RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 FAM231CP0DMU5 169 aa14.12□□□□□ -0.15
SPNS2-203ENST00000570979 RRN3P1Q2M238 152 aa14.12□□□□□ -0.15
SPNS2-203ENST00000570979 C16orf74Q96GX8 76 aa14.12□□□□□ -0.15
SPNS2-203ENST00000570979 DAZ2Q13117 558 aaKnown RBP14.11□□□□□ -0.15
SPNS2-203ENST00000570979 ETDBQ3ZM63 59 aa14.11□□□□□ -0.15
SPNS2-203ENST00000570979 PGPEP1Q9NXJ5 209 aa14.11□□□□□ -0.15
SPNS2-203ENST00000570979 PRADC1Q9BSG0 188 aa14.11□□□□□ -0.15
SPNS2-203ENST00000570979 IGLV4-69A0A075B6H9 119 aa14.1□□□□□ -0.15
SPNS2-203ENST00000570979 IGHV3-73A0A0B4J1V6 119 aa14.1□□□□□ -0.15
SPNS2-203ENST00000570979 FOXI1Q12951 378 aa14.1□□□□□ -0.15
SPNS2-203ENST00000570979 NHP2Q9NX24 153 aaKnown RBP14.1□□□□□ -0.15
SPNS2-203ENST00000570979 TRAV4A0A0B4J268 109 aa14.09□□□□□ -0.15
SPNS2-203ENST00000570979 CDIP1Q9H305 208 aa14.09□□□□□ -0.15
SPNS2-203ENST00000570979 IGHV3OR16-12A0A075B7B8 117 aa14.09□□□□□ -0.15
SPNS2-203ENST00000570979 TRGV1A0A0A0MS02 117 aa14.09□□□□□ -0.15
SPNS2-203ENST00000570979 APOMO95445 188 aa14.09□□□□□ -0.15
SPNS2-203ENST00000570979 C12orf74Q32Q52 190 aa14.09□□□□□ -0.15
SPNS2-203ENST00000570979 SPINK8P0C7L1 97 aa14.08□□□□□ -0.16
SPNS2-203ENST00000570979 TMEM170BQ5T4T1 132 aa14.08□□□□□ -0.16
SPNS2-203ENST00000570979 LINC00482Q8N8I6 264 aa14.08□□□□□ -0.16
SPNS2-203ENST00000570979 HIST1H4GQ99525 98 aa14.08□□□□□ -0.16
SPNS2-203ENST00000570979 RPL36AP83881 106 aaKnown RBP14.07□□□□□ -0.16
SPNS2-203ENST00000570979 LYRM7Q5U5X0 104 aa14.07□□□□□ -0.16
SPNS2-203ENST00000570979 MAPKAPK5-AS1Q8N8E1 139 aa14.07□□□□□ -0.16
SPNS2-203ENST00000570979 RPL36ALQ969Q0 106 aaKnown RBP14.07□□□□□ -0.16
SPNS2-203ENST00000570979 C19orf73Q9NVV2 129 aa14.07□□□□□ -0.16
SPNS2-203ENST00000570979 ZNF815PA8K554 130 aa14.06□□□□□ -0.16
SPNS2-203ENST00000570979 TIMM21Q9BVV7 248 aa14.06□□□□□ -0.16
SPNS2-203ENST00000570979 IGLV4-3A0A075B6K6 122 aa14.06□□□□□ -0.16
SPNS2-203ENST00000570979 GAGE5Q13069 117 aa14.06□□□□□ -0.16
SPNS2-203ENST00000570979 GAGE6Q13070 117 aa14.06□□□□□ -0.16
SPNS2-203ENST00000570979 Q6ZUT4 128 aa14.06□□□□□ -0.16
SPNS2-203ENST00000570979 SH2D6Q7Z4S9 175 aa14.06□□□□□ -0.16
SPNS2-203ENST00000570979 TRBV7-3A0A075B6L6 115 aa14.05□□□□□ -0.16
SPNS2-203ENST00000570979 K7ERJ3 54 aa14.05□□□□□ -0.16
SPNS2-203ENST00000570979 SCGB1D4Q6XE38 83 aa14.05□□□□□ -0.16
SPNS2-203ENST00000570979 DAZ4Q86SG3 579 aaKnown RBP14.05□□□□□ -0.16
SPNS2-203ENST00000570979 MRAPQ8TCY5 172 aa14.05□□□□□ -0.16
SPNS2-203ENST00000570979 AMELXQ99217 191 aa14.05□□□□□ -0.16
SPNS2-203ENST00000570979 DAZ3Q9NR90 486 aaKnown RBP14.05□□□□□ -0.16
SPNS2-203ENST00000570979 KRTAP10-11P60412 298 aa14.04□□□□□ -0.16
SPNS2-203ENST00000570979 C9orf66Q5T8R8 295 aa14.04□□□□□ -0.16
SPNS2-203ENST00000570979 PLEKHB2Q96CS7 222 aa14.04□□□□□ -0.16
SPNS2-203ENST00000570979 OVOL2Q9BRP0 275 aa14.04□□□□□ -0.16
SPNS2-203ENST00000570979 TTTY13Q9BZ97 58 aa14.04□□□□□ -0.16
SPNS2-203ENST00000570979 PRM2P04554 102 aa14.04□□□□□ -0.16
SPNS2-203ENST00000570979 PPDPFLQ8WWR9 84 aa14.04□□□□□ -0.16
SPNS2-203ENST00000570979 TMEM262E9PQX1 116 aa14.03□□□□□ -0.16
SPNS2-203ENST00000570979 K7EQD1 137 aa14.03□□□□□ -0.16
SPNS2-203ENST00000570979 LEPROTO15243 131 aa14.03□□□□□ -0.16
SPNS2-203ENST00000570979 Q6ZSN1 163 aa14.03□□□□□ -0.16
SPNS2-203ENST00000570979 M0QXV9 152 aa14.02□□□□□ -0.16
SPNS2-203ENST00000570979 LGALS3P17931 250 aaKnown RBP14.02□□□□□ -0.16
SPNS2-203ENST00000570979 MRPS36P82909 103 aaKnown RBP14.02□□□□□ -0.16
SPNS2-203ENST00000570979 RPL35AP18077 110 aaKnown RBP14.01□□□□□ -0.17
SPNS2-203ENST00000570979 ZNRF2Q8NHG8 242 aa14.01□□□□□ -0.17
SPNS2-203ENST00000570979 CHCHD7Q9BUK0 85 aa14.01□□□□□ -0.17
SPNS2-203ENST00000570979 TMEM223A0PJW6 202 aa14.01□□□□□ -0.17
SPNS2-203ENST00000570979 GIG44P09565 113 aaPredicted RBP14.01□□□□□ -0.17
SPNS2-203ENST00000570979 NACAE9PAV3 2078 aa14□□□□□ -0.17
SPNS2-203ENST00000570979 J3QQQ9 107 aa14□□□□□ -0.17
SPNS2-203ENST00000570979 K7EIL1 84 aa14□□□□□ -0.17
SPNS2-203ENST00000570979 DGAT2L7PQ6IED9 249 aa14□□□□□ -0.17
SPNS2-203ENST00000570979 CSNK1G2-AS1Q8NCQ2 148 aa14□□□□□ -0.17
SPNS2-203ENST00000570979 UBE2D4Q9Y2X8 147 aa14□□□□□ -0.17
SPNS2-203ENST00000570979 SRSF9Q13242 221 aaKnown RBP eCLIP13.99□□□□□ -0.17
SPNS2-203ENST00000570979 DEFB104AQ8WTQ1 72 aa13.99□□□□□ -0.17
SPNS2-203ENST00000570979 NOP10Q9NPE3 64 aaKnown RBP13.99□□□□□ -0.17
SPNS2-203ENST00000570979 TINCRA0A1B0GVN0 87 aa13.99□□□□□ -0.17
SPNS2-203ENST00000570979 SMIM9A6NGZ8 99 aa13.99□□□□□ -0.17
SPNS2-203ENST00000570979 EGFEM1PQ0D2K5 195 aa13.99□□□□□ -0.17
SPNS2-203ENST00000570979 Q6ZTI0 123 aa13.99□□□□□ -0.17
SPNS2-203ENST00000570979 ANAPC13Q9BS18 74 aa13.99□□□□□ -0.17
SPNS2-203ENST00000570979 CSDC2Q9Y534 153 aaKnown RBP13.99□□□□□ -0.17
SPNS2-203ENST00000570979 TRGV2A0A075B6R0 118 aa13.98□□□□□ -0.17
SPNS2-203ENST00000570979 TRBV6-4A0A1B0GX49 114 aa13.98□□□□□ -0.17
SPNS2-203ENST00000570979 ZFAND6Q6FIF0 208 aa13.98□□□□□ -0.17
SPNS2-203ENST00000570979 TEN1Q86WV5 123 aa13.98□□□□□ -0.17
SPNS2-203ENST00000570979 SBSPONQ8IVN8 264 aa13.98□□□□□ -0.17
SPNS2-203ENST00000570979 RNF183Q96D59 192 aa13.98□□□□□ -0.17
SPNS2-203ENST00000570979 ZNF22P17026 224 aaPredicted RBP13.97□□□□□ -0.17
SPNS2-203ENST00000570979 EMP1P54849 157 aa13.97□□□□□ -0.17
SPNS2-203ENST00000570979 H7C423 109 aa13.96□□□□□ -0.17
SPNS2-203ENST00000570979 MT-ATP8P03928 68 aa13.96□□□□□ -0.17
SPNS2-203ENST00000570979 XGP55808 180 aa13.96□□□□□ -0.17
SPNS2-203ENST00000570979 OPRPNQ99935 248 aaPredicted RBP13.96□□□□□ -0.17
SPNS2-203ENST00000570979 A0A0J9YXV3 536 aa13.96□□□□□ -0.18
SPNS2-203ENST00000570979 TRBV20-1A0A075B6N2 111 aa13.95□□□□□ -0.18
SPNS2-203ENST00000570979 Q6Q795 121 aa13.95□□□□□ -0.18
SPNS2-203ENST00000570979 TIRAPP58753 221 aa13.94□□□□□ -0.18
SPNS2-203ENST00000570979 UBE2D3P61077 147 aa13.94□□□□□ -0.18
SPNS2-203ENST00000570979 UBE2D2P62837 147 aa13.94□□□□□ -0.18
SPNS2-203ENST00000570979 SLC25A29Q8N8R3 303 aa13.94□□□□□ -0.18
SPNS2-203ENST00000570979 A0A0J9YY99 117 aa13.94□□□□□ -0.18
SPNS2-203ENST00000570979 KIR2DL5BQ8NHK3 375 aa13.94□□□□□ -0.18
SPNS2-203ENST00000570979 PLAC8L1A1L4L8 177 aa13.93□□□□□ -0.18
SPNS2-203ENST00000570979 SMCPP49901 116 aaPredicted RBP13.93□□□□□ -0.18
SPNS2-203ENST00000570979 WFDC10AQ9H1F0 79 aa13.93□□□□□ -0.18
SPNS2-203ENST00000570979 TRGV4A0A0C4DH28 118 aa13.92□□□□□ -0.18
SPNS2-203ENST00000570979 DNAH9Q9NYC9 4486 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms