RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 LINC00612Q8N6U2 182 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 ZNRF2Q8NHG8 242 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 PRELID3AQ96N28 172 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 MRPL20Q9BYC9 149 aaKnown RBP3.67□□□□□ -1.82
SF3B3-214ENST00000572365 TP53TG1Q9Y2A0 90 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 CSDC2Q9Y534 153 aaKnown RBP3.67□□□□□ -1.82
SF3B3-214ENST00000572365 IGLV8-61A0A075B6I0 122 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 TRAV5A0A0B4J249 113 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 IGKV1-9A0A0C4DH69 117 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 LOC100131303A0A0U1RQF7 123 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 FAM168BA1KXE4 195 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 F2Z2F3 143 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 H3BP45 60 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 ATP5LO75964 103 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 ORM1P02763 201 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 ACYP1P07311 99 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 ARL14EPLP0DKL9 152 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 P0DMU3 169 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 FAM231AP0DMU4 169 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 FAM231CP0DMU5 169 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 PRB4P10163 310 aaPredicted RBP3.66□□□□□ -1.82
SF3B3-214ENST00000572365 IAPPP10997 89 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 EMP1P54849 157 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 RBM11P57052 281 aaKnown RBP3.66□□□□□ -1.82
SF3B3-214ENST00000572365 RRN3P1Q2M238 152 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 SPATA31B1PQ5VZV4 182 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 AMTNQ6UX39 209 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 SLC25A48Q6ZT89 311 aaKnown RBP3.66□□□□□ -1.82
SF3B3-214ENST00000572365 LYPD1Q8N2G4 141 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 KIR2DL4Q99706 377 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 ENY2Q9NPA8 101 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 ZNF492Q9P255 531 aa3.66□□□□□ -1.82
SF3B3-214ENST00000572365 TRBV20OR9-2A0A075B6H5 130 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 IGKV1D-8A0A087WSZ0 117 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 DEFB131BA0A096LNP1 70 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 FAM240AA0A1B0GVK7 77 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 A0A1B0GXF2 115 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 LINC01549A6NIU2 74 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 K7EN84 100 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 LGALS9O00182 355 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 UQCRQO14949 82 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 SCTP09683 121 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 FGF6P10767 208 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 WFDC2Q14508 124 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 FXYD3Q14802 87 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 CFAP126Q5VTH2 177 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 Q8IYB0 196 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 GATD1Q8NB37 220 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 OR1L4Q8NGR5 311 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 COPS9Q8WXC6 57 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 ZNF414Q96IQ9 312 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 CHAC1Q9BUX1 264 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 CELA1Q9UNI1 258 aa3.65□□□□□ -1.83
SF3B3-214ENST00000572365 IGKV3-7A0A075B6H7 116 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 IGHV3OR16-8A0A075B7F1 116 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 TRAV10A0A0B4J240 114 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 NCR2O95944 276 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 HBDP02042 147 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 MT-ATP8P03928 68 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 FOXA3P55318 350 aaPredicted RBP3.64□□□□□ -1.83
SF3B3-214ENST00000572365 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 C12orf74Q32Q52 190 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 PIGYQ3MUY2 71 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 LINC00311Q8N616 119 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 NPBQ8NG41 125 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 IFI27L1Q96BM0 104 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 FMC1Q96HJ9 113 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 TMEM101Q96IK0 257 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 LINC01600Q96MT4 127 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 HSD17B10Q99714 261 aaKnown RBP3.64□□□□□ -1.83
SF3B3-214ENST00000572365 PRADC1Q9BSG0 188 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 RPP21Q9H633 154 aaKnown RBP3.64□□□□□ -1.83
SF3B3-214ENST00000572365 CCL28Q9NRJ3 127 aa3.64□□□□□ -1.83
SF3B3-214ENST00000572365 NHP2Q9NX24 153 aaKnown RBP3.64□□□□□ -1.83
SF3B3-214ENST00000572365 MYMXA0A1B0GTQ4 84 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 HIGD1CA8MV81 97 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 C9JAW5 83 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 NDUFA3O95167 84 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 NPYP01303 97 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 IGLV2-23P01705 113 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 P01737 135 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 P0C879 139 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 HTN3P15516 51 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 RPL13AP40429 203 aaKnown RBP3.63□□□□□ -1.83
SF3B3-214ENST00000572365 SUB1P53999 127 aaKnown RBP eCLIP3.63□□□□□ -1.83
SF3B3-214ENST00000572365 RPL39P5Q59GN2 51 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 C15orf53Q8NAA6 179 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 IGF2BP2-AS1Q96M15 143 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 HIST1H4GQ99525 98 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 MGST2Q99735 147 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 C20orf78Q9BR46 151 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 HDHD3Q9BSH5 251 aaPredicted RBP3.63□□□□□ -1.83
SF3B3-214ENST00000572365 LINC00574Q9H8X3 128 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 PRO0461Q9UI25 63 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 HIGD1AQ9Y241 93 aa3.63□□□□□ -1.83
SF3B3-214ENST00000572365 TRAV8-4A0A0B4J246 113 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 TRBV6-1A0A0K0K1D8 114 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 A0A1B0GUT8 65 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 RS1O15537 224 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 DPM2O94777 84 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms