RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 RNF5Q99942 180 aa2.57□□□□□ -2
SMG6-208ENST00000570874 ZNF355PQ9NSJ1 428 aa2.57□□□□□ -2
SMG6-208ENST00000570874 ASH1LQ9NR48 2969 aaKnown RBP2.57□□□□□ -2
SMG6-208ENST00000570874 WNK1Q9H4A3 2382 aa2.57□□□□□ -2
SMG6-208ENST00000570874 SORL1Q92673 2214 aa2.56□□□□□ -2
SMG6-208ENST00000570874 IGHV4-4A0A075B6R2 117 aa2.56□□□□□ -2
SMG6-208ENST00000570874 A6NDX4 124 aa2.56□□□□□ -2
SMG6-208ENST00000570874 B4DSR2 109 aa2.56□□□□□ -2
SMG6-208ENST00000570874 SYS1-DBNDD2H3BUS1 97 aa2.56□□□□□ -2
SMG6-208ENST00000570874 K7ERJ3 54 aa2.56□□□□□ -2
SMG6-208ENST00000570874 ATOX1O00244 68 aa2.56□□□□□ -2
SMG6-208ENST00000570874 TCL1BO95988 128 aa2.56□□□□□ -2
SMG6-208ENST00000570874 FSHBP01225 129 aa2.56□□□□□ -2
SMG6-208ENST00000570874 IGKV1-17P01599 117 aa2.56□□□□□ -2
SMG6-208ENST00000570874 IGLV2-8P01709 118 aa2.56□□□□□ -2
SMG6-208ENST00000570874 IGKCP01834 107 aa2.56□□□□□ -2
SMG6-208ENST00000570874 C3orf79P0CE67 100 aa2.56□□□□□ -2
SMG6-208ENST00000570874 CHTF8P0CG12 524 aa2.56□□□□□ -2
SMG6-208ENST00000570874 DSCR9P59020 149 aa2.56□□□□□ -2
SMG6-208ENST00000570874 KRTDAPP60985 99 aa2.56□□□□□ -2
SMG6-208ENST00000570874 LYZP61626 148 aa2.56□□□□□ -2
SMG6-208ENST00000570874 UBE2G1P62253 170 aa2.56□□□□□ -2
SMG6-208ENST00000570874 BLCAPP62952 87 aa2.56□□□□□ -2
SMG6-208ENST00000570874 UBE2L3P68036 154 aaKnown RBP2.56□□□□□ -2
SMG6-208ENST00000570874 ODF3L2Q3SX64 289 aa2.56□□□□□ -2
SMG6-208ENST00000570874 MPV17L2Q567V2 206 aa2.56□□□□□ -2
SMG6-208ENST00000570874 ADAMTSL4-AS1Q5T5F5 129 aa2.56□□□□□ -2
SMG6-208ENST00000570874 C10orf113Q5VZT2 155 aa2.56□□□□□ -2
SMG6-208ENST00000570874 LYPD1Q8N2G4 141 aa2.56□□□□□ -2
SMG6-208ENST00000570874 CSNK1G2-AS1Q8NCQ2 148 aa2.56□□□□□ -2
SMG6-208ENST00000570874 MPLKIPQ8TAP9 179 aa2.56□□□□□ -2
SMG6-208ENST00000570874 C18orf32Q8TCD1 76 aa2.56□□□□□ -2
SMG6-208ENST00000570874 MYOZ3Q8TDC0 251 aa2.56□□□□□ -2
SMG6-208ENST00000570874 DIRC1Q969H9 104 aa2.56□□□□□ -2
SMG6-208ENST00000570874 FAM104AQ969W3 186 aa2.56□□□□□ -2
SMG6-208ENST00000570874 TRGV9Q99603 122 aa2.56□□□□□ -2
SMG6-208ENST00000570874 OCR1Q9BZK8 76 aa2.56□□□□□ -2
SMG6-208ENST00000570874 TP53TG3Q9ULZ0 132 aa2.56□□□□□ -2
SMG6-208ENST00000570874 ANK3Q12955 4377 aaKnown RBP2.56□□□□□ -2
SMG6-208ENST00000570874 NBPF19A0A087WUL8 3843 aa2.56□□□□□ -2
SMG6-208ENST00000570874 NACAE9PAV3 2078 aa2.56□□□□□ -2
SMG6-208ENST00000570874 CFAP46Q8IYW2 2715 aa2.55□□□□□ -2
SMG6-208ENST00000570874 IGHV4OR15-8A0A075B7B6 117 aa2.55□□□□□ -2
SMG6-208ENST00000570874 MUC21A0A140T8X8 626 aa2.55□□□□□ -2
SMG6-208ENST00000570874 DNAJC9-AS1A6NH13 148 aa2.55□□□□□ -2
SMG6-208ENST00000570874 H3BUT2 72 aa2.55□□□□□ -2
SMG6-208ENST00000570874 BMPR1BO00238 502 aa2.55□□□□□ -2
SMG6-208ENST00000570874 NUPR1O60356 82 aa2.55□□□□□ -2
SMG6-208ENST00000570874 UBE2AP49459 152 aa2.55□□□□□ -2
SMG6-208ENST00000570874 LINC00310P59036 64 aa2.55□□□□□ -2
SMG6-208ENST00000570874 ETDBQ3ZM63 59 aa2.55□□□□□ -2
SMG6-208ENST00000570874 SETXQ7Z333 2677 aaKnown RBP2.55□□□□□ -2
SMG6-208ENST00000570874 Q8N2B8 174 aa2.55□□□□□ -2
SMG6-208ENST00000570874 NRACQ8N912 160 aa2.55□□□□□ -2
SMG6-208ENST00000570874 Q8N976 141 aa2.55□□□□□ -2
SMG6-208ENST00000570874 LINC00476Q8WZB0 136 aa2.55□□□□□ -2
SMG6-208ENST00000570874 LINC00479Q96M42 142 aa2.55□□□□□ -2
SMG6-208ENST00000570874 DSCR8Q96T75 97 aa2.55□□□□□ -2
SMG6-208ENST00000570874 CHCHD5Q9BSY4 110 aa2.55□□□□□ -2
SMG6-208ENST00000570874 HHLA3Q9XRX5 114 aa2.55□□□□□ -2
SMG6-208ENST00000570874 KLK5Q9Y337 293 aaPredicted RBP2.55□□□□□ -2
SMG6-208ENST00000570874 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.55□□□□□ -2
SMG6-208ENST00000570874 MYO18BQ8IUG5 2567 aa2.55□□□□□ -2
SMG6-208ENST00000570874 MUC4Q99102 2169 aa2.54□□□□□ -2
SMG6-208ENST00000570874 PDZD2O15018 2839 aa2.54□□□□□ -2
SMG6-208ENST00000570874 UBR5O95071 2799 aaPredicted RBP2.54□□□□□ -2
SMG6-208ENST00000570874 IGHV3-49A0A0A0MS15 119 aa2.54□□□□□ -2
SMG6-208ENST00000570874 IGHV3-74A0A0B4J1X5 117 aa2.54□□□□□ -2
SMG6-208ENST00000570874 IGHV3-66A0A0C4DH42 116 aa2.54□□□□□ -2
SMG6-208ENST00000570874 C2orf70A6NJV1 201 aa2.54□□□□□ -2
SMG6-208ENST00000570874 KRTAP16-1A8MUX0 517 aa2.54□□□□□ -2
SMG6-208ENST00000570874 H3BRN7 92 aa2.54□□□□□ -2
SMG6-208ENST00000570874 LEPROTL1O95214 131 aa2.54□□□□□ -2
SMG6-208ENST00000570874 IGHV3-11P01762 117 aa2.54□□□□□ -2
SMG6-208ENST00000570874 TRGV3P03979 118 aa2.54□□□□□ -2
SMG6-208ENST00000570874 IL4P05112 153 aa2.54□□□□□ -2
SMG6-208ENST00000570874 CTSGP08311 255 aa2.54□□□□□ -2
SMG6-208ENST00000570874 MGST1P10620 155 aaKnown RBP2.54□□□□□ -2
SMG6-208ENST00000570874 RNASE4P34096 147 aaKnown RBP2.54□□□□□ -2
SMG6-208ENST00000570874 HIST1H4AP62805 103 aaKnown RBP2.54□□□□□ -2
SMG6-208ENST00000570874 PRR4Q16378 134 aa2.54□□□□□ -2
SMG6-208ENST00000570874 C15orf32Q32M92 178 aa2.54□□□□□ -2
SMG6-208ENST00000570874 ZC2HC1BQ5TFG8 222 aa2.54□□□□□ -2
SMG6-208ENST00000570874 IGFL4Q6B9Z1 124 aa2.54□□□□□ -2
SMG6-208ENST00000570874 C18orf65Q6ZTR6 163 aa2.54□□□□□ -2
SMG6-208ENST00000570874 FP248Q71RG6 208 aaPredicted RBP2.54□□□□□ -2
SMG6-208ENST00000570874 C5orf38Q86SI9 138 aa2.54□□□□□ -2
SMG6-208ENST00000570874 C3orf56Q8N813 242 aa2.54□□□□□ -2
SMG6-208ENST00000570874 DAND5Q8N907 189 aa2.54□□□□□ -2
SMG6-208ENST00000570874 SMR3AQ99954 134 aa2.54□□□□□ -2
SMG6-208ENST00000570874 KLK15Q9H2R5 256 aa2.54□□□□□ -2
SMG6-208ENST00000570874 RPP21Q9H633 154 aaKnown RBP2.54□□□□□ -2
SMG6-208ENST00000570874 SND1-IT1Q9HBX3 110 aa2.54□□□□□ -2
SMG6-208ENST00000570874 TMEM14CQ9P0S9 112 aa2.54□□□□□ -2
SMG6-208ENST00000570874 CELSR2Q9HCU4 2923 aa2.54□□□□□ -2
SMG6-208ENST00000570874 FLNCQ14315 2725 aa2.54□□□□□ -2
SMG6-208ENST00000570874 POLQO75417 2590 aa2.54□□□□□ -2
SMG6-208ENST00000570874 SVEP1Q4LDE5 3571 aa2.53□□□□□ -2
SMG6-208ENST00000570874 CLPSL1A2RUU4 121 aa2.53□□□□□ -2
SMG6-208ENST00000570874 C19orf71A6NCJ1 209 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms