RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 RNASE3P12724 160 aaKnown RBP2.53□□□□□ -2
NUP88-202ENST00000570937 EVI2AP22794 236 aa2.53□□□□□ -2
NUP88-202ENST00000570937 CRIP1P50238 77 aa2.53□□□□□ -2
NUP88-202ENST00000570937 RPL32P62910 135 aaKnown RBP2.53□□□□□ -2
NUP88-202ENST00000570937 RHOHQ15669 191 aa2.53□□□□□ -2
NUP88-202ENST00000570937 ESRGQ1W209 222 aa2.53□□□□□ -2
NUP88-202ENST00000570937 CENPWQ5EE01 88 aa2.53□□□□□ -2
NUP88-202ENST00000570937 CFAP126Q5VTH2 177 aa2.53□□□□□ -2
NUP88-202ENST00000570937 LYPD5Q6UWN5 251 aa2.53□□□□□ -2
NUP88-202ENST00000570937 ALKAL2Q6UX46 152 aa2.53□□□□□ -2
NUP88-202ENST00000570937 SLC25A29Q8N8R3 303 aa2.53□□□□□ -2
NUP88-202ENST00000570937 SFRP2Q96HF1 295 aa2.53□□□□□ -2
NUP88-202ENST00000570937 UPK3BQ9BT76 320 aa2.53□□□□□ -2
NUP88-202ENST00000570937 EIF5A2Q9GZV4 153 aaKnown RBP2.53□□□□□ -2
NUP88-202ENST00000570937 MRPS16Q9Y3D3 137 aaKnown RBP2.53□□□□□ -2
NUP88-202ENST00000570937 LINC00588Q9Y4M8 146 aa2.53□□□□□ -2
NUP88-202ENST00000570937 CSMD3Q7Z407 3707 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 TMSB15BA0A087X1C1 80 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 IGHV3-73A0A0B4J1V6 119 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 GRIFINA4D1Z8 144 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 M0R381 172 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 SIVA1O15304 175 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 OR5AL1P0C617 328 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 CACNG7P62955 275 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 FAM74A4Q5TZK3 123 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 SPANXN1Q5VSR9 72 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 KCNIP4Q6PIL6 250 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 C10orf126Q8N4M7 172 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 ZNRF2Q8NHG8 242 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 LYPD6BQ8NI32 183 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 SMDT1Q9H4I9 107 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 LY96Q9Y6Y9 160 aa2.52□□□□□ -2.01
NUP88-202ENST00000570937 DNAH1Q9P2D7 4330 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 TRBV10-1A0A0K0K1A3 114 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 TMEM218A2RU14 115 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 H7C1H1 209 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 TRGC1P0CF51 173 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 ZNF25P17030 456 aaPredicted RBP2.51□□□□□ -2.01
NUP88-202ENST00000570937 PEA15Q15121 130 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 VAMP3Q15836 100 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 FAM74A3Q4VXF1 159 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 OR10J3Q5JRS4 329 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 UQCC3Q6UW78 93 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 C6orf223Q8N319 242 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 C15orf54Q8N8G6 183 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 FER1L6-AS1Q8NA97 138 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 ATP6V0E2Q8NHE4 81 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 FAM104AQ969W3 186 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 BORCS7Q96B45 105 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 AP1S3Q96PC3 154 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 DERL1Q9BUN8 251 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 GTSF1LQ9H1H1 148 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 RPP21Q9H633 154 aaKnown RBP2.51□□□□□ -2.01
NUP88-202ENST00000570937 SPANXA1Q9NS26 97 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 URGCP-MRPS24S4R325 110 aa2.51□□□□□ -2.01
NUP88-202ENST00000570937 EPPK1P58107 5090 aaKnown RBP2.51□□□□□ -2.01
NUP88-202ENST00000570937 DYNC2H1Q8NCM8 4307 aaKnown RBP2.5□□□□□ -2.01
NUP88-202ENST00000570937 TRBV7-3A0A075B6L6 115 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 A0A0U1RRA0 63 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 C19orf71A6NCJ1 209 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 ZNF727A8MUV8 499 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 A8MWL6 223 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 C1orf196B1AJZ1 125 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 M0R143 59 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 SNAI2O43623 268 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 IGLV2-8P01709 118 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 CRYGDP07320 174 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 ELOBQ15370 118 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 ZNF56Q15929 161 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 TMEM241Q24JQ0 296 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 TMEM97Q5BJF2 176 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 LELP1Q5T871 98 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 SVBPQ8N300 66 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 Q8N9L7 120 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 OR10AG1Q8NH19 301 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 SMIM7Q9BQ49 75 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 VPS13DQ5THJ4 4388 aa2.5□□□□□ -2.01
NUP88-202ENST00000570937 TRBV20OR9-2A0A075B6H5 130 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 A0A087WX48 190 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 TRAV8-3A0A0A6YYJ7 113 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 K7ERU9 68 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 PSCAO43653 123 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 IGLC6P0CF74 106 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 NTF3P20783 257 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 RPL19P84098 196 aaKnown RBP2.49□□□□□ -2.01
NUP88-202ENST00000570937 COX19Q49B96 90 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 C5orf47Q569G3 176 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 LINC01556Q5JQF7 62 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 C10orf91Q5T1B1 145 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 LYZL1Q6UWQ5 148 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 FAM231DQ6ZW35 169 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 DAZ4Q86SG3 579 aaKnown RBP2.49□□□□□ -2.01
NUP88-202ENST00000570937 LINC01551Q86U37 167 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 ORAOV1Q8WV07 137 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 FRZBQ92765 325 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 DNAJC30Q96LL9 226 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 SAMD10Q9BYL1 202 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 DAZ3Q9NR90 486 aaKnown RBP2.49□□□□□ -2.01
NUP88-202ENST00000570937 ALMS1Q8TCU4 4167 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 BIRC6Q9NR09 4857 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms