RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 CDPF1Q6NVV7 123 aa10.14□□□□□ -0.79
RAB40B-203ENST00000570676 Q8N1X5 172 aa10.14□□□□□ -0.79
RAB40B-203ENST00000570676 CHCHD5Q9BSY4 110 aa10.14□□□□□ -0.79
RAB40B-203ENST00000570676 TRAV8-6A0A0B4J262 113 aa10.13□□□□□ -0.79
RAB40B-203ENST00000570676 EREGO14944 169 aa10.13□□□□□ -0.79
RAB40B-203ENST00000570676 ESDP10768 282 aa10.13□□□□□ -0.79
RAB40B-203ENST00000570676 LINC00310P59036 64 aa10.13□□□□□ -0.79
RAB40B-203ENST00000570676 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.12□□□□□ -0.79
RAB40B-203ENST00000570676 IGKV2-29A2NJV5 120 aaPredicted RBP10.12□□□□□ -0.79
RAB40B-203ENST00000570676 UBE2L6O14933 153 aa10.12□□□□□ -0.79
RAB40B-203ENST00000570676 HSBP1O75506 76 aa10.12□□□□□ -0.79
RAB40B-203ENST00000570676 C20orf203Q8NBC4 194 aa10.12□□□□□ -0.79
RAB40B-203ENST00000570676 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
RAB40B-203ENST00000570676 NUPR1O60356 82 aa10.11□□□□□ -0.79
RAB40B-203ENST00000570676 GAGE6Q13070 117 aa10.11□□□□□ -0.79
RAB40B-203ENST00000570676 PMCHL1Q16048 86 aa10.11□□□□□ -0.79
RAB40B-203ENST00000570676 COA6Q5JTJ3 125 aaKnown RBP10.11□□□□□ -0.79
RAB40B-203ENST00000570676 TMEM18Q96B42 140 aa10.11□□□□□ -0.79
RAB40B-203ENST00000570676 IBA57-AS1B1ANH7 110 aa10.1□□□□□ -0.79
RAB40B-203ENST00000570676 TMEM262E9PQX1 116 aa10.1□□□□□ -0.79
RAB40B-203ENST00000570676 S100A6P06703 90 aa10.1□□□□□ -0.79
RAB40B-203ENST00000570676 G0S2P27469 103 aa10.1□□□□□ -0.79
RAB40B-203ENST00000570676 RPL39P62891 51 aaKnown RBP10.1□□□□□ -0.79
RAB40B-203ENST00000570676 CYSLTR1Q9Y271 337 aa10.1□□□□□ -0.79
RAB40B-203ENST00000570676 TMA7Q9Y2S6 64 aaKnown RBP10.1□□□□□ -0.79
RAB40B-203ENST00000570676 LRCOL1A6NCL2 159 aa10.09□□□□□ -0.79
RAB40B-203ENST00000570676 H7C423 109 aa10.09□□□□□ -0.79
RAB40B-203ENST00000570676 IGHV3-30P01768 117 aa10.09□□□□□ -0.79
RAB40B-203ENST00000570676 IGHV3-33P01772 117 aa10.09□□□□□ -0.79
RAB40B-203ENST00000570676 IGHV3-30-3P0DP02 117 aa10.09□□□□□ -0.79
RAB40B-203ENST00000570676 IGHV3-30-5P0DP03 117 aa10.09□□□□□ -0.79
RAB40B-203ENST00000570676 C2orf66Q6UXQ4 117 aa10.09□□□□□ -0.79
RAB40B-203ENST00000570676 FAM19A2Q8N3H0 131 aa10.09□□□□□ -0.79
RAB40B-203ENST00000570676 Q8N3U1 123 aa10.09□□□□□ -0.79
RAB40B-203ENST00000570676 A0A096LNJ9 63 aa10.08□□□□□ -0.8
RAB40B-203ENST00000570676 HBDP02042 147 aa10.08□□□□□ -0.8
RAB40B-203ENST00000570676 FGF6P10767 208 aa10.08□□□□□ -0.8
RAB40B-203ENST00000570676 KRTAP10-1P60331 282 aa10.08□□□□□ -0.8
RAB40B-203ENST00000570676 PKIAP61925 76 aa10.08□□□□□ -0.8
RAB40B-203ENST00000570676 AMMECR1LQ6DCA0 310 aa10.08□□□□□ -0.8
RAB40B-203ENST00000570676 TOMM6Q96B49 74 aa10.08□□□□□ -0.8
RAB40B-203ENST00000570676 A0A087WX48 190 aa10.07□□□□□ -0.8
RAB40B-203ENST00000570676 SMAGPQ0VAQ4 97 aa10.07□□□□□ -0.8
RAB40B-203ENST00000570676 Q9HAA7 133 aa10.07□□□□□ -0.8
RAB40B-203ENST00000570676 LINC01549A6NIU2 74 aa10.06□□□□□ -0.8
RAB40B-203ENST00000570676 XGP55808 180 aa10.06□□□□□ -0.8
RAB40B-203ENST00000570676 RBX1P62877 108 aa10.06□□□□□ -0.8
RAB40B-203ENST00000570676 MPV17L2Q567V2 206 aa10.06□□□□□ -0.8
RAB40B-203ENST00000570676 MRPL52Q86TS9 123 aaKnown RBP10.06□□□□□ -0.8
RAB40B-203ENST00000570676 UBE2D4Q9Y2X8 147 aa10.06□□□□□ -0.8
RAB40B-203ENST00000570676 PSCAO43653 123 aa10.05□□□□□ -0.8
RAB40B-203ENST00000570676 ZNF25P17030 456 aaPredicted RBP10.05□□□□□ -0.8
RAB40B-203ENST00000570676 PDZD11Q5EBL8 140 aa10.05□□□□□ -0.8
RAB40B-203ENST00000570676 DGAT2L7PQ6IED9 249 aa10.05□□□□□ -0.8
RAB40B-203ENST00000570676 Q8N976 141 aa10.05□□□□□ -0.8
RAB40B-203ENST00000570676 OR5A1Q8NGJ0 315 aa10.05□□□□□ -0.8
RAB40B-203ENST00000570676 TMEM101Q96IK0 257 aa10.05□□□□□ -0.8
RAB40B-203ENST00000570676 SCGB3A1Q96QR1 104 aa10.05□□□□□ -0.8
RAB40B-203ENST00000570676 TIMM21Q9BVV7 248 aa10.05□□□□□ -0.8
RAB40B-203ENST00000570676 SPANXA1Q9NS26 97 aa10.05□□□□□ -0.8
RAB40B-203ENST00000570676 SNRPEP62304 92 aaKnown RBP10.04□□□□□ -0.8
RAB40B-203ENST00000570676 PYGO1Q9Y3Y4 419 aa10.04□□□□□ -0.8
RAB40B-203ENST00000570676 IGLV4-60A0A075B6I1 120 aa10.03□□□□□ -0.8
RAB40B-203ENST00000570676 A0A1B0GUV1 79 aa10.03□□□□□ -0.8
RAB40B-203ENST00000570676 IGIPA6NJ69 53 aa10.03□□□□□ -0.8
RAB40B-203ENST00000570676 ERASQ7Z444 233 aa10.03□□□□□ -0.8
RAB40B-203ENST00000570676 Q8N814 137 aa10.03□□□□□ -0.8
RAB40B-203ENST00000570676 CSDC2Q9Y534 153 aaKnown RBP10.03□□□□□ -0.8
RAB40B-203ENST00000570676 LEPROTL1O95214 131 aa10.02□□□□□ -0.81
RAB40B-203ENST00000570676 FABP4P15090 132 aa10.02□□□□□ -0.81
RAB40B-203ENST00000570676 GCSHP23434 173 aa10.02□□□□□ -0.81
RAB40B-203ENST00000570676 WFDC2Q14508 124 aa10.02□□□□□ -0.81
RAB40B-203ENST00000570676 Q6ZUT4 128 aa10.02□□□□□ -0.81
RAB40B-203ENST00000570676 HIST3H2BBQ8N257 126 aa10.02□□□□□ -0.81
RAB40B-203ENST00000570676 NTN5Q8WTR8 489 aaPredicted RBP10.02□□□□□ -0.81
RAB40B-203ENST00000570676 TMEM141Q96I45 108 aa10.02□□□□□ -0.81
RAB40B-203ENST00000570676 TIMM17AQ99595 171 aa10.02□□□□□ -0.81
RAB40B-203ENST00000570676 OPRPNQ99935 248 aaPredicted RBP10.02□□□□□ -0.81
RAB40B-203ENST00000570676 IGLV4-3A0A075B6K6 122 aa10.01□□□□□ -0.81
RAB40B-203ENST00000570676 IGLV5-52A0A0A0MRZ9 124 aa10.01□□□□□ -0.81
RAB40B-203ENST00000570676 C5orf52A6NGY3 159 aa10.01□□□□□ -0.81
RAB40B-203ENST00000570676 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.01□□□□□ -0.81
RAB40B-203ENST00000570676 ATP5LO75964 103 aa10.01□□□□□ -0.81
RAB40B-203ENST00000570676 ANGP03950 147 aaKnown RBP10.01□□□□□ -0.81
RAB40B-203ENST00000570676 MRPS36P82909 103 aaKnown RBP10.01□□□□□ -0.81
RAB40B-203ENST00000570676 ZNF664Q8N3J9 261 aa10.01□□□□□ -0.81
RAB40B-203ENST00000570676 CDC42SE2Q9NRR3 84 aa10.01□□□□□ -0.81
RAB40B-203ENST00000570676 NPSP0C0P6 89 aa10□□□□□ -0.81
RAB40B-203ENST00000570676 S100A2P29034 98 aa10□□□□□ -0.81
RAB40B-203ENST00000570676 RNASE13Q5GAN3 156 aaKnown RBP10□□□□□ -0.81
RAB40B-203ENST00000570676 Q6ZN92 141 aa10□□□□□ -0.81
RAB40B-203ENST00000570676 LINC00173Q6ZV60 143 aa10□□□□□ -0.81
RAB40B-203ENST00000570676 FAM104AQ969W3 186 aa10□□□□□ -0.81
RAB40B-203ENST00000570676 HSPB8Q9UJY1 196 aa10□□□□□ -0.81
RAB40B-203ENST00000570676 KLK12Q9UKR0 248 aa10□□□□□ -0.81
RAB40B-203ENST00000570676 EPM2AB3EWF7 344 aa9.99□□□□□ -0.81
RAB40B-203ENST00000570676 LINC00269Q8N2A0 174 aa9.99□□□□□ -0.81
RAB40B-203ENST00000570676 IFI27L1Q96BM0 104 aa9.99□□□□□ -0.81
RAB40B-203ENST00000570676 TM2D2Q9BX73 214 aa9.99□□□□□ -0.81
RAB40B-203ENST00000570676 TRAV8-3A0A0A6YYJ7 113 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms