RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 SUMO2P61956 95 aaKnown RBP5.92□□□□□ -1.46
GTF3C1-210ENST00000569394 TMEM101Q96IK0 257 aa5.92□□□□□ -1.46
GTF3C1-210ENST00000569394 PRR34Q9NV39 138 aa5.92□□□□□ -1.46
GTF3C1-210ENST00000569394 FAM30AQ9NZY2 134 aa5.92□□□□□ -1.46
GTF3C1-210ENST00000569394 A0A1B0GUV1 79 aa5.91□□□□□ -1.46
GTF3C1-210ENST00000569394 A0A1B0GW15 77 aa5.91□□□□□ -1.46
GTF3C1-210ENST00000569394 A0A1B0GXF2 115 aa5.91□□□□□ -1.46
GTF3C1-210ENST00000569394 C7orf77A4D0Y5 90 aa5.91□□□□□ -1.46
GTF3C1-210ENST00000569394 CDK2AP2O75956 126 aa5.91□□□□□ -1.46
GTF3C1-210ENST00000569394 S100A8P05109 93 aa5.91□□□□□ -1.46
GTF3C1-210ENST00000569394 PRSS1P07477 247 aa5.91□□□□□ -1.46
GTF3C1-210ENST00000569394 DGAT2L7PQ6IED9 249 aa5.91□□□□□ -1.46
GTF3C1-210ENST00000569394 UQCC3Q6UW78 93 aa5.91□□□□□ -1.46
GTF3C1-210ENST00000569394 OR5A1Q8NGJ0 315 aa5.91□□□□□ -1.46
GTF3C1-210ENST00000569394 NTN5Q8WTR8 489 aaPredicted RBP5.91□□□□□ -1.46
GTF3C1-210ENST00000569394 hDV102S1A0JD36 115 aa5.9□□□□□ -1.46
GTF3C1-210ENST00000569394 ESDP10768 282 aa5.9□□□□□ -1.46
GTF3C1-210ENST00000569394 XCL1P47992 114 aa5.9□□□□□ -1.46
GTF3C1-210ENST00000569394 XGP55808 180 aa5.9□□□□□ -1.46
GTF3C1-210ENST00000569394 RPL39P62891 51 aaKnown RBP5.9□□□□□ -1.46
GTF3C1-210ENST00000569394 KIAA1644Q3SXP7 199 aa5.9□□□□□ -1.46
GTF3C1-210ENST00000569394 HIGD2BQ4VC39 106 aa5.9□□□□□ -1.46
GTF3C1-210ENST00000569394 KRTAP26-1Q6PEX3 210 aa5.9□□□□□ -1.46
GTF3C1-210ENST00000569394 TMEM136Q6ZRR5 245 aa5.9□□□□□ -1.46
GTF3C1-210ENST00000569394 CHCHD10Q8WYQ3 142 aaPredicted RBP5.9□□□□□ -1.46
GTF3C1-210ENST00000569394 PRELID3AQ96N28 172 aa5.9□□□□□ -1.46
GTF3C1-210ENST00000569394 KIR2DL4Q99706 377 aa5.9□□□□□ -1.46
GTF3C1-210ENST00000569394 TRBV27A0A0K0K1C4 114 aa5.89□□□□□ -1.47
GTF3C1-210ENST00000569394 LINC00862A6NCI5 91 aa5.89□□□□□ -1.47
GTF3C1-210ENST00000569394 PPP1R17O96001 155 aa5.89□□□□□ -1.47
GTF3C1-210ENST00000569394 ATP5L2Q7Z4Y8 100 aa5.89□□□□□ -1.47
GTF3C1-210ENST00000569394 LINC00526Q96FQ7 95 aa5.89□□□□□ -1.47
GTF3C1-210ENST00000569394 IMMP2LQ96T52 175 aa5.89□□□□□ -1.47
GTF3C1-210ENST00000569394 OPRPNQ99935 248 aaPredicted RBP5.89□□□□□ -1.47
GTF3C1-210ENST00000569394 RPS10P5Q9NQ39 176 aa5.89□□□□□ -1.47
GTF3C1-210ENST00000569394 TRAV8-4A0A0B4J246 113 aa5.88□□□□□ -1.47
GTF3C1-210ENST00000569394 H7C423 109 aa5.88□□□□□ -1.47
GTF3C1-210ENST00000569394 CCL25O15444 150 aa5.88□□□□□ -1.47
GTF3C1-210ENST00000569394 PLA2G1BP04054 148 aaKnown RBP5.88□□□□□ -1.47
GTF3C1-210ENST00000569394 ORMDL3Q8N138 153 aa5.88□□□□□ -1.47
GTF3C1-210ENST00000569394 ZNF664Q8N3J9 261 aa5.88□□□□□ -1.47
GTF3C1-210ENST00000569394 SMIM2Q9BVW6 85 aa5.88□□□□□ -1.47
GTF3C1-210ENST00000569394 SEC11CQ9BY50 192 aa5.88□□□□□ -1.47
GTF3C1-210ENST00000569394 CTDSP1Q9GZU7 261 aa5.88□□□□□ -1.47
GTF3C1-210ENST00000569394 TRAV13-1A0A0B4J241 112 aa5.87□□□□□ -1.47
GTF3C1-210ENST00000569394 LINC00959A0A1B0GUT2 108 aa5.87□□□□□ -1.47
GTF3C1-210ENST00000569394 APOC3P02656 99 aa5.87□□□□□ -1.47
GTF3C1-210ENST00000569394 RAB5AP20339 215 aa5.87□□□□□ -1.47
GTF3C1-210ENST00000569394 MALP21145 153 aa5.87□□□□□ -1.47
GTF3C1-210ENST00000569394 SS18Q15532 418 aa5.87□□□□□ -1.47
GTF3C1-210ENST00000569394 C14orf177Q52M58 125 aa5.87□□□□□ -1.47
GTF3C1-210ENST00000569394 Q6ZUT4 128 aa5.87□□□□□ -1.47
GTF3C1-210ENST00000569394 C20orf78Q9BR46 151 aa5.87□□□□□ -1.47
GTF3C1-210ENST00000569394 CDC42SE2Q9NRR3 84 aa5.87□□□□□ -1.47
GTF3C1-210ENST00000569394 UBE2D4Q9Y2X8 147 aa5.87□□□□□ -1.47
GTF3C1-210ENST00000569394 DNAH8Q96JB1 4490 aa5.87□□□□□ -1.47
GTF3C1-210ENST00000569394 TRBV24-1A0A075B6N3 115 aa5.86□□□□□ -1.47
GTF3C1-210ENST00000569394 ZNF25P17030 456 aaPredicted RBP5.86□□□□□ -1.47
GTF3C1-210ENST00000569394 S100PP25815 95 aa5.86□□□□□ -1.47
GTF3C1-210ENST00000569394 Q8N1X5 172 aa5.86□□□□□ -1.47
GTF3C1-210ENST00000569394 DPH3Q96FX2 82 aa5.86□□□□□ -1.47
GTF3C1-210ENST00000569394 MAP1LC3AQ9H492 121 aa5.86□□□□□ -1.47
GTF3C1-210ENST00000569394 ABCA13Q86UQ4 5058 aa5.86□□□□□ -1.47
GTF3C1-210ENST00000569394 EPM2AB3EWF7 344 aa5.85□□□□□ -1.47
GTF3C1-210ENST00000569394 PPBPP02775 128 aa5.85□□□□□ -1.47
GTF3C1-210ENST00000569394 SLPIP03973 132 aa5.85□□□□□ -1.47
GTF3C1-210ENST00000569394 ZC2HC1BQ5TFG8 222 aa5.85□□□□□ -1.47
GTF3C1-210ENST00000569394 Q5VSD8 79 aa5.85□□□□□ -1.47
GTF3C1-210ENST00000569394 C15orf56Q8N910 161 aa5.85□□□□□ -1.47
GTF3C1-210ENST00000569394 TMEM18Q96B42 140 aa5.85□□□□□ -1.47
GTF3C1-210ENST00000569394 FOXI1Q12951 378 aa5.84□□□□□ -1.47
GTF3C1-210ENST00000569394 SCXQ7RTU7 201 aa5.84□□□□□ -1.47
GTF3C1-210ENST00000569394 C5orf38Q86SI9 138 aa5.84□□□□□ -1.47
GTF3C1-210ENST00000569394 MRPL52Q86TS9 123 aaKnown RBP5.84□□□□□ -1.47
GTF3C1-210ENST00000569394 FAT1Q14517 4588 aa5.84□□□□□ -1.48
GTF3C1-210ENST00000569394 TGIF2-C20orf24A0A0A6YYL0 155 aa5.83□□□□□ -1.48
GTF3C1-210ENST00000569394 PHOX2AO14813 284 aa5.83□□□□□ -1.48
GTF3C1-210ENST00000569394 CHTF8P0CG12 524 aa5.83□□□□□ -1.48
GTF3C1-210ENST00000569394 IFI27P40305 119 aaPredicted RBP5.83□□□□□ -1.48
GTF3C1-210ENST00000569394 SMAGPQ0VAQ4 97 aa5.83□□□□□ -1.48
GTF3C1-210ENST00000569394 CFAP161Q6P656 301 aa5.83□□□□□ -1.48
GTF3C1-210ENST00000569394 CARHSP1Q9Y2V2 147 aaKnown RBP5.83□□□□□ -1.48
GTF3C1-210ENST00000569394 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.83□□□□□ -1.48
GTF3C1-210ENST00000569394 PANO1I0J062 215 aa5.82□□□□□ -1.48
GTF3C1-210ENST00000569394 RPL32P62910 135 aaKnown RBP5.82□□□□□ -1.48
GTF3C1-210ENST00000569394 FABP9Q0Z7S8 132 aa5.82□□□□□ -1.48
GTF3C1-210ENST00000569394 C10orf91Q5T1B1 145 aa5.82□□□□□ -1.48
GTF3C1-210ENST00000569394 SLC7A5P1Q8MH63 180 aa5.82□□□□□ -1.48
GTF3C1-210ENST00000569394 Q8N8P6 123 aa5.82□□□□□ -1.48
GTF3C1-210ENST00000569394 C9orf163Q8N9P6 203 aa5.82□□□□□ -1.48
GTF3C1-210ENST00000569394 CIRBP-AS1Q8TBR5 109 aa5.82□□□□□ -1.48
GTF3C1-210ENST00000569394 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.81□□□□□ -1.48
GTF3C1-210ENST00000569394 IGKV2-24A0A0C4DH68 120 aa5.81□□□□□ -1.48
GTF3C1-210ENST00000569394 IFITM10A6NMD0 228 aa5.81□□□□□ -1.48
GTF3C1-210ENST00000569394 COX6A2Q02221 97 aa5.81□□□□□ -1.48
GTF3C1-210ENST00000569394 RHEBQ15382 184 aa5.81□□□□□ -1.48
GTF3C1-210ENST00000569394 NDUFA5Q16718 116 aa5.81□□□□□ -1.48
GTF3C1-210ENST00000569394 CD164L2Q6UWJ8 174 aa5.81□□□□□ -1.48
GTF3C1-210ENST00000569394 PRSS3P2Q8NHM4 247 aa5.81□□□□□ -1.48
GTF3C1-210ENST00000569394 FAM104AQ969W3 186 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms