RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 P0DMU3 169 aa4.15□□□□□ -1.75
CDH13-213ENST00000569454 FAM231AP0DMU4 169 aa4.15□□□□□ -1.75
CDH13-213ENST00000569454 FAM231CP0DMU5 169 aa4.15□□□□□ -1.75
CDH13-213ENST00000569454 LGALS3P17931 250 aaKnown RBP4.15□□□□□ -1.75
CDH13-213ENST00000569454 AZU1P20160 251 aa4.15□□□□□ -1.75
CDH13-213ENST00000569454 FXYD2P54710 66 aa4.15□□□□□ -1.75
CDH13-213ENST00000569454 TCTAP57738 103 aa4.15□□□□□ -1.75
CDH13-213ENST00000569454 MRPS36P82909 103 aaKnown RBP4.15□□□□□ -1.75
CDH13-213ENST00000569454 RPL36AP83881 106 aaKnown RBP4.15□□□□□ -1.75
CDH13-213ENST00000569454 TMEM170BQ5T4T1 132 aa4.15□□□□□ -1.75
CDH13-213ENST00000569454 DGAT2L7PQ6IED9 249 aa4.15□□□□□ -1.75
CDH13-213ENST00000569454 DAZ4Q86SG3 579 aaKnown RBP4.15□□□□□ -1.75
CDH13-213ENST00000569454 C1orf158Q8N1D5 194 aa4.15□□□□□ -1.75
CDH13-213ENST00000569454 RPL36ALQ969Q0 106 aaKnown RBP4.15□□□□□ -1.75
CDH13-213ENST00000569454 AMELXQ99217 191 aa4.15□□□□□ -1.75
CDH13-213ENST00000569454 DAZ3Q9NR90 486 aaKnown RBP4.15□□□□□ -1.75
CDH13-213ENST00000569454 MRPL16Q9NX20 251 aaKnown RBP4.15□□□□□ -1.75
CDH13-213ENST00000569454 XCL2Q9UBD3 114 aa4.15□□□□□ -1.75
CDH13-213ENST00000569454 TENM3Q9P273 2699 aa4.15□□□□□ -1.75
CDH13-213ENST00000569454 TRGV1A0A0A0MS02 117 aa4.14□□□□□ -1.75
CDH13-213ENST00000569454 TINCRA0A1B0GVN0 87 aa4.14□□□□□ -1.75
CDH13-213ENST00000569454 H3BUT2 72 aa4.14□□□□□ -1.75
CDH13-213ENST00000569454 J3QQQ9 107 aa4.14□□□□□ -1.75
CDH13-213ENST00000569454 K7EQD1 137 aa4.14□□□□□ -1.75
CDH13-213ENST00000569454 LEPROTO15243 131 aa4.14□□□□□ -1.75
CDH13-213ENST00000569454 RRN3P1Q2M238 152 aa4.14□□□□□ -1.75
CDH13-213ENST00000569454 AMMECR1LQ6DCA0 310 aa4.14□□□□□ -1.75
CDH13-213ENST00000569454 MAPKAPK5-AS1Q8N8E1 139 aa4.14□□□□□ -1.75
CDH13-213ENST00000569454 C11orf44Q8N8P7 122 aa4.14□□□□□ -1.75
CDH13-213ENST00000569454 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
CDH13-213ENST00000569454 TTTY13Q9BZ97 58 aa4.14□□□□□ -1.75
CDH13-213ENST00000569454 NHP2Q9NX24 153 aaKnown RBP4.14□□□□□ -1.75
CDH13-213ENST00000569454 CSDC2Q9Y534 153 aaKnown RBP4.14□□□□□ -1.75
CDH13-213ENST00000569454 TRAV26-1A0A087WT03 109 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 TRBV6-4A0A1B0GX49 114 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 TMEM223A0PJW6 202 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 ADARB2-AS1A8MUL3 147 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 H7C423 109 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 K7ERU9 68 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 SCGB1A1P11684 91 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 ZNF22P17026 224 aaPredicted RBP4.13□□□□□ -1.75
CDH13-213ENST00000569454 SEC61GP60059 68 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 HERV-K104P63124 156 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 SRSF9Q13242 221 aaKnown RBP eCLIP4.13□□□□□ -1.75
CDH13-213ENST00000569454 Q6ZVH6 145 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 ZNRF2Q8NHG8 242 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 PHLDA1Q8WV24 401 aaPredicted RBP4.13□□□□□ -1.75
CDH13-213ENST00000569454 UBE2D4Q9Y2X8 147 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 SPCS1Q9Y6A9 102 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 MAP1AP78559 2803 aaPredicted RBP4.13□□□□□ -1.75
CDH13-213ENST00000569454 SVEP1Q4LDE5 3571 aa4.13□□□□□ -1.75
CDH13-213ENST00000569454 SONP18583 2426 aaKnown RBP4.12□□□□□ -1.75
CDH13-213ENST00000569454 HIVEP2P31629 2446 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 IGHV3OR16-12A0A075B7B8 117 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 IGHV3-73A0A0B4J1V6 119 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 A0A0J9YY99 117 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 UBE2D1P51668 147 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 HERVK_113P63121 156 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 C12orf74Q32Q52 190 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 C9orf66Q5T8R8 295 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 FAM19A3Q7Z5A8 133 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 LINC00482Q8N8I6 264 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 SLC25A29Q8N8R3 303 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 RAB37Q96AX2 223 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 OVOL2Q9BRP0 275 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 CHCHD7Q9BUK0 85 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 GTSF1LQ9H1H1 148 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 C19orf73Q9NVV2 129 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 HERC1Q15751 4861 aa4.12□□□□□ -1.75
CDH13-213ENST00000569454 PRKDCP78527 4128 aaKnown RBP4.11□□□□□ -1.75
CDH13-213ENST00000569454 AGRNO00468 2067 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 TRGV2A0A075B6R0 118 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 IGLV5-45A0A087WSX0 123 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.11□□□□□ -1.75
CDH13-213ENST00000569454 IGHV1-58A0A0C4DH39 117 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 A0A0J9YXV3 536 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 GAGE12BA1L429 117 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 SMIM9A6NGZ8 99 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 TIMM17BO60830 172 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 LY6G6DO95868 133 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 EMP1P54849 157 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 UBE2D3P61077 147 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 UBE2D2P62837 147 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 RPL24P83731 157 aaKnown RBP4.11□□□□□ -1.75
CDH13-213ENST00000569454 MTURNQ8N3F0 131 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 COPS9Q8WXC6 57 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 KRTAP4-5Q9BYR2 181 aa4.11□□□□□ -1.75
CDH13-213ENST00000569454 A0A0J9YXY3 114 aa4.1□□□□□ -1.75
CDH13-213ENST00000569454 IGLL5B9A064 214 aa4.1□□□□□ -1.75
CDH13-213ENST00000569454 GIG44P09565 113 aaPredicted RBP4.1□□□□□ -1.75
CDH13-213ENST00000569454 IGHV3-30-3P0DP02 117 aa4.1□□□□□ -1.75
CDH13-213ENST00000569454 TSPEAR-AS2P59090 65 aa4.1□□□□□ -1.75
CDH13-213ENST00000569454 Q6ZSN1 163 aa4.1□□□□□ -1.75
CDH13-213ENST00000569454 Q6ZTI0 123 aa4.1□□□□□ -1.75
CDH13-213ENST00000569454 Q6ZUT4 128 aa4.1□□□□□ -1.75
CDH13-213ENST00000569454 CSNK1G2-AS1Q8NCQ2 148 aa4.1□□□□□ -1.75
CDH13-213ENST00000569454 KIR2DL5BQ8NHK3 375 aa4.1□□□□□ -1.75
CDH13-213ENST00000569454 RNF183Q96D59 192 aa4.1□□□□□ -1.75
CDH13-213ENST00000569454 TMEM101Q96IK0 257 aa4.1□□□□□ -1.75
CDH13-213ENST00000569454 TMEM243Q9BU79 118 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms