RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 CFAP161Q6P656 301 aa9.2□□□□□ -0.94
RPAIN-211ENST00000572174 SVBPQ8N300 66 aa9.2□□□□□ -0.94
RPAIN-211ENST00000572174 TIMM21Q9BVV7 248 aa9.2□□□□□ -0.94
RPAIN-211ENST00000572174 IGLV10-54A0A075B6I4 117 aa9.19□□□□□ -0.94
RPAIN-211ENST00000572174 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-211ENST00000572174 USP17L23D6RBM5 183 aa9.19□□□□□ -0.94
RPAIN-211ENST00000572174 MT-ND6P03923 174 aa9.19□□□□□ -0.94
RPAIN-211ENST00000572174 SS18Q15532 418 aa9.19□□□□□ -0.94
RPAIN-211ENST00000572174 RPS10P5Q9NQ39 176 aa9.19□□□□□ -0.94
RPAIN-211ENST00000572174 IGKV3OR2-268A0A0C4DH90 116 aa9.18□□□□□ -0.94
RPAIN-211ENST00000572174 PRSS47A8MTI9 375 aa9.18□□□□□ -0.94
RPAIN-211ENST00000572174 G0S2P27469 103 aa9.18□□□□□ -0.94
RPAIN-211ENST00000572174 WFDC2Q14508 124 aa9.18□□□□□ -0.94
RPAIN-211ENST00000572174 ZNF664Q8N3J9 261 aa9.18□□□□□ -0.94
RPAIN-211ENST00000572174 SPANXA1Q9NS26 97 aa9.18□□□□□ -0.94
RPAIN-211ENST00000572174 AP5S1Q9NUS5 200 aa9.18□□□□□ -0.94
RPAIN-211ENST00000572174 CHCHD10Q8WYQ3 142 aaPredicted RBP9.17□□□□□ -0.94
RPAIN-211ENST00000572174 GNB1LQ9BYB4 327 aa9.17□□□□□ -0.94
RPAIN-211ENST00000572174 NXT2Q9NPJ8 142 aaKnown RBP9.17□□□□□ -0.94
RPAIN-211ENST00000572174 CDC42SE2Q9NRR3 84 aa9.17□□□□□ -0.94
RPAIN-211ENST00000572174 UBE2D4Q9Y2X8 147 aa9.17□□□□□ -0.94
RPAIN-211ENST00000572174 DNAH11Q96DT5 4516 aa9.17□□□□□ -0.94
RPAIN-211ENST00000572174 APOC3P02656 99 aa9.16□□□□□ -0.94
RPAIN-211ENST00000572174 KRTAP26-1Q6PEX3 210 aa9.16□□□□□ -0.94
RPAIN-211ENST00000572174 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.15□□□□□ -0.94
RPAIN-211ENST00000572174 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
RPAIN-211ENST00000572174 C1orf196B1AJZ1 125 aa9.15□□□□□ -0.94
RPAIN-211ENST00000572174 IFI27P40305 119 aaPredicted RBP9.15□□□□□ -0.94
RPAIN-211ENST00000572174 ORMDL2Q53FV1 153 aa9.15□□□□□ -0.94
RPAIN-211ENST00000572174 Q8N8P6 123 aa9.15□□□□□ -0.94
RPAIN-211ENST00000572174 DYNC1H1Q14204 4646 aaKnown RBP9.14□□□□□ -0.95
RPAIN-211ENST00000572174 GAGE12HA6NDE8 117 aa9.14□□□□□ -0.95
RPAIN-211ENST00000572174 KRTAP10-1P60331 282 aa9.14□□□□□ -0.95
RPAIN-211ENST00000572174 hDV102S1A0JD36 115 aa9.13□□□□□ -0.95
RPAIN-211ENST00000572174 LINC01549A6NIU2 74 aa9.13□□□□□ -0.95
RPAIN-211ENST00000572174 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.95
RPAIN-211ENST00000572174 MRPS36P82909 103 aaKnown RBP9.13□□□□□ -0.95
RPAIN-211ENST00000572174 CD164L2Q6UWJ8 174 aa9.13□□□□□ -0.95
RPAIN-211ENST00000572174 PKIGQ9Y2B9 76 aa9.13□□□□□ -0.95
RPAIN-211ENST00000572174 LOC389332A0A1B0GUA5 103 aa9.12□□□□□ -0.95
RPAIN-211ENST00000572174 PRSS1P07477 247 aa9.12□□□□□ -0.95
RPAIN-211ENST00000572174 NPSP0C0P6 89 aa9.12□□□□□ -0.95
RPAIN-211ENST00000572174 XCL1P47992 114 aa9.12□□□□□ -0.95
RPAIN-211ENST00000572174 CYSLTR1Q9Y271 337 aa9.12□□□□□ -0.95
RPAIN-211ENST00000572174 PYGO1Q9Y3Y4 419 aa9.12□□□□□ -0.95
RPAIN-211ENST00000572174 CNBPP62633 177 aaKnown RBP9.11□□□□□ -0.95
RPAIN-211ENST00000572174 Q6ZN92 141 aa9.11□□□□□ -0.95
RPAIN-211ENST00000572174 IGHV1-58A0A0C4DH39 117 aa9.1□□□□□ -0.95
RPAIN-211ENST00000572174 RPL39P62891 51 aaKnown RBP9.1□□□□□ -0.95
RPAIN-211ENST00000572174 PAPPA-AS1Q5QFB9 102 aa9.1□□□□□ -0.95
RPAIN-211ENST00000572174 Q6ZUT4 128 aa9.1□□□□□ -0.95
RPAIN-211ENST00000572174 TRAV13-1A0A0B4J241 112 aa9.09□□□□□ -0.95
RPAIN-211ENST00000572174 APOMO95445 188 aa9.09□□□□□ -0.95
RPAIN-211ENST00000572174 MALP21145 153 aa9.09□□□□□ -0.95
RPAIN-211ENST00000572174 FOXI1Q12951 378 aa9.09□□□□□ -0.95
RPAIN-211ENST00000572174 Q8N1X5 172 aa9.09□□□□□ -0.95
RPAIN-211ENST00000572174 C9orf163Q8N9P6 203 aa9.09□□□□□ -0.95
RPAIN-211ENST00000572174 PRSS3P2Q8NHM4 247 aa9.09□□□□□ -0.95
RPAIN-211ENST00000572174 C2orf88Q9BSF0 95 aa9.09□□□□□ -0.95
RPAIN-211ENST00000572174 MRPL18Q9H0U6 180 aaKnown RBP9.09□□□□□ -0.95
RPAIN-211ENST00000572174 GVQW2A0A096LPI5 108 aaPredicted RBP9.08□□□□□ -0.96
RPAIN-211ENST00000572174 IFITM10A6NMD0 228 aa9.08□□□□□ -0.96
RPAIN-211ENST00000572174 COX7A2LO14548 114 aa9.08□□□□□ -0.96
RPAIN-211ENST00000572174 FABP9Q0Z7S8 132 aa9.08□□□□□ -0.96
RPAIN-211ENST00000572174 C2orf66Q6UXQ4 117 aa9.08□□□□□ -0.96
RPAIN-211ENST00000572174 TEX43Q6ZNM6 134 aa9.08□□□□□ -0.96
RPAIN-211ENST00000572174 Q6ZSA8 131 aa9.08□□□□□ -0.96
RPAIN-211ENST00000572174 C15orf56Q8N910 161 aa9.08□□□□□ -0.96
RPAIN-211ENST00000572174 TMEM141Q96I45 108 aa9.08□□□□□ -0.96
RPAIN-211ENST00000572174 KIAA1644Q3SXP7 199 aa9.07□□□□□ -0.96
RPAIN-211ENST00000572174 SMCO4Q9NRQ5 59 aa9.07□□□□□ -0.96
RPAIN-211ENST00000572174 TRAPPC1Q9Y5R8 145 aa9.07□□□□□ -0.96
RPAIN-211ENST00000572174 DNAH5Q8TE73 4624 aa9.06□□□□□ -0.96
RPAIN-211ENST00000572174 IGHV3-64A0A075B6Q5 118 aa9.06□□□□□ -0.96
RPAIN-211ENST00000572174 ZNF561-AS1K7EIQ3 104 aa9.06□□□□□ -0.96
RPAIN-211ENST00000572174 XGP55808 180 aa9.06□□□□□ -0.96
RPAIN-211ENST00000572174 RNASE13Q5GAN3 156 aaKnown RBP9.06□□□□□ -0.96
RPAIN-211ENST00000572174 ALKBH7Q9BT30 221 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-211ENST00000572174 KIAA1109Q2LD37 5005 aa9.06□□□□□ -0.96
RPAIN-211ENST00000572174 TGIF2-C20orf24A0A0A6YYL0 155 aa9.05□□□□□ -0.96
RPAIN-211ENST00000572174 FA2HQ7L5A8 372 aa9.05□□□□□ -0.96
RPAIN-211ENST00000572174 IGLV4-3A0A075B6K6 122 aa9.04□□□□□ -0.96
RPAIN-211ENST00000572174 EPM2AB3EWF7 344 aa9.04□□□□□ -0.96
RPAIN-211ENST00000572174 SEC11AP67812 179 aa9.04□□□□□ -0.96
RPAIN-211ENST00000572174 HIGD2BQ4VC39 106 aa9.04□□□□□ -0.96
RPAIN-211ENST00000572174 TIMM17AQ99595 171 aa9.04□□□□□ -0.96
RPAIN-211ENST00000572174 VCX2Q9H322 139 aa9.04□□□□□ -0.96
RPAIN-211ENST00000572174 LRP1BQ9NZR2 4599 aa9.04□□□□□ -0.96
RPAIN-211ENST00000572174 FAM229AH3BQW9 127 aa9.03□□□□□ -0.96
RPAIN-211ENST00000572174 OR10D4PQ8NGN7 298 aa9.03□□□□□ -0.96
RPAIN-211ENST00000572174 TOMM6Q96B49 74 aa9.03□□□□□ -0.96
RPAIN-211ENST00000572174 CHAC1Q9BUX1 264 aa9.03□□□□□ -0.96
RPAIN-211ENST00000572174 HERC2O95714 4834 aa9.02□□□□□ -0.96
RPAIN-211ENST00000572174 LINC01546A6NGU7 62 aa9.02□□□□□ -0.97
RPAIN-211ENST00000572174 F8WDY8 70 aa9.02□□□□□ -0.97
RPAIN-211ENST00000572174 RAB5BP61020 215 aa9.02□□□□□ -0.97
RPAIN-211ENST00000572174 LINC01620Q4KN68 170 aa9.02□□□□□ -0.97
RPAIN-211ENST00000572174 ERASQ7Z444 233 aa9.01□□□□□ -0.97
RPAIN-211ENST00000572174 CARD19Q96LW7 228 aa9.01□□□□□ -0.97
RPAIN-211ENST00000572174 FAM30AQ9NZY2 134 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms