RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 NTN5Q8WTR8 489 aaPredicted RBP10.07□□□□□ -0.8
LITAF-217ENST00000575426 C14orf177Q52M58 125 aa10.06□□□□□ -0.8
LITAF-217ENST00000575426 ZNF664Q8N3J9 261 aa10.06□□□□□ -0.8
LITAF-217ENST00000575426 Q8N8P6 123 aa10.06□□□□□ -0.8
LITAF-217ENST00000575426 IGLV5-52A0A0A0MRZ9 124 aa10.05□□□□□ -0.8
LITAF-217ENST00000575426 FABP9Q0Z7S8 132 aa10.05□□□□□ -0.8
LITAF-217ENST00000575426 TIMM21Q9BVV7 248 aa10.05□□□□□ -0.8
LITAF-217ENST00000575426 MRPL18Q9H0U6 180 aaKnown RBP10.05□□□□□ -0.8
LITAF-217ENST00000575426 CDC42SE2Q9NRR3 84 aa10.05□□□□□ -0.8
LITAF-217ENST00000575426 UBE2D4Q9Y2X8 147 aa10.05□□□□□ -0.8
LITAF-217ENST00000575426 CSDC2Q9Y534 153 aaKnown RBP10.05□□□□□ -0.8
LITAF-217ENST00000575426 HECTD4Q9Y4D8 3996 aa10.05□□□□□ -0.8
LITAF-217ENST00000575426 TGIF2-C20orf24A0A0A6YYL0 155 aa10.04□□□□□ -0.8
LITAF-217ENST00000575426 FUSP35637 526 aaKnown RBP eCLIP10.04□□□□□ -0.8
LITAF-217ENST00000575426 WFDC2Q14508 124 aa10.04□□□□□ -0.8
LITAF-217ENST00000575426 SS18Q15532 418 aa10.04□□□□□ -0.8
LITAF-217ENST00000575426 NXT2Q9NPJ8 142 aaKnown RBP10.04□□□□□ -0.8
LITAF-217ENST00000575426 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.03□□□□□ -0.8
LITAF-217ENST00000575426 K7EMI3 77 aa10.03□□□□□ -0.8
LITAF-217ENST00000575426 RPL39P62891 51 aaKnown RBP10.03□□□□□ -0.8
LITAF-217ENST00000575426 ORMDL2Q53FV1 153 aa10.03□□□□□ -0.8
LITAF-217ENST00000575426 TRAPPC1Q9Y5R8 145 aa10.03□□□□□ -0.8
LITAF-217ENST00000575426 LINC00959A0A1B0GUT2 108 aa10.02□□□□□ -0.81
LITAF-217ENST00000575426 GAGE12HA6NDE8 117 aa10.02□□□□□ -0.81
LITAF-217ENST00000575426 USP17L23D6RBM5 183 aa10.02□□□□□ -0.81
LITAF-217ENST00000575426 GCSHP23434 173 aa10.02□□□□□ -0.81
LITAF-217ENST00000575426 KRTAP26-1Q6PEX3 210 aa10.02□□□□□ -0.81
LITAF-217ENST00000575426 PRSS3P2Q8NHM4 247 aa10.02□□□□□ -0.81
LITAF-217ENST00000575426 SPANXA1Q9NS26 97 aa10.02□□□□□ -0.81
LITAF-217ENST00000575426 G0S2P27469 103 aa10.01□□□□□ -0.81
LITAF-217ENST00000575426 IFI27P40305 119 aaPredicted RBP10.01□□□□□ -0.81
LITAF-217ENST00000575426 CHCHD10Q8WYQ3 142 aaPredicted RBP10.01□□□□□ -0.81
LITAF-217ENST00000575426 ALKBH7Q9BT30 221 aaPredicted RBP10.01□□□□□ -0.81
LITAF-217ENST00000575426 SMCO4Q9NRQ5 59 aa10.01□□□□□ -0.81
LITAF-217ENST00000575426 CCL25O15444 150 aa10□□□□□ -0.81
LITAF-217ENST00000575426 CFAP161Q6P656 301 aa10□□□□□ -0.81
LITAF-217ENST00000575426 C1orf196B1AJZ1 125 aa9.99□□□□□ -0.81
LITAF-217ENST00000575426 XCL1P47992 114 aa9.99□□□□□ -0.81
LITAF-217ENST00000575426 RNASE13Q5GAN3 156 aaKnown RBP9.99□□□□□ -0.81
LITAF-217ENST00000575426 CYSLTR1Q9Y271 337 aa9.99□□□□□ -0.81
LITAF-217ENST00000575426 BIRC6Q9NR09 4857 aa9.99□□□□□ -0.81
LITAF-217ENST00000575426 MRPS36P82909 103 aaKnown RBP9.98□□□□□ -0.81
LITAF-217ENST00000575426 Q6ZUT4 128 aa9.98□□□□□ -0.81
LITAF-217ENST00000575426 PYGO1Q9Y3Y4 419 aa9.98□□□□□ -0.81
LITAF-217ENST00000575426 TRAV13-1A0A0B4J241 112 aa9.97□□□□□ -0.81
LITAF-217ENST00000575426 C2orf66Q6UXQ4 117 aa9.97□□□□□ -0.81
LITAF-217ENST00000575426 FA2HQ7L5A8 372 aa9.97□□□□□ -0.81
LITAF-217ENST00000575426 AP5S1Q9NUS5 200 aa9.97□□□□□ -0.81
LITAF-217ENST00000575426 hDV102S1A0JD36 115 aa9.96□□□□□ -0.82
LITAF-217ENST00000575426 PRSS1P07477 247 aa9.96□□□□□ -0.82
LITAF-217ENST00000575426 CD164L2Q6UWJ8 174 aa9.96□□□□□ -0.82
LITAF-217ENST00000575426 CBLN2Q8IUK8 224 aa9.96□□□□□ -0.82
LITAF-217ENST00000575426 OPRPNQ99935 248 aaPredicted RBP9.96□□□□□ -0.82
LITAF-217ENST00000575426 PKHD1P08F94 4074 aa9.96□□□□□ -0.82
LITAF-217ENST00000575426 CDK2AP2O75956 126 aa9.95□□□□□ -0.82
LITAF-217ENST00000575426 KRTAP10-1P60331 282 aa9.95□□□□□ -0.82
LITAF-217ENST00000575426 FOXI1Q12951 378 aa9.95□□□□□ -0.82
LITAF-217ENST00000575426 Q6ZN92 141 aa9.95□□□□□ -0.82
LITAF-217ENST00000575426 DNAH11Q96DT5 4516 aa9.95□□□□□ -0.82
LITAF-217ENST00000575426 IFITM10A6NMD0 228 aa9.94□□□□□ -0.82
LITAF-217ENST00000575426 TMEM141Q96I45 108 aa9.94□□□□□ -0.82
LITAF-217ENST00000575426 YPEL4Q96NS1 127 aa9.94□□□□□ -0.82
LITAF-217ENST00000575426 IGLV4-3A0A075B6K6 122 aa9.93□□□□□ -0.82
LITAF-217ENST00000575426 LINC01549A6NIU2 74 aa9.93□□□□□ -0.82
LITAF-217ENST00000575426 PAPPA-AS1Q5QFB9 102 aa9.93□□□□□ -0.82
LITAF-217ENST00000575426 TEX43Q6ZNM6 134 aa9.93□□□□□ -0.82
LITAF-217ENST00000575426 C2orf88Q9BSF0 95 aa9.93□□□□□ -0.82
LITAF-217ENST00000575426 VCX2Q9H322 139 aa9.93□□□□□ -0.82
LITAF-217ENST00000575426 IGHV1-58A0A0C4DH39 117 aa9.92□□□□□ -0.82
LITAF-217ENST00000575426 NPSP0C0P6 89 aa9.92□□□□□ -0.82
LITAF-217ENST00000575426 MALP21145 153 aa9.92□□□□□ -0.82
LITAF-217ENST00000575426 TOMM6Q96B49 74 aa9.92□□□□□ -0.82
LITAF-217ENST00000575426 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.91□□□□□ -0.82
LITAF-217ENST00000575426 LINC01546A6NGU7 62 aa9.91□□□□□ -0.82
LITAF-217ENST00000575426 COX7A2LO14548 114 aa9.91□□□□□ -0.82
LITAF-217ENST00000575426 RAB5BP61020 215 aa9.91□□□□□ -0.82
LITAF-217ENST00000575426 HIGD2BQ4VC39 106 aa9.91□□□□□ -0.82
LITAF-217ENST00000575426 C15orf56Q8N910 161 aa9.91□□□□□ -0.82
LITAF-217ENST00000575426 C18orf32Q8TCD1 76 aa9.91□□□□□ -0.82
LITAF-217ENST00000575426 FAM104AQ969W3 186 aa9.91□□□□□ -0.82
LITAF-217ENST00000575426 SCGB3A1Q96QR1 104 aa9.91□□□□□ -0.82
LITAF-217ENST00000575426 IGIPA6NJ69 53 aa9.9□□□□□ -0.82
LITAF-217ENST00000575426 APOMO95445 188 aa9.9□□□□□ -0.82
LITAF-217ENST00000575426 LINC00614P0C842 121 aa9.9□□□□□ -0.82
LITAF-217ENST00000575426 TIMM17AQ99595 171 aa9.9□□□□□ -0.82
LITAF-217ENST00000575426 LINC01620Q4KN68 170 aa9.89□□□□□ -0.83
LITAF-217ENST00000575426 ERASQ7Z444 233 aa9.89□□□□□ -0.83
LITAF-217ENST00000575426 ZNF561-AS1K7EIQ3 104 aa9.88□□□□□ -0.83
LITAF-217ENST00000575426 CNBPP62633 177 aaKnown RBP9.88□□□□□ -0.83
LITAF-217ENST00000575426 C5orf38Q86SI9 138 aa9.88□□□□□ -0.83
LITAF-217ENST00000575426 C9orf163Q8N9P6 203 aa9.88□□□□□ -0.83
LITAF-217ENST00000575426 DYNC1H1Q14204 4646 aaKnown RBP9.87□□□□□ -0.83
LITAF-217ENST00000575426 GVQW2A0A096LPI5 108 aaPredicted RBP9.87□□□□□ -0.83
LITAF-217ENST00000575426 AMELXQ99217 191 aa9.87□□□□□ -0.83
LITAF-217ENST00000575426 IGHV3-64A0A075B6Q5 118 aa9.85□□□□□ -0.83
LITAF-217ENST00000575426 IGHV3OR16-9A0A0B4J2B5 98 aa9.85□□□□□ -0.83
LITAF-217ENST00000575426 TRGC2P03986 189 aa9.85□□□□□ -0.83
LITAF-217ENST00000575426 UBE2D1P51668 147 aa9.85□□□□□ -0.83
LITAF-217ENST00000575426 SEC11AP67812 179 aa9.85□□□□□ -0.83
LITAF-217ENST00000575426 LINC00242Q5T6M2 205 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms