa5.42□□□□□ -1.54
SMG6-218ENST00000575454 IMMP2LQ96T52 175 aa5.42□□□□□ -1.54
SMG6-218ENST00000575454 RAB19A4D1S5 217 aa5.41□□□□□ -1.54
SMG6-218ENST00000575454 G3V3Q6 166 aa5.41□□□□□ -1.54
SMG6-218ENST00000575454 LCE2AQ5TA79 106 aaPredicted RBP5.41□□□□□ -1.54
SMG6-218ENST00000575454 NUDT10Q8NFP7 164 aa5.41□□□□□ -1.54
SMG6-218ENST00000575454 NUDT11Q96G61 164 aa5.41□□□□□ -1.54
SMG6-218ENST00000575454 RPP21Q9H633 154 aaKnown RBP5.41□□□□□ -1.54
SMG6-218ENST00000575454 ST20Q9HBF5 79 aa5.41□□□□□ -1.54
SMG6-218ENST00000575454 C7orf77A4D0Y5 90 aa5.4□□□□□ -1.54
SMG6-218ENST00000575454 TSHBP01222 138 aa5.4□□□□□ -1.54
SMG6-218ENST00000575454 KRTAP1-4P0C5Y4 121 aa5.4□□□□□ -1.54
SMG6-218ENST00000575454 ZNF345Q14585 488 aa5.4□□□□□ -1.54
SMG6-218ENST00000575454 TMEM241Q24JQ0 296 aa5.4□□□□□ -1.54
SMG6-218ENST00000575454 OR10D4PQ8NGN7 298 aa5.4□□□□□ -1.54
SMG6-218ENST00000575454 OPRPNQ99935 248 aaPredicted RBP5.4□□□□□ -1.54
SMG6-218ENST00000575454 MED9Q9NWA0 146 aa5.4□□□□□ -1.54
SMG6-218ENST00000575454 MRPL35Q9NZE8 188 aaKnown RBP5.4□□□□□ -1.54
SMG6-218ENST00000575454 CSDC2Q9Y534 153 aaKnown RBP5.4□□□□□ -1.54
SMG6-218ENST00000575454 SPAG11BQ08648 103 aa5.39□□□□□ -1.55
SMG6-218ENST00000575454 TMEM242Q9NWH2 141 aa5.39□□□□□ -1.55
SMG6-218ENST00000575454 TRBV20OR9-2A0A075B6H5 130 aa5.38□□□□□ -1.55
SMG6-218ENST00000575454 TRAV13-1A0A0B4J241 112 aa5.38□□□□□ -1.55
SMG6-218ENST00000575454 TRBV27A0A0K0K1C4 114 aa5.38□□□□□ -1.55
SMG6-218ENST00000575454 KANTRA0A1W2PQU2 76 aa5.38□□□□□ -1.55
SMG6-218ENST00000575454 VCYO14598 125 aa5.38□□□□□ -1.55
SMG6-218ENST00000575454 FCER1GP30273 86 aa5.38□□□□□ -1.55
SMG6-218ENST00000575454 FOXA3P55318 350 aaPredicted RBP5.38□□□□□ -1.55
SMG6-218ENST00000575454 UBE2BP63146 152 aa5.38□□□□□ -1.55
SMG6-218ENST00000575454 C5orf38Q86SI9 138 aa5.38□□□□□ -1.55
SMG6-218ENST00000575454 BORCS7Q96B45 105 aa5.38□□□□□ -1.55
SMG6-218ENST00000575454 NDUFA1O15239 70 aa5.37□□□□□ -1.55
SMG6-218ENST00000575454 PPP1R17O96001 155 aa5.37□□□□□ -1.55
SMG6-218ENST00000575454 TLX1NBP0CAT3 122 aa5.37□□□□□ -1.55
SMG6-218ENST00000575454 POLR2KP53803 58 aaKnown RBP5.37□□□□□ -1.55
SMG6-218ENST00000575454 FAM19A5Q7Z5A7 132 aaPredicted RBP5.37□□□□□ -1.55
SMG6-218ENST00000575454 TMEM18Q96B42 140 aa5.37□□□□□ -1.55
SMG6-218ENST00000575454 RNASE7Q9H1E1 156 aaKnown RBP5.37□□□□□ -1.55
SMG6-218ENST00000575454 FAM168BA1KXE4 195 aa5.36□□□□□ -1.55
SMG6-218ENST00000575454 HMSDA8MTL9 139 aa5.36□□□□□ -1.55
SMG6-218ENST00000575454 A8MWL6 223 aa5.36□□□□□ -1.55
SMG6-218ENST00000575454 TAGLN2P37802 199 aaKnown RBP5.36□□□□□ -1.55
SMG6-218ENST00000575454 KIR2DL4Q99706 377 aa5.36□□□□□ -1.55
SMG6-218ENST00000575454 M0QXV9 152 aa5.35□□□□□ -1.55
SMG6-218ENST00000575454 ZNF861PO60384 105 aa5.35□□□□□ -1.55
SMG6-218ENST00000575454 TSPAN13O95857 204 aa5.35□□□□□ -1.55
SMG6-218ENST00000575454 GAGE2EQ4V326 116 aa5.35□□□□□ -1.55
SMG6-218ENST00000575454 KRTAP11-1Q8IUC1 163 aa5.35□□□□□ -1.55
SMG6-218ENST00000575454 ORAOV1Q8WV07 137 aa5.35□□□□□ -1.55
SMG6-218ENST00000575454 TIMM21Q9BVV7 248 aa5.35□□□□□ -1.55
SMG6-218ENST00000575454 TMEM191AQ9H0A3 160 aa5.35□□□□□ -1.55
SMG6-218ENST00000575454 GAGE2DQ9UEU5 116 aa5.35□□□□□ -1.55
SMG6-218ENST00000575454 UBE2D4Q9Y2X8 147 aa5.35□□□□□ -1.55
SMG6-218ENST00000575454 GATCO43716 136 aaKnown RBP5.34□□□□□ -1.55
SMG6-218ENST00000575454 CT83Q5H943 113 aa5.34□□□□□ -1.55
SMG6-218ENST00000575454 OCC1Q8TAD7 63 aa5.34□□□□□ -1.55
SMG6-218ENST00000575454 SMDT1Q9H4I9 107 aa5.34□□□□□ -1.55
SMG6-218ENST00000575454 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
SMG6-218ENST00000575454 SMLR1H3BR10 107 aa5.33□□□□□ -1.56
SMG6-218ENST00000575454 K7EN84 100 aa5.33□□□□□ -1.56
SMG6-218ENST00000575454 PPP1R2P9O14990 202 aa5.33□□□□□ -1.56
SMG6-218ENST00000575454 TCAPO15273 167 aa5.33□□□□□ -1.56
SMG6-218ENST00000575454 RNASE13Q5GAN3 156 aaKnown RBP5.33□□□□□ -1.56
SMG6-218ENST00000575454 FAM231DQ6ZW35 169 aa5.33□□□□□ -1.56
SMG6-218ENST00000575454 IGHV3OR16-9A0A0B4J2B5 98 aa5.32□□□□□ -1.56
SMG6-218ENST00000575454 TRBV30A0A0K0K1B3 111 aa5.32□□□□□ -1.56
SMG6-218ENST00000575454 A0A1B0GUT8 65 aa5.32□□□□□ -1.56
SMG6-218ENST00000575454 NDUFC2-KCTD14E9PQ53 114 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms